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Carg13448 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13448
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:2897879..2898388
RNA-Seq ExpressionCarg13448
SyntenyCarg13448
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025658.1 hypothetical protein SDJN02_12155, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-83100Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
        MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN

Query:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRKRGMDNFIYITMIAPG
        EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRKRGMDNFIYITMIAPG
Subjt:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRKRGMDNFIYITMIAPG

XP_004135925.1 uncharacterized protein LOC101205320 [Cucumis sativus]4.4e-5576.69Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW
        MAL+  LNHS  FP  NGSKI AC++S  PPI + SF+S++ AKRCLRC TVYSD+DNSPSAC FHGH+TGE GLF+LSPPHQGIDGEWSDGSGVIVYKW
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW

Query:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        N+K NRPN+G GNWKRRWSCCSEYDE APPCR+
Subjt:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

XP_008461278.1 PREDICTED: uncharacterized protein LOC103499914 [Cucumis melo]4.0e-5678.2Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW
        MAL+  L+HSL FP  NGSKI AC++S  PPI + SF+S+A AKRCLRC TVYSD+DNSPSACAFHGH+TGE GLF+LSPPHQGIDGEWSDGSGVIVYKW
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW

Query:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        N+K NRPN+G GNWKRRWSCCSEYDE APPCR+
Subjt:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

XP_022959906.1 uncharacterized protein LOC111460822 [Cucurbita moschata]4.7e-7399.24Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
        MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN

Query:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCR+
Subjt:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

XP_023004680.1 uncharacterized protein LOC111497902 [Cucurbita maxima]6.3e-7095.45Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
        M LSTCLN  L FPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGH+TGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN

Query:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCR+
Subjt:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

TrEMBL top hitse value%identityAlignment
A0A0A0K8C8 Uncharacterized protein2.1e-5576.69Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW
        MAL+  LNHS  FP  NGSKI AC++S  PPI + SF+S++ AKRCLRC TVYSD+DNSPSAC FHGH+TGE GLF+LSPPHQGIDGEWSDGSGVIVYKW
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW

Query:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        N+K NRPN+G GNWKRRWSCCSEYDE APPCR+
Subjt:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

A0A1S3CEC7 uncharacterized protein LOC1034999141.9e-5678.2Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW
        MAL+  L+HSL FP  NGSKI AC++S  PPI + SF+S+A AKRCLRC TVYSD+DNSPSACAFHGH+TGE GLF+LSPPHQGIDGEWSDGSGVIVYKW
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW

Query:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        N+K NRPN+G GNWKRRWSCCSEYDE APPCR+
Subjt:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

A0A5A7UVD3 Uncharacterized protein1.9e-5678.2Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW
        MAL+  L+HSL FP  NGSKI AC++S  PPI + SF+S+A AKRCLRC TVYSD+DNSPSACAFHGH+TGE GLF+LSPPHQGIDGEWSDGSGVIVYKW
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAA-AKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKW

Query:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        N+K NRPN+G GNWKRRWSCCSEYDE APPCR+
Subjt:  NEKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

A0A6J1H664 uncharacterized protein LOC1114608222.3e-7399.24Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
        MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN

Query:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCR+
Subjt:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

A0A6J1KV96 uncharacterized protein LOC1114979023.1e-7095.45Show/hide
Query:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
        M LSTCLN  L FPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGH+TGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN
Subjt:  MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWN

Query:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK
        EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCR+
Subjt:  EKGNRPNTGAGNWKRRWSCCSEYDEDAPPCRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTATCGACGTGTTTAAATCACAGCCTTGGATTTCCCTCATCGAACGGTTCAAAGATCACGGCATGTACGAGTTCGAATACTCCTCCGATCGGTAATGTCAGTTT
CCGATCCGCCGCCGCGAAACGCTGCTTAAGATGCCGCACCGTTTACTCCGACCTCGATAATTCTCCTTCGGCATGCGCCTTCCATGGCCACGTCACTGGGGAGAGTGGGT
TGTTTTCGTTGTCGCCGCCGCATCAGGGGATTGACGGCGAGTGGAGCGACGGCTCTGGTGTGATCGTTTACAAGTGGAATGAGAAGGGCAATCGTCCGAACACCGGCGCC
GGCAACTGGAAGAGACGGTGGAGCTGTTGCTCTGAGTATGATGAAGATGCCCCTCCTTGTCGCAAACGAGGGATGGACAATTTCATTTACATAACTATGATTGCGCCTGG
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTATCGACGTGTTTAAATCACAGCCTTGGATTTCCCTCATCGAACGGTTCAAAGATCACGGCATGTACGAGTTCGAATACTCCTCCGATCGGTAATGTCAGTTT
CCGATCCGCCGCCGCGAAACGCTGCTTAAGATGCCGCACCGTTTACTCCGACCTCGATAATTCTCCTTCGGCATGCGCCTTCCATGGCCACGTCACTGGGGAGAGTGGGT
TGTTTTCGTTGTCGCCGCCGCATCAGGGGATTGACGGCGAGTGGAGCGACGGCTCTGGTGTGATCGTTTACAAGTGGAATGAGAAGGGCAATCGTCCGAACACCGGCGCC
GGCAACTGGAAGAGACGGTGGAGCTGTTGCTCTGAGTATGATGAAGATGCCCCTCCTTGTCGCAAACGAGGGATGGACAATTTCATTTACATAACTATGATTGCGCCTGG
TTGA
Protein sequenceShow/hide protein sequence
MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPSACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWNEKGNRPNTGA
GNWKRRWSCCSEYDEDAPPCRKRGMDNFIYITMIAPG