; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13420 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13420
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box/WD-40 repeat-containing protein
Genome locationCarg_Chr08:2713665..2714695
RNA-Seq ExpressionCarg13420
SyntenyCarg13420
Gene Ontology termsGO:0051568 - histone H3-K4 methylation (biological process)
GO:0048188 - Set1C/COMPASS complex (cellular component)
GO:0042393 - histone binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593280.1 F-box/WD-40 repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-71100Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
KAG7025630.1 F-box/WD-40 repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]1.1e-71100Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
XP_022960484.1 F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita moschata]1.1e-71100Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
XP_023004546.1 F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita maxima]6.1e-7097.18Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        MAPPTVADRSSA+RRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSF+VS SSEKPLLECLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALEEGRIRVSQW+GHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
XP_023513731.1 F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita pepo subsp. pepo]3.2e-7199.3Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALEEGRIRVSQW+GHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
TrEMBL top hitse value%identityAlignment
A0A0A0KBD6 F-box domain-containing protein5.2e-5983.1Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        M PP  ADRSSARRRS++DAKPV+SLSHDILCIIFSFLDLFDLVRC  VCKSWN AI+ SE+LRTFC+++QKQEM S+S+ EVS S EKPLLECLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALE+GRIRVSQW+GHSVR EQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
A0A1S3CEH9 F-box/WD-40 repeat-containing protein At3g520303.4e-5881.69Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        MAPP  ADRSS RRRS++DAKPV+SLSHDILCIIFSFLDLFDLVRC  VCKSWN AI+ SE+LRTFC+++QKQEM S+S+ +VS S EKPLL+CLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALE+GRIRV QW+GHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
A0A5D3CFV2 F-box/WD-40 repeat-containing protein9.9e-5880.99Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        M PP  ADRSS RRRS++DAKPV+SLSHDILCIIFSFLDLFDLVRC  VCKSWN AI+ SE+LRTFC+++QKQEM S+S+ +VS S EKPLL+CLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALE+GRIRV QW+GHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
A0A6J1HB56 F-box/WD-40 repeat-containing protein At3g52030 isoform X15.4e-72100Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
A0A6J1KSE3 F-box/WD-40 repeat-containing protein At3g52030 isoform X13.0e-7097.18Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        MAPPTVADRSSA+RRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSF+VS SSEKPLLECLEEIAM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        ERHKLALEEGRIRVSQW+GHSVRAEQCRMKMGLILTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
SwissProt top hitse value%identityAlignment
Q9SV01 F-box/WD-40 repeat-containing protein At3g520306.0e-2850Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        M      D SSAR+        + SL  DILCIIFSFLDLFDLV C+VVC SWN  I   +LL+  C K      +S SS   S S ++P    +E+ AM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        + HK+AL  GRI + +W  HS R  QCRMK GL+LTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
Arabidopsis top hitse value%identityAlignment
AT3G52030.1 F-box family protein with WD40/YVTN repeat doamin4.3e-2950Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        M      D SSAR+        + SL  DILCIIFSFLDLFDLV C+VVC SWN  I   +LL+  C K      +S SS   S S ++P    +E+ AM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        + HK+AL  GRI + +W  HS R  QCRMK GL+LTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
AT3G52030.2 F-box family protein with WD40/YVTN repeat doamin4.3e-2950Show/hide
Query:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM
        M      D SSAR+        + SL  DILCIIFSFLDLFDLV C+VVC SWN  I   +LL+  C K      +S SS   S S ++P    +E+ AM
Subjt:  MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAM

Query:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV
        + HK+AL  GRI + +W  HS R  QCRMK GL+LTGVGDKV
Subjt:  ERHKLALEEGRIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTCCAACGGTCGCCGACCGATCCTCGGCGAGAAGGCGGAGTAATATTGATGCAAAACCAGTTTACTCCCTAAGTCACGACATCTTGTGCATAATCTTTTCGTT
CCTCGACCTTTTCGACTTGGTTCGATGTTCAGTTGTTTGTAAATCCTGGAATAATGCTATTTTTAATTCCGAACTATTGCGAACATTTTGCATGAAGCATCAGAAGCAGG
AGATGGAGTCTTCTAGCTCTTTTGAAGTATCAGCTTCTTCGGAGAAACCATTGTTGGAATGTTTAGAGGAAATAGCGATGGAACGACACAAGTTGGCGTTGGAAGAAGGT
CGTATAAGAGTTTCTCAATGGATGGGCCATTCAGTGAGGGCTGAACAATGCCGAATGAAGATGGGTTTGATTCTTACAGGAGTGGGTGATAAAGTATAG
mRNA sequenceShow/hide mRNA sequence
TCACCAATCCTTTCCCCGTCCGTGAATCAGCTTCCGAACAACACCGGCGATGGCTCCTCCAACGGTCGCCGACCGATCCTCGGCGAGAAGGCGGAGTAATATTGATGCAA
AACCAGTTTACTCCCTAAGTCACGACATCTTGTGCATAATCTTTTCGTTCCTCGACCTTTTCGACTTGGTTCGATGTTCAGTTGTTTGTAAATCCTGGAATAATGCTATT
TTTAATTCCGAACTATTGCGAACATTTTGCATGAAGCATCAGAAGCAGGAGATGGAGTCTTCTAGCTCTTTTGAAGTATCAGCTTCTTCGGAGAAACCATTGTTGGAATG
TTTAGAGGAAATAGCGATGGAACGACACAAGTTGGCGTTGGAAGAAGGTCGTATAAGAGTTTCTCAATGGATGGGCCATTCAGTGAGGGCTGAACAATGCCGAATGAAGA
TGGGTTTGATTCTTACAGGAGTGGGTGATAAAGTATAG
Protein sequenceShow/hide protein sequence
MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNSELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAMERHKLALEEG
RIRVSQWMGHSVRAEQCRMKMGLILTGVGDKV