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Carg13380 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13380
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncytochrome c oxidase subunit 5C-like
Genome locationCarg_Chr08:2447877..2449252
RNA-Seq ExpressionCarg13380
SyntenyCarg13380
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593239.1 putative cytochrome c oxidase subunit 5C-3, partial [Cucurbita argyrosperma subsp. sororia]9.5e-2696.88Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

KAG7025590.1 Cytochrome c oxidase subunit 5C, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-38100Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEKEGKGEDRGEAKYKTMKEAIEE
        MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEKEGKGEDRGEAKYKTMKEAIEE
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEKEGKGEDRGEAKYKTMKEAIEE

XP_022960527.1 probable cytochrome c oxidase subunit 5C-3 [Cucurbita moschata]9.5e-2696.88Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

XP_023004713.1 cytochrome c oxidase subunit 5C-like [Cucurbita maxima]2.1e-2595.31Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MAAG+VAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

XP_023548933.1 cytochrome c oxidase subunit 5C-like [Cucurbita pepo subsp. pepo]6.1e-2593.75Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MAAG+VAHVTLKGPSVVKEILT MGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

TrEMBL top hitse value%identityAlignment
A0A6J1D0G3 cytochrome c oxidase subunit 5C-like1.9e-2492.06Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQE
        M AG+VAHVTLKGPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQE

A0A6J1GMY7 cytochrome c oxidase subunit 5C-like1.5e-2492.19Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MAAG+VAHVTLKGPSVVKEIL  MGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

A0A6J1H7N9 probable cytochrome c oxidase subunit 5C-34.6e-2696.88Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

A0A6J1JM28 cytochrome c oxidase subunit 5C-like1.5e-2492.19Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MAAG+VAHVTLKGPSVVKEIL  MGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

A0A6J1L0D4 cytochrome c oxidase subunit 5C-like1.0e-2595.31Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MAAG+VAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

SwissProt top hitse value%identityAlignment
Q42841 Cytochrome c oxidase subunit 5C3.1e-1968.25Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQE
        MA G+VAH TLKGPSVVKEI   + + L AG  WKMH WNEQRK R+FYD+LEKG+I VVV+E
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQE

Q8VY40 Cytochrome c oxidase subunit 5C-15.8e-1868.25Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQE
        M  G+VAH  LKGPS VKE++    + L AG  WKMH WNEQRK RAFYDLLEKGEI VVVQE
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQE

Q9FLK2 Probable cytochrome c oxidase subunit 5C-38.9e-1967.19Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MA  K+AH TLKGPSVVKE++  + + L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

Q9LZQ0 Cytochrome c oxidase subunit 5C-21.2e-1867.19Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MA  KVAH TLKGPSVVKE++  + + L AG  WKMH WNEQRK R FYDLLE+GEIGVV  E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

Q9SXX7 Cytochrome c oxidase subunit 5C5.2e-1966.67Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQE
        MA G++AH TLKGPSVVKEI   + + L AG  WKMH WNEQRK R+FYD+LEKG+I VVV+E
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQE

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein5.4e-1965.62Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MA  KVAH TLKGPSVVKE+   + + L AG  WKMH WNEQRK R FYDLLE+GEI VV  E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein6.3e-2067.19Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MA  K+AH TLKGPSVVKE++  + + L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein6.3e-2067.19Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MA  K+AH TLKGPSVVKE++  + + L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein6.3e-2067.19Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MA  K+AH TLKGPSVVKE++  + + L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK

AT5G61310.4 Cytochrome c oxidase subunit Vc family protein6.3e-2067.19Show/hide
Query:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK
        MA  K+AH TLKGPSVVKE++  + + L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E+
Subjt:  MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGGTAAGGTGGCTCATGTCACACTTAAAGGACCGAGTGTCGTCAAGGAGATATTGACAGCAATGGGTGTTGCTCTGTTTGCTGGTAGCTTTTGGAAAATGCA
TCAATGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATCTACTGGAGAAGGGTGAGATCGGTGTCGTTGTTCAGGAGAAAGAAGGAAAAGGTGAAGACAGGGGCGAAG
CTAAGTATAAAACAATGAAAGAAGCTATTGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTGGTAAGGTGGCTCATGTCACACTTAAAGGACCGAGTGTCGTCAAGGAGATATTGACAGCAATGGGTGTTGCTCTGTTTGCTGGTAGCTTTTGGAAAATGCA
TCAATGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATCTACTGGAGAAGGGTGAGATCGGTGTCGTTGTTCAGGAGAAAGAAGGAAAAGGTGAAGACAGGGGCGAAG
CTAAGTATAAAACAATGAAAGAAGCTATTGAGGAATAG
Protein sequenceShow/hide protein sequence
MAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVQEKEGKGEDRGEAKYKTMKEAIEE