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Carg13451 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13451
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionarabinogalactan peptide 23-like
Genome locationCarg_Chr08:2908950..2909141
RNA-Seq ExpressionCarg13451
SyntenyCarg13451
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025661.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-19100Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
XP_022933008.1 arabinogalactan peptide 23-like [Cucurbita moschata]5.4e-1895.24Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASA LPALGSLVGASLVS VA+YFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
XP_022960230.1 arabinogalactan peptide 23-like [Cucurbita moschata]3.7e-1998.41Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIACAALFAAAT+TAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
XP_023004714.1 arabinogalactan peptide 23-like [Cucurbita maxima]3.7e-1998.41Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVA+YFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
XP_023528634.1 arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo]3.0e-1690.48Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMK IACAALFAAA VTAVVASDESLSPAAAPGPSSAASAALPALGSL+GASLVSFVA+  N
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
TrEMBL top hitse value%identityAlignment
A0A1S3CDX5 arabinogalactan peptide 23-like1.4e-1180.65Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYF
        MEMKKIACAALFAAA V+A VA+DES+SPAAAPGPSSAASAALP L    GAS+VSFVA YF
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYF
A0A6J1F3F5 arabinogalactan peptide 23-like2.6e-1895.24Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASA LPALGSLVGASLVS VA+YFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
A0A6J1H8I1 arabinogalactan peptide 23-like1.8e-1998.41Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIACAALFAAAT+TAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
A0A6J1IYE9 arabinogalactan peptide 23-like7.8e-1585.71Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMK IAC ALF AA VTAVVASDES SPAAAPGPSSAASAALPALGSL+GASLVSFVA+  N
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
A0A6J1KX42 arabinogalactan peptide 23-like1.8e-1998.41Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVA+YFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 237.8e-1269.84Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIAC  LFAAA++TAV+A++E  +P  APGP+SAASAALPALGSLVGASLVS  ++Y +
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)5.7e-1064.06Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGP-SSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIAC  +FAAA++TAV+A++     A APGP +S AS A+PALGSLVGASLVS  A+Y N
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGP-SSAASAALPALGSLVGASLVSFVAFYFN
AT3G57690.1 arabinogalactan protein 235.6e-1369.84Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN
        MEMKKIAC  LFAAA++TAV+A++E  +P  APGP+SAASAALPALGSLVGASLVS  ++Y +
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGAAGAAGATCGCCTGCGCCGCCCTCTTCGCCGCCGCTACTGTCACAGCAGTCGTGGCCTCCGATGAGTCTCTCTCTCCCGCCGCCGCTCCAGGACCGAGCAG
CGCCGCCTCCGCCGCTCTTCCCGCCCTTGGATCGCTCGTCGGCGCCTCGCTTGTTTCCTTCGTCGCCTTCTACTTCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGAAGAAGATCGCCTGCGCCGCCCTCTTCGCCGCCGCTACTGTCACAGCAGTCGTGGCCTCCGATGAGTCTCTCTCTCCCGCCGCCGCTCCAGGACCGAGCAG
CGCCGCCTCCGCCGCTCTTCCCGCCCTTGGATCGCTCGTCGGCGCCTCGCTTGTTTCCTTCGTCGCCTTCTACTTCAACTGA
Protein sequenceShow/hide protein sequence
MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAFYFN