; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13440 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13440
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transcription factor Y subunit
Genome locationCarg_Chr08:2837087..2839152
RNA-Seq ExpressionCarg13440
SyntenyCarg13440
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593299.1 Nuclear transcription factor Y subunit A-9, partial [Cucurbita argyrosperma subsp. sororia]6.3e-179100Show/hide
Query:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPN
        NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPN
Subjt:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPN

Query:  SQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM
        SQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM
Subjt:  SQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD
        RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD
Subjt:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD

Query:  ESMQVNAAPQRAIPIK
        ESMQVNAAPQRAIPIK
Subjt:  ESMQVNAAPQRAIPIK

KAG7025650.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-184100Show/hide
Query:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP
        MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP
Subjt:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP

Query:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
        VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
Subjt:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH

Query:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS
        ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS
Subjt:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS

Query:  TYNSKLADESMQVNAAPQRAIPIK
        TYNSKLADESMQVNAAPQRAIPIK
Subjt:  TYNSKLADESMQVNAAPQRAIPIK

XP_022960498.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata]1.0e-18199.07Show/hide
Query:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP
        MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP 
Subjt:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP

Query:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
        VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLH
Subjt:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH

Query:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS
        ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLS
Subjt:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS

Query:  TYNSKLADESMQVNAAPQRAIPIK
        TYNSKLADESMQVNAAPQRAIPIK
Subjt:  TYNSKLADESMQVNAAPQRAIPIK

XP_022960500.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata]3.9e-17399.04Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESMQV
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLSTYNSKLADESMQV
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESMQV

Query:  NAAPQRAIPIK
        NAAPQRAIPIK
Subjt:  NAAPQRAIPIK

XP_023515220.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita pepo subsp. pepo]2.0e-18098.15Show/hide
Query:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP
        MFF LGWQNKFQTMPSKPGIVEQE ADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTG+EVQHLKYIPFSTSPP
Subjt:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP

Query:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
        VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
Subjt:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH

Query:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS
        ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINS INHVSEPVSEG SNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS
Subjt:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS

Query:  TYNSKLADESMQVNAAPQRAIPIK
        TYNSKLADES+QVNAAPQRAIPIK
Subjt:  TYNSKLADESMQVNAAPQRAIPIK

TrEMBL top hitse value%identityAlignment
A0A1S3CED9 Nuclear transcription factor Y subunit1.3e-13780.69Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPS+P  V+Q+VAD AKYLLQS+KYSEPWWHGVGNNTI  EDA KTSSAEYLNVTV S A   QANDEN GKEVQHLKYIPFSTSPPVGE LD NSQMEL
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQ CQMLTSYGPQ TLP  YGLHHARMPLPLEME EPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD-----
        SGGRFLNTKKPN+V+SN   EEDINSG NH ++PVSE GS YMV +E G+K+TLD+Q    +E M QNMQITHAFFN GKSN HGLSTYNS+L D     
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD-----

Query:  -----ESMQVNAAPQRAIPIK
             ESMQVN APQRAIPIK
Subjt:  -----ESMQVNAAPQRAIPIK

A0A6J1H7S4 Nuclear transcription factor Y subunit1.9e-17399.04Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESMQV
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLSTYNSKLADESMQV
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESMQV

Query:  NAAPQRAIPIK
        NAAPQRAIPIK
Subjt:  NAAPQRAIPIK

A0A6J1HB71 Nuclear transcription factor Y subunit5.0e-18299.07Show/hide
Query:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP
        MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP 
Subjt:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP

Query:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
        VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLH
Subjt:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH

Query:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS
        ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLS
Subjt:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLS

Query:  TYNSKLADESMQVNAAPQRAIPIK
        TYNSKLADESMQVNAAPQRAIPIK
Subjt:  TYNSKLADESMQVNAAPQRAIPIK

A0A6J1KWS3 Nuclear transcription factor Y subunit4.3e-15798.23Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +GHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG

A0A6J1L019 Nuclear transcription factor Y subunit1.1e-16598.31Show/hide
Query:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP
        MFFLLGWQNKFQTMPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP
Subjt:  MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPP

Query:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
        VGERLDPNSQMEL+GHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH
Subjt:  VGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLH

Query:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG
        ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  ESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-73.2e-2457.55Show/hide
Query:  GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEP
        G+    +PLP +   EPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG GGRFLN KK +    + + EE  N      +  
Subjt:  GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEP

Query:  VSEGGS
         S G S
Subjt:  VSEGGS

Q8LFU0 Nuclear transcription factor Y subunit A-108.3e-2535.02Show/hide
Query:  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQ
        PWW+  G+  +T E  +  +S  +  V   +        D+ T   +         T  P GE+   +     V  ++    + F  AQ       Y   
Subjt:  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQMLTSYGPQ

Query:  TTLPHFYGLHHA--------RMPLPLEMEAE---PVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVIS
          +  +YG+  A        R+ +PL+ME E    +YVN+KQYHGI+RRRQSRAKAE   K+ + RKPY+H SRHLHAMRR RGSGGRFLNTK  ++   
Subjt:  TTLPHFYGLHHA--------RMPLPLEMEAE---PVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVIS

Query:  NKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDT
        +K      NS  + V  P +E  ++   ANE+ + D+
Subjt:  NKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDT

Q8VY64 Nuclear transcription factor Y subunit A-42.9e-2544.24Show/hide
Query:  TSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNS-QMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFY--------GLHHARMPLPLEM
        +S   LS  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D       + +  Q  LPH Y        G+    +PL  + 
Subjt:  TSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNS-QMELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFY--------GLHHARMPLPLEM

Query:  EAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPN
          EPV+VNAKQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N
Subjt:  EAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPN

Q945M9 Nuclear transcription factor Y subunit A-92.3e-3041.56Show/hide
Query:  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP-PVGERLDPNSQM------------ELVGHSI-VLTSYPF
        PW                  S++ + + + S    S +N +NT  KE Q       +TSP   G+  D N +             +LVGH++   +S P+
Subjt:  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP-PVGERLDPNSQM------------ELVGHSI-VLTSYPF

Query:  SDAQCCQMLTSYG--PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK
         D     ++ +YG  P   +P + G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK
Subjt:  SDAQCCQMLTSYG--PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK

Query:  PNSVISNKTMEEDINSGINHVSEPVSEGGSN
         N+  S +  EE  N    HV++  S   S+
Subjt:  PNSVISNKTMEEDINSGINHVSEPVSEGGSN

Q9LXV5 Nuclear transcription factor Y subunit A-12.5e-2940.97Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTG--KEVQHL-------KYIPFS
        M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N +    V SA+     N EN G  K+ Q          +    
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTG--KEVQHL-------KYIPFS

Query:  TSPPVGERLDPNSQM----ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
          P +  R   +  +    ELVGH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  TSPPVGERLDPNSQM----ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRF
        I+ RKPYLHESRH HAMRRAR SGGRF
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRF

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.6e-3141.56Show/hide
Query:  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP-PVGERLDPNSQM------------ELVGHSI-VLTSYPF
        PW                  S++ + + + S    S +N +NT  KE Q       +TSP   G+  D N +             +LVGH++   +S P+
Subjt:  PWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP-PVGERLDPNSQM------------ELVGHSI-VLTSYPF

Query:  SDAQCCQMLTSYG--PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK
         D     ++ +YG  P   +P + G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK
Subjt:  SDAQCCQMLTSYG--PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK

Query:  PNSVISNKTMEEDINSGINHVSEPVSEGGSN
         N+  S +  EE  N    HV++  S   S+
Subjt:  PNSVISNKTMEEDINSGINHVSEPVSEGGSN

AT5G12840.1 nuclear factor Y, subunit A11.8e-3040.97Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTG--KEVQHL-------KYIPFS
        M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N +    V SA+     N EN G  K+ Q          +    
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTG--KEVQHL-------KYIPFS

Query:  TSPPVGERLDPNSQM----ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
          P +  R   +  +    ELVGH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  TSPPVGERLDPNSQM----ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRF
        I+ RKPYLHESRH HAMRRAR SGGRF
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRF

AT5G12840.2 nuclear factor Y, subunit A16.1e-3140.71Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERL
        M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N +    V SA+     N EN G            +     E  
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERL

Query:  DPNSQM------------ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI
        DP   +            ELVGH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KVI
Subjt:  DPNSQM------------ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  KSRKPYLHESRHLHAMRRARGSGGRF
        + RKPYLHESRH HAMRRAR SGGRF
Subjt:  KSRKPYLHESRHLHAMRRARGSGGRF

AT5G12840.3 nuclear factor Y, subunit A11.8e-3040.97Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTG--KEVQHL-------KYIPFS
        M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N +    V SA+     N EN G  K+ Q          +    
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTG--KEVQHL-------KYIPFS

Query:  TSPPVGERLDPNSQM----ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
          P +  R   +  +    ELVGH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  TSPPVGERLDPNSQM----ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRF
        I+ RKPYLHESRH HAMRRAR SGGRF
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRF

AT5G12840.4 nuclear factor Y, subunit A16.1e-3140.71Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERL
        M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N +    V SA+     N EN G            +     E  
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERL

Query:  DPNSQM------------ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI
        DP   +            ELVGH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KVI
Subjt:  DPNSQM------------ELVGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  KSRKPYLHESRHLHAMRRARGSGGRF
        + RKPYLHESRH HAMRRAR SGGRF
Subjt:  KSRKPYLHESRHLHAMRRARGSGGRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCCTTTTGGGGTGGCAGAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAA
ATACTCTGAGCCTTGGTGGCATGGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTA
TGCTTTCACAAGCAAATGATGAAAATACTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCATTTTCGACATCCCCACCCGTGGGCGAACGCCTAGATCCAAATTCCCAG
ATGGAACTTGTTGGCCACTCGATTGTTTTGACATCATATCCTTTTTCAGATGCACAATGTTGTCAAATGCTGACTTCATATGGACCACAAACAACGTTACCTCATTTTTA
TGGACTTCACCATGCTAGGATGCCATTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCA
AAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTTTCCTGAAT
ACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTGGATCAAATTACATGGT
GGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGGTGGAAAGT
CGAATGGCCATGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTATAGAACTAGGCAAGTGTGAAATCAAAAATCGGTTGGGGAAGAGAACGAAACATTCTTTTTAAGGGCGTGTAAACCTCTCCGTAGTAGATGCATTTTTAAAACGTTGA
AGGAAGCCCAAAAGAAAAATCAAAAGAAGACAATATTTGCTAGTGATAGGCTTGGGCCATTACAGTAAGATCGTGTCCCCCTGTTGTTTATGCGCTTGAATCTTCAGATG
AACAATAATTTAAACCCTCGACTACTTTGGAGAAGGCTCGGACTTTTTTTAGAGCAGCCCCAAACCATGGAATCCGGTGTGGTATAAGTAGAAGTGATTTATATTGTTTT
TGTTTCTAATGTTCTTCCTTTTGGGGTGGCAGAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAA
TCAACCAAATACTCTGAGCCTTGGTGGCATGGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAG
TGCAGCTATGCTTTCACAAGCAAATGATGAAAATACTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCATTTTCGACATCCCCACCCGTGGGCGAACGCCTAGATCCAA
ATTCCCAGATGGAACTTGTTGGCCACTCGATTGTTTTGACATCATATCCTTTTTCAGATGCACAATGTTGTCAAATGCTGACTTCATATGGACCACAAACAACGTTACCT
CATTTTTATGGACTTCACCATGCTAGGATGCCATTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTC
GCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTT
TCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTGGATCAAAT
TACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGG
TGGAAAGTCGAATGGCCATGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTGA
Protein sequenceShow/hide protein sequence
MFFLLGWQNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQ
MELVGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLN
TKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLADESMQVNAAPQRAIPIK