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Carg13472 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13472
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEcotropic viral integration site protein
Genome locationCarg_Chr08:2999592..3001016
RNA-Seq ExpressionCarg13472
SyntenyCarg13472
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014211.1 hypothetical protein SDJN02_24386 [Cucurbita argyrosperma subsp. argyrosperma]7.0e-5288.64Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
        M ++ KADEQLF LLASLLHQVESLTNQEEVELR KIEALGLEVTKVPSKSLKQLDEV L+E+AKELDKLSEKLDDVDEMISSAMAADPQVQSLLS TAD
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD

Query:  IWMPVITASTDDRRKFTASAGENSETEKNCAS
        IWMPVITAS D+RRKFTAS GENSETE+NC S
Subjt:  IWMPVITASTDDRRKFTASAGENSETEKNCAS

KAG7025681.1 hypothetical protein SDJN02_12179, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-61100Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
        MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD

Query:  IWMPVITASTDDRRKFTASAGENSETEKNCAS
        IWMPVITASTDDRRKFTASAGENSETEKNCAS
Subjt:  IWMPVITASTDDRRKFTASAGENSETEKNCAS

XP_022960425.1 uncharacterized protein LOC111461159 [Cucurbita moschata]8.0e-5696.24Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEAL-GLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTA
        MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEAL GLEVTKVPSKSLKQLDE   MELAKELDKLSEKLDDV+EMISSAMAADPQVQSLLSHTA
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEAL-GLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTA

Query:  DIWMPVITASTDDRRKFTASAGENSETEKNCAS
        DIWMPVITASTDDRRKFTASAGENSETEKNCAS
Subjt:  DIWMPVITASTDDRRKFTASAGENSETEKNCAS

XP_023004866.1 uncharacterized protein LOC111498046 [Cucurbita maxima]8.5e-5897.73Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
        MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDE   MELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD

Query:  IWMPVITASTDDRRKFTASAGENSETEKNCAS
        IWMPVITASTDDRRKFTASAGENSETEKNCAS
Subjt:  IWMPVITASTDDRRKFTASAGENSETEKNCAS

XP_023514533.1 uncharacterized protein LOC111778791 [Cucurbita pepo subsp. pepo]1.0e-5595.45Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
        MA  WKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDE   MELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD

Query:  IWMPVITASTDDRRKFTASAGENSETEKNCAS
        IWMPVITASTDDRRKFTASAGENSETEK+CAS
Subjt:  IWMPVITASTDDRRKFTASAGENSETEKNCAS

TrEMBL top hitse value%identityAlignment
A0A0A0KBJ8 Uncharacterized protein2.3e-4885.61Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
        MA + KADEQLFQLLA+LLHQVESLTNQEEVELR KIEALGLEVTKVPSKSLKQLDE   +E+AKELDKLSEKLD+VDEMISSAMAADPQVQSLLS TAD
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD

Query:  IWMPVITASTDDRRKFTASAGENSETEKNCAS
        IWMPVITAS D+RR FT S GENSETE NC S
Subjt:  IWMPVITASTDDRRKFTASAGENSETEKNCAS

A0A6J1GPL7 uncharacterized protein LOC1114559839.2e-5087.12Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
        M ++ KADEQLF LLASLLHQVESLTNQEEVELR KIEALGLEVTKVPSKSLKQLDE   +E+AKELDKLSEKLDDVDEMISSAMAADPQVQSLLS TAD
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD

Query:  IWMPVITASTDDRRKFTASAGENSETEKNCAS
        IWMPVITAS D+RRKFTAS GENSETE+NC S
Subjt:  IWMPVITASTDDRRKFTASAGENSETEKNCAS

A0A6J1H914 uncharacterized protein LOC1114611593.9e-5696.24Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEAL-GLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTA
        MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEAL GLEVTKVPSKSLKQLDE   MELAKELDKLSEKLDDV+EMISSAMAADPQVQSLLSHTA
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEAL-GLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTA

Query:  DIWMPVITASTDDRRKFTASAGENSETEKNCAS
        DIWMPVITASTDDRRKFTASAGENSETEKNCAS
Subjt:  DIWMPVITASTDDRRKFTASAGENSETEKNCAS

A0A6J1JXP7 uncharacterized protein LOC1114884344.6e-4986.92Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
        M ++ KADEQLF LLASLLHQVESLTNQEEVELR KIEALGLEVTKVPSKSLKQLDE   +E++KELDKLSEKLDDVDEMISSAMAADPQVQSLLS TAD
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD

Query:  IWMPVITASTDDRRKFTASAGENSETEKNC
        IWMPVITAS D+RRKFTAS GENSETE+NC
Subjt:  IWMPVITASTDDRRKFTASAGENSETEKNC

A0A6J1KTB9 uncharacterized protein LOC1114980464.1e-5897.73Show/hide
Query:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
        MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDE   MELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD
Subjt:  MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTAD

Query:  IWMPVITASTDDRRKFTASAGENSETEKNCAS
        IWMPVITASTDDRRKFTASAGENSETEKNCAS
Subjt:  IWMPVITASTDDRRKFTASAGENSETEKNCAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44360.1 unknown protein1.2e-3873.33Show/hide
Query:  KADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTADIWMPV
        K DEQLFQLL+ LL QVESLTN EEVELR KIEALGLEVTKVPSKS + L+EV   E+AKELDKLS KLDDVDEMISSA+A+DPQVQ+LLS TAD+WMPV
Subjt:  KADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTADIWMPV

Query:  ITASTDDRRKFTASAGENSE
        ITA  ++R  FTAS  ++ +
Subjt:  ITASTDDRRKFTASAGENSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGAAATGGAAGGCGGACGAGCAACTATTCCAGCTTCTTGCCAGTCTTCTTCACCAGGTGGAATCACTGACCAACCAGGAGGAAGTTGAACTTCGTATGAAGAT
CGAAGCCCTTGGACTTGAAGTAACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTCGATGAAGTCCGTCTGATGGAACTTGCCAAGGAGTTGGATAAGTTATCTGAAAAGC
TAGACGATGTGGATGAAATGATTTCTTCAGCAATGGCTGCTGACCCACAGGTGCAGTCTCTTTTGAGTCATACTGCTGATATTTGGATGCCGGTGATAACTGCATCCACT
GATGACCGGCGGAAGTTTACAGCTTCAGCTGGAGAAAATTCAGAAACAGAAAAGAATTGTGCAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGAAATGGAAGGCGGACGAGCAACTATTCCAGCTTCTTGCCAGTCTTCTTCACCAGGTGGAATCACTGACCAACCAGGAGGAAGTTGAACTTCGTATGAAGAT
CGAAGCCCTTGGACTTGAAGTAACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTCGATGAAGTCCGTCTGATGGAACTTGCCAAGGAGTTGGATAAGTTATCTGAAAAGC
TAGACGATGTGGATGAAATGATTTCTTCAGCAATGGCTGCTGACCCACAGGTGCAGTCTCTTTTGAGTCATACTGCTGATATTTGGATGCCGGTGATAACTGCATCCACT
GATGACCGGCGGAAGTTTACAGCTTCAGCTGGAGAAAATTCAGAAACAGAAAAGAATTGTGCAAGTTAG
Protein sequenceShow/hide protein sequence
MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTADIWMPVITAST
DDRRKFTASAGENSETEKNCAS