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Carg13412 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13412
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlutamine synthetase
Genome locationCarg_Chr08:2647352..2652920
RNA-Seq ExpressionCarg13412
SyntenyCarg13412
Gene Ontology termsGO:0006542 - glutamine biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004356 - glutamate-ammonia ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR027302 - Glutamine synthetase, N-terminal conserved site
IPR036651 - Glutamine synthetase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593271.1 hypothetical protein SDJN03_12747, partial [Cucurbita argyrosperma subsp. sororia]1.5e-43100Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

KAG7025622.1 hypothetical protein SDJN02_12119 [Cucurbita argyrosperma subsp. argyrosperma]8.5e-124100Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNILARLLLSIDVFL
        MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNILARLLLSIDVFL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNILARLLLSIDVFL

Query:  NTIYAFGTLGLPDDLELVRLGKDCIRRTWAHGGGVMSCEITKSCNRRWPRPLVASFEANWIASWMGRAVEFRWAPGLQRLPVFSGARQFKPGCDRVVVAL
        NTIYAFGTLGLPDDLELVRLGKDCIRRTWAHGGGVMSCEITKSCNRRWPRPLVASFEANWIASWMGRAVEFRWAPGLQRLPVFSGARQFKPGCDRVVVAL
Subjt:  NTIYAFGTLGLPDDLELVRLGKDCIRRTWAHGGGVMSCEITKSCNRRWPRPLVASFEANWIASWMGRAVEFRWAPGLQRLPVFSGARQFKPGCDRVVVAL

Query:  FRLYRGYWHANYL
        FRLYRGYWHANYL
Subjt:  FRLYRGYWHANYL

XP_022960251.1 glutamine synthetase nodule isozyme-like isoform X1 [Cucurbita moschata]7.3e-4398.88Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

XP_022960252.1 glutamine synthetase nodule isozyme-like isoform X2 [Cucurbita moschata]7.3e-4398.88Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

XP_023515062.1 glutamine synthetase nodule isozyme-like isoform X2 [Cucurbita pepo subsp. pepo]7.3e-4398.88Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

TrEMBL top hitse value%identityAlignment
A0A1S3CFV7 Glutamine synthetase1.9e-4193.26Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNLTD+T+KIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGD+SEVI+YPQA+FKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

A0A6J1H6X7 Glutamine synthetase3.5e-4398.88Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

A0A6J1H745 Glutamine synthetase3.5e-4398.88Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

A0A6J1KQU5 Glutamine synthetase1.1e-4196.63Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPG VTDPAKLP+WNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

A0A6J1L001 Glutamine synthetase1.1e-4196.63Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPG VTDPAKLP+WNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

SwissProt top hitse value%identityAlignment
P04771 Glutamine synthetase PR-21.3e-4289.89Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNL++ST+KIIAEY+W+GGSG+DLRSKARTLPGPV DPAKLPKWNYDGSST+QAPGDDSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

P07694 Glutamine synthetase root isozyme A3.8e-4288.76Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLIN NL+DST+KIIAEY+W+GGSG+D+RSKARTLPGPV+DPAKLPKWNYDGSSTNQAPG DSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

P12424 Glutamine synthetase2.2e-4291.01Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNL+DST+KIIAEY+WIGGSG+DLRSKARTL GPVTDPAKLPKWNYDGSST QAPG+DSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

P32289 Glutamine synthetase nodule isozyme3.8e-4288.76Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDLINLNL+D+T+KIIAEY+WIGGSGLDLRSKARTLPGPV+DP+KLPKWNYDGSST QAPG+DSEVI+YPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

Q56WN1 Glutamine synthetase cytosolic isozyme 1-12.9e-4287.64Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS +SDLINLNL+DSTDKIIAEY+W+GGSG+D+RSKARTLPGPVTDP++LPKWNYDGSST QAPG+DSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

Arabidopsis top hitse value%identityAlignment
AT1G66200.1 glutamine synthase clone F111.9e-4182.02Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS L+DL+NL+++D+++KIIAEY+W+GGSG+D+RSKARTLPGPVTDP+KLPKWNYDGSST QAPG DSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

AT1G66200.3 glutamine synthase clone F115.1e-4272.12Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNILARLLLSIDVFL
        MS L+DL+NL+++D+++KIIAEY+W+GGSG+D+RSKARTLPGPVTDP+KLPKWNYDGSST QAPG DSEVILYPQAIFKDPFRRGNNIL  +    D  +
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNILARLLLSIDVFL

Query:  NTIY
           Y
Subjt:  NTIY

AT3G17820.1 glutamine synthetase 1.33.0e-4286.52Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS LSDL+NLNLTD+T KIIAEY+WIGGSG+D+RSKARTLPGPVTDP+KLPKWNYDGSST QA G+DSEVILYPQAIFKDPFR+GNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

AT5G16570.1 glutamine synthetase 1;41.0e-4287.64Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS L+DLINL+L+DSTD+IIAEY+WIGGSGLD+RSKARTLPGPVTDP++LPKWNYDGSST QAPGDDSEVI+YPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL

AT5G37600.1 glutamine synthase clone R12.1e-4387.64Show/hide
Query:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL
        MS +SDLINLNL+DSTDKIIAEY+W+GGSG+D+RSKARTLPGPVTDP++LPKWNYDGSST QAPG+DSEVILYPQAIFKDPFRRGNNIL
Subjt:  MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTCCTCTCTGACCTCATCAATCTCAACCTCACTGATTCTACCGACAAGATCATTGCCGAATACGTATGGATTGGAGGATCGGGGCTCGATTTGAGAAGCAAAGC
TAGGACTCTTCCGGGACCGGTGACGGATCCAGCGAAGCTCCCGAAGTGGAACTACGACGGTTCCAGTACGAATCAAGCCCCCGGAGACGACAGCGAAGTCATCTTATATC
CCCAAGCTATTTTCAAGGATCCATTCAGAAGAGGAAACAACATCCTGGCGAGATTGCTCCTTTCCATTGACGTCTTTCTTAATACAATCTACGCATTTGGAACATTAGGA
TTGCCAGATGATTTAGAGCTGGTTCGCCTTGGCAAAGATTGCATTAGGAGAACGTGGGCTCATGGGGGAGGAGTCATGAGCTGCGAGATCACCAAATCTTGCAACAGAAG
ATGGCCTCGCCCATTGGTTGCCTCTTTCGAAGCTAACTGGATAGCTTCCTGGATGGGACGAGCTGTGGAATTTCGGTGGGCTCCAGGCTTGCAACGTCTCCCTGTATTTT
CAGGTGCCAGACAATTCAAGCCAGGATGCGATCGCGTTGTTGTTGCTTTGTTCAGGCTATACCGAGGGTACTGGCACGCGAACTACTTGTAG
mRNA sequenceShow/hide mRNA sequence
AAGGTCTGTTGGCAGTCCCCTATTAAACCCCTCACGTCCGGCCGCCTTCTCTCTCACCAAGCACCATTTCATTTCAACGCTTCTCTTCTCTCTCTCTCTCTCTCTCTCTC
TTTCGCTCCCGCTTTTTCCTCTGCTTCACTCGCCATGTCCTTCCTCTCTGACCTCATCAATCTCAACCTCACTGATTCTACCGACAAGATCATTGCCGAATACGTATGGA
TTGGAGGATCGGGGCTCGATTTGAGAAGCAAAGCTAGGACTCTTCCGGGACCGGTGACGGATCCAGCGAAGCTCCCGAAGTGGAACTACGACGGTTCCAGTACGAATCAA
GCCCCCGGAGACGACAGCGAAGTCATCTTATATCCCCAAGCTATTTTCAAGGATCCATTCAGAAGAGGAAACAACATCCTGGCGAGATTGCTCCTTTCCATTGACGTCTT
TCTTAATACAATCTACGCATTTGGAACATTAGGATTGCCAGATGATTTAGAGCTGGTTCGCCTTGGCAAAGATTGCATTAGGAGAACGTGGGCTCATGGGGGAGGAGTCA
TGAGCTGCGAGATCACCAAATCTTGCAACAGAAGATGGCCTCGCCCATTGGTTGCCTCTTTCGAAGCTAACTGGATAGCTTCCTGGATGGGACGAGCTGTGGAATTTCGG
TGGGCTCCAGGCTTGCAACGTCTCCCTGTATTTTCAGGTGCCAGACAATTCAAGCCAGGATGCGATCGCGTTGTTGTTGCTTTGTTCAGGCTATACCGAGGGTACTGGCA
CGCGAACTACTTGTAG
Protein sequenceShow/hide protein sequence
MSFLSDLINLNLTDSTDKIIAEYVWIGGSGLDLRSKARTLPGPVTDPAKLPKWNYDGSSTNQAPGDDSEVILYPQAIFKDPFRRGNNILARLLLSIDVFLNTIYAFGTLG
LPDDLELVRLGKDCIRRTWAHGGGVMSCEITKSCNRRWPRPLVASFEANWIASWMGRAVEFRWAPGLQRLPVFSGARQFKPGCDRVVVALFRLYRGYWHANYL