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Carg13402 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13402
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NIM1-INTERACTING 1
Genome locationCarg_Chr08:2587900..2588289
RNA-Seq ExpressionCarg13402
SyntenyCarg13402
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593261.1 hypothetical protein SDJN03_12737, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5697.67Show/hide
Query:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
        MEKQSLKTTGKRVASAAVDG  EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
Subjt:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE

Query:  EAAAAAIATAKKKKKVKNEEDILDLNLSL
        EAAAAAI TAKKKKKVKNEEDILDLNLSL
Subjt:  EAAAAAIATAKKKKKVKNEEDILDLNLSL

KAG7025612.1 hypothetical protein SDJN02_12109, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-59100Show/hide
Query:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
        MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
Subjt:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE

Query:  EAAAAAIATAKKKKKVKNEEDILDLNLSL
        EAAAAAIATAKKKKKVKNEEDILDLNLSL
Subjt:  EAAAAAIATAKKKKKVKNEEDILDLNLSL

XP_022960173.1 protein NIM1-INTERACTING 1 [Cucurbita moschata]1.9e-5494.74Show/hide
Query:  MEKQSLKTTGKRVAS----AAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG
        MEKQSLKTTGKRVAS    AAVDG  EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGC+GEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG
Subjt:  MEKQSLKTTGKRVAS----AAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG

Query:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
Subjt:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL

XP_023004697.1 protein NIM1-INTERACTING 1 [Cucurbita maxima]1.9e-4989.15Show/hide
Query:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
        MEKQSLKTTGKRVA+A VD EEE+EEEMKMEAFF LVRNFKEMRDQRRKELMI C+GEKAAAAEMRK+KMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
Subjt:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE

Query:  EAAAAAIATAKKKKKVKNEEDILDLNLSL
        EAAAA      KKKKVKNEEDILDLNLSL
Subjt:  EAAAAAIATAKKKKKVKNEEDILDLNLSL

XP_023514605.1 protein NIM1-INTERACTING 1 [Cucurbita pepo subsp. pepo]2.6e-5193.02Show/hide
Query:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
        MEKQSLK TGKRVA AAVDG EEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGC+GEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQ+RGPAKE
Subjt:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE

Query:  EAAAAAIATAKKKKKVKNEEDILDLNLSL
        EAAAA    AKKKKKVKNEEDILDLNLSL
Subjt:  EAAAAAIATAKKKKKVKNEEDILDLNLSL

TrEMBL top hitse value%identityAlignment
A0A0A0K5V7 Uncharacterized protein3.8e-1650.36Show/hide
Query:  GKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGC--NGEKAAAAEMRKRKMKT---VENRSAWIPRFEREDFDEEFQVRGP-------
        GK   S     E+  E+E +ME FFALVR+ KEMRDQRRKEL IG     E+ AA E R+++M+    VENRS WIP+FEREDFDEEFQ           
Subjt:  GKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGC--NGEKAAAAEMRKRKMKT---VENRSAWIPRFEREDFDEEFQVRGP-------

Query:  --AKEEAAAAAIATA---KKKKKVKNEEDILDLNLSL
           K +  AA+  T    K KKKVKN +  LDLNL+L
Subjt:  --AKEEAAAAAIATA---KKKKKVKNEEDILDLNLSL

A0A6J1DAZ5 protein NIM1-INTERACTING 17.4e-2057.85Show/hide
Query:  EEEEEEMKMEAFFALVRNFKEMRDQRRKEL--MIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGP----------AKEEAAAAAI-A
        EEEEEEMKMEAFFAL+RNFKEMRD+RRKEL  MIG  GE     E +++KMKT    S WIP F REDFDE+FQVRGP           KE+     + A
Subjt:  EEEEEEMKMEAFFALVRNFKEMRDQRRKEL--MIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGP----------AKEEAAAAAI-A

Query:  TAKKKKKVKNEEDILDLNLSL
           KKK +KN+E+ LDLNL+L
Subjt:  TAKKKKKVKNEEDILDLNLSL

A0A6J1H831 protein NIM1-INTERACTING 19.3e-5594.74Show/hide
Query:  MEKQSLKTTGKRVAS----AAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG
        MEKQSLKTTGKRVAS    AAVDG  EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGC+GEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG
Subjt:  MEKQSLKTTGKRVAS----AAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG

Query:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
Subjt:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL

A0A6J1JVD5 uncharacterized protein LOC1114881892.6e-1754.62Show/hide
Query:  EEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKR--KMKTVENRSAWIPRFEREDFDEEFQVRGPAKE---------EAAAAAIATA
        EEEEEE++ME F+ALVRNFKE+RD+ RKE++ G  G++ AA + RKR    +TV+N+S+WI RFEREDFDE+ QV G A E         E    A A  
Subjt:  EEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKR--KMKTVENRSAWIPRFEREDFDEEFQVRGPAKE---------EAAAAAIATA

Query:  KKKKKVKNEEDILDLNLSL
        KK+KKV +  D LDLNLSL
Subjt:  KKKKKVKNEEDILDLNLSL

A0A6J1KR57 protein NIM1-INTERACTING 19.0e-5089.15Show/hide
Query:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
        MEKQSLKTTGKRVA+A VD EEE+EEEMKMEAFF LVRNFKEMRDQRRKELMI C+GEKAAAAEMRK+KMKTVENRSAWIPRFEREDFDEEFQVRGPAKE
Subjt:  MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKE

Query:  EAAAAAIATAKKKKKVKNEEDILDLNLSL
        EAAAA      KKKKVKNEEDILDLNLSL
Subjt:  EAAAAAIATAKKKKKVKNEEDILDLNLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02450.1 NIM1-interacting 15.7e-0429.82Show/hide
Query:  EEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDE-EFQVRGP----AKEEAAAAAIATAKKKKK
        +EEEEEE K++ FF L+++++E R +RR+EL        A  + + +RK    E     +P F+ EDF +    ++ P    +  +     +   + + +
Subjt:  EEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDE-EFQVRGP----AKEEAAAAAIATAKKKKK

Query:  VKNEEDILDLNLSL
         +NE+  LDLNL+L
Subjt:  VKNEEDILDLNLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGCAGAGCTTGAAGACGACGGGGAAGAGAGTGGCTTCCGCCGCCGTCGACGGAGAGGAGGAGGAGGAGGAGGAGATGAAGATGGAGGCGTTCTTTGCTCTGGT
GAGGAATTTCAAGGAAATGCGAGATCAGCGGAGGAAGGAGTTGATGATCGGCTGCAACGGCGAGAAAGCGGCAGCGGCGGAGATGAGGAAGAGGAAGATGAAGACGGTGG
AGAATCGGTCGGCGTGGATTCCGAGGTTTGAAAGAGAGGATTTCGATGAGGAGTTTCAGGTGAGAGGTCCGGCGAAGGAAGAGGCGGCGGCGGCGGCGATCGCGACGGCG
AAGAAGAAGAAGAAAGTAAAGAACGAAGAGGATATTTTGGATCTTAATCTGTCTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGCAGAGCTTGAAGACGACGGGGAAGAGAGTGGCTTCCGCCGCCGTCGACGGAGAGGAGGAGGAGGAGGAGGAGATGAAGATGGAGGCGTTCTTTGCTCTGGT
GAGGAATTTCAAGGAAATGCGAGATCAGCGGAGGAAGGAGTTGATGATCGGCTGCAACGGCGAGAAAGCGGCAGCGGCGGAGATGAGGAAGAGGAAGATGAAGACGGTGG
AGAATCGGTCGGCGTGGATTCCGAGGTTTGAAAGAGAGGATTTCGATGAGGAGTTTCAGGTGAGAGGTCCGGCGAAGGAAGAGGCGGCGGCGGCGGCGATCGCGACGGCG
AAGAAGAAGAAGAAAGTAAAGAACGAAGAGGATATTTTGGATCTTAATCTGTCTCTGTAG
Protein sequenceShow/hide protein sequence
MEKQSLKTTGKRVASAAVDGEEEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCNGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKEEAAAAAIATA
KKKKKVKNEEDILDLNLSL