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Carg13477 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13477
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGrowth arrest and DNA damage-inducible proteins-interacting protein like
Genome locationCarg_Chr08:3014767..3015285
RNA-Seq ExpressionCarg13477
SyntenyCarg13477
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593338.1 hypothetical protein SDJN03_12814, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3894.44Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGAT
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFL PEKDSL   G T
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGAT
KAG7025686.1 hypothetical protein SDJN02_12184, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-88100Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGATWRTPVRASKA
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGATWRTPVRASKA
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGATWRTPVRASKA

Query:  SYDQTQASSHRLRPLPPPSSSRILLRLLQRCPETFLLSQKQEKRRRFTPRRLRRLHLGASRDSYGGRVSLLL
        SYDQTQASSHRLRPLPPPSSSRILLRLLQRCPETFLLSQKQEKRRRFTPRRLRRLHLGASRDSYGGRVSLLL
Subjt:  SYDQTQASSHRLRPLPPPSSSRILLRLLQRCPETFLLSQKQEKRRRFTPRRLRRLHLGASRDSYGGRVSLLL
XP_022959695.1 uncharacterized protein LOC111460692 [Cucurbita moschata]4.4e-3893.33Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGAT
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFL PEKDSL + G T
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGAT
XP_023514532.1 uncharacterized protein LOC111778789 [Cucurbita pepo subsp. pepo]7.5e-3892.22Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGAT
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLI+SPLLLLL VHWLSNAGNFL PEKDSL   G T
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGAT
XP_038898802.1 uncharacterized protein LOC120086305 [Benincasa hispida]1.4e-3180.21Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
        MA+N GSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLL+VHWLSN  N         PE+DSL   G T
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
TrEMBL top hitse value%identityAlignment
A0A0A0K9W6 Uncharacterized protein2.2e-2779.31Show/hide
Query:  ANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
        AN+HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVE VFDQLKLLLIVSPLLLLLLVHWLSN  +         PEKDSL   G T
Subjt:  ANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
A0A1S3CE82 uncharacterized protein LOC1034998792.4e-2677.27Show/hide
Query:  AANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
        A   HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVE VFDQLKLLLIVSPLLLLLLVHWLSN  N         PEK+SL   G T
Subjt:  AANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
A0A6J1GPN5 uncharacterized protein LOC1114563233.4e-2873.96Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
        MA NG SS +NS SQPTFPLHLCFFFLIL MFL+FSW+S YESAVEGVFDQLKLLLIVSPLLLLLL+HWLSN  N         PEKDSL   G T
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
A0A6J1H718 uncharacterized protein LOC1114606922.1e-3893.33Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGAT
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFL PEKDSL + G T
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGAT
A0A6J1JW83 uncharacterized protein LOC1114884356.9e-2975Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
        MA NG SS  NS SQPTFPLHLCFFFLIL MFL+FSWYS YESAVEGVFDQLKLLLI+SPLLLLLLVHWLSN  N         PEKDSL   G T
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLFPEKDSLQNPGAT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein1.2e-0434.78Show/hide
Query:  SSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN
        SS  +S S    P  +     +  +FL  SWY + E A E   +Q+   L++ PL L++LV WLS+  N
Subjt:  SSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN
AT2G31940.1 unknown protein2.3e-1346.59Show/hide
Query:  NSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSN---AGNFL-----FPEKDSLQNPGAT
        +    P  PLHLC F LILLMF++ SWY++YE  +EG   Q KL L+ SPLLLLL VH+LS+    G  +       E++SL   G T
Subjt:  NSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSN---AGNFL-----FPEKDSLQNPGAT
AT5G19875.1 unknown protein8.9e-1347.22Show/hide
Query:  HLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFL--FPEKDSLQNPGAT
        HLCF F+++   LSF+WY N+ES +E   D LKL+ I +PL LLLLVH+ S   +F   +PE+DS+   G++
Subjt:  HLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFL--FPEKDSLQNPGAT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTCCCTCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTG
GTACTCCAATTACGAGTCCGCCGTCGAAGGCGTCTTTGATCAACTCAAGCTTCTTCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAACGCCG
GAAACTTTCTTTTTCCAGAAAAAGACTCGCTCCAAAATCCGGGCGCCACGTGGCGTACACCAGTCCGCGCGTCGAAAGCGTCTTATGATCAAACTCAAGCTTCTTCTCAT
CGTCTCCGTCCGCTTCCTCCTCCGTCCTCCTCTCGCATCCTACTGAGGCTTCTCCAACGATGCCCGGAAACTTTCCTTTTATCGCAGAAACAAGAAAAAAGACGTCGCTT
CACACCGCGCCGGTTGAGACGACTACATCTCGGGGCGTCTCGGGATTCTTATGGTGGTCGTGTCTCACTTTTGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTCCCTCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTG
GTACTCCAATTACGAGTCCGCCGTCGAAGGCGTCTTTGATCAACTCAAGCTTCTTCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAACGCCG
GAAACTTTCTTTTTCCAGAAAAAGACTCGCTCCAAAATCCGGGCGCCACGTGGCGTACACCAGTCCGCGCGTCGAAAGCGTCTTATGATCAAACTCAAGCTTCTTCTCAT
CGTCTCCGTCCGCTTCCTCCTCCGTCCTCCTCTCGCATCCTACTGAGGCTTCTCCAACGATGCCCGGAAACTTTCCTTTTATCGCAGAAACAAGAAAAAAGACGTCGCTT
CACACCGCGCCGGTTGAGACGACTACATCTCGGGGCGTCTCGGGATTCTTATGGTGGTCGTGTCTCACTTTTGCTATGA
Protein sequenceShow/hide protein sequence
MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLFPEKDSLQNPGATWRTPVRASKASYDQTQASSH
RLRPLPPPSSSRILLRLLQRCPETFLLSQKQEKRRRFTPRRLRRLHLGASRDSYGGRVSLLL