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Carg13329 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13329
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 31
Genome locationCarg_Chr07:6483218..6491289
RNA-Seq ExpressionCarg13329
SyntenyCarg13329
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595449.1 hypothetical protein SDJN03_12002, partial [Cucurbita argyrosperma subsp. sororia]8.5e-3294.94Show/hide
Query:  MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKL
        MGFMKLCLCLLLMVV AAAAAPHSSAFFGG+TPAELTEDDR+LLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKK+
Subjt:  MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKL

KAG7027448.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-100100Show/hide
Query:  MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKLCLCLLLMVVAAAPPYSYAAPD
        MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKLCLCLLLMVVAAAPPYSYAAPD
Subjt:  MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKLCLCLLLMVVAAAPPYSYAAPD

Query:  YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFTD
        YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFTD
Subjt:  YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFTD

XP_022925244.1 protein RALF-like 31 [Cucurbita moschata]3.2e-55100Show/hide
Query:  KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG
        KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG
Subjt:  KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG

Query:  CARFTD
        CARFTD
Subjt:  CARFTD

XP_022927734.1 protein RALF-like 4 [Cucurbita moschata]6.8e-2958.54Show/hide
Query:  MRRKKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        M   KLCL LL ++   APP S+A  +             Y+FFGG +   +TED RR LFQYG+   NK  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MRRKKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

XP_022927735.1 protein RALF-like 4 [Cucurbita moschata]3.0e-2957.72Show/hide
Query:  MRRKKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        M   KLCL LLL+    +PP+S+A             +  Y+FFGG +   +TED RR LFQYG+   N+  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MRRKKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A6J1EBL1 protein RALF-like 311.6e-55100Show/hide
Query:  KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG
        KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG
Subjt:  KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG

Query:  CARFTD
        CARFTD
Subjt:  CARFTD

A0A6J1EIG3 rapid alkalinization factor 23-like3.4e-2658.2Show/hide
Query:  MRRKKLCLCLLLMVVAAAP--------PYSYAAPD----YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRK
        M   K+ L LLL+  A AP         +S +  D    Y+FFGG +   +TED RR LFQYG+   NK  R+R+LSY AL+ NNIPCGRRG+SYYDC+K
Subjt:  MRRKKLCLCLLLMVVAAAP--------PYSYAAPD----YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRK

Query:  RRRINPYRRGCTAITGCARFTD
        RRRINPYRRGC AITGCARFTD
Subjt:  RRRINPYRRGCTAITGCARFTD

A0A6J1EIU0 protein RALF-like 43.3e-2958.54Show/hide
Query:  MRRKKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        M   KLCL LL ++   APP S+A  +             Y+FFGG +   +TED RR LFQYG+   NK  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MRRKKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

A0A6J1EPT5 protein RALF-like 41.5e-2957.72Show/hide
Query:  MRRKKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        M   KLCL LLL+    +PP+S+A             +  Y+FFGG +   +TED RR LFQYG+   N+  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MRRKKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

A0A6J1JL71 protein RALF-like 48.9e-2757.38Show/hide
Query:  MRRKKLCLCLLLMVVAAAP--------PYSYAAPD----YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRK
        M   K+CL LLL+    AP         Y  +  D    Y+FFGG +   +TED RR LFQYG+   N   R+R+L+Y AL+ NNIPCGRRGSSYYDC+K
Subjt:  MRRKKLCLCLLLMVVAAAP--------PYSYAAPD----YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRK

Query:  RRRINPYRRGCTAITGCARFTD
        RRRINPYRRGC AITGCARFTD
Subjt:  RRRINPYRRGCTAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 198.3e-1468Show/hide
Query:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFT
        RR Y+SY AL  NN+PC RRG SYYDC+KR+R NPYRRGC+ IT C R T
Subjt:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFT

Q8L9P8 Protein RALF-like 335.6e-1058.7Show/hide
Query:  RYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        +Y+SY AL  N +PC RRG+SYY+CR+  + NPY RGC+AIT C R
Subjt:  RYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR

Q945T0 Rapid alkalinization factor2.8e-0955.56Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGC
        ++Y+SY AL  N++PC RRG+SYY+C+   + NPY RGC+AIT C
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGC

Q9FZA0 Protein RALF-like 41.3e-1470.83Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARF
        RRY+ Y+AL  NN+PC RRG SYYDC+KRRR NPYRRGC+AIT C R+
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARF

Q9LUS7 Rapid alkalinization factor 235.1e-1163.83Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        RRY+SY AL  N IPC RRG+SYY+CR+  + NPY RGC+AIT C R
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 49.1e-1670.83Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARF
        RRY+ Y+AL  NN+PC RRG SYYDC+KRRR NPYRRGC+AIT C R+
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARF

AT2G33775.1 ralf-like 195.9e-1568Show/hide
Query:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFT
        RR Y+SY AL  NN+PC RRG SYYDC+KR+R NPYRRGC+ IT C R T
Subjt:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFT

AT3G05490.1 ralf-like 222.6e-1050Show/hide
Query:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        +++Y+SY A+  N++PC RRG+SYY+C++  + NPY RGC+ IT C R
Subjt:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR

AT3G16570.1 rapid alkalinization factor 233.6e-1263.83Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        RRY+SY AL  N IPC RRG+SYY+CR+  + NPY RGC+AIT C R
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR

AT4G15800.1 ralf-like 334.0e-1158.7Show/hide
Query:  RYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        +Y+SY AL  N +PC RRG+SYY+CR+  + NPY RGC+AIT C R
Subjt:  RYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCATGAAGCTCTGCCTATGTCTCCTCCTCATGGTTGTCGCCGCCGCGGCCGCCGCCCCACATTCCTCCGCCTTCTTCGGCGGATACACACCAGCAGAGTTGAC
GGAAGATGATCGACGGCTACTTTTCCAATACAAATACGACTGGAAGTTGTCTCGTAGAAAGCATTTAAACTACAAAGCGCATCGCGACAGCTCTTACTATGAACGCAGGA
TGCGAAGGAAGAAGCTCTGCCTATGTCTCCTCCTCATGGTTGTCGCCGCCGCCCCTCCATATTCCTACGCCGCTCCTGACTACGCCTTCTTCGGCGGATATGCACCAGCA
CAGTTGACAGAAGATGGTCGACGGCTACTTTTCCAATACGGATACGACAGGACAAACAAGATGTATCGTAGAAGGTATTTAAGCTATGAGGCGCTTACGTTTAACAATAT
ACCTTGCGGCCGTCGTGGCAGCTCTTACTATGACTGCAGGAAGCGAAGGAGGATCAACCCTTATCGCCGTGGCTGCACTGCCATCACCGGCTGCGCTCGATTCACCGATT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCATGAAGCTCTGCCTATGTCTCCTCCTCATGGTTGTCGCCGCCGCGGCCGCCGCCCCACATTCCTCCGCCTTCTTCGGCGGATACACACCAGCAGAGTTGAC
GGAAGATGATCGACGGCTACTTTTCCAATACAAATACGACTGGAAGTTGTCTCGTAGAAAGCATTTAAACTACAAAGCGCATCGCGACAGCTCTTACTATGAACGCAGGA
TGCGAAGGAAGAAGCTCTGCCTATGTCTCCTCCTCATGGTTGTCGCCGCCGCCCCTCCATATTCCTACGCCGCTCCTGACTACGCCTTCTTCGGCGGATATGCACCAGCA
CAGTTGACAGAAGATGGTCGACGGCTACTTTTCCAATACGGATACGACAGGACAAACAAGATGTATCGTAGAAGGTATTTAAGCTATGAGGCGCTTACGTTTAACAATAT
ACCTTGCGGCCGTCGTGGCAGCTCTTACTATGACTGCAGGAAGCGAAGGAGGATCAACCCTTATCGCCGTGGCTGCACTGCCATCACCGGCTGCGCTCGATTCACCGATT
GA
Protein sequenceShow/hide protein sequence
MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPA
QLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFTD