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Carg13482 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13482
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNon-specific lipid-transfer protein
Genome locationCarg_Chr08:3036163..3036717
RNA-Seq ExpressionCarg13482
SyntenyCarg13482
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025691.1 Non-specific lipid-transfer protein 8 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-53100Show/hide
Query:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP
        MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP
Subjt:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP

Query:  FSISAGIDCSKIS
        FSISAGIDCSKIS
Subjt:  FSISAGIDCSKIS

XP_004135897.1 non-specific lipid-transfer protein 8 [Cucumis sativus]2.0e-3981.13Show/hide
Query:  IVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGI
        ++  + LLLQ S+A ISC+DVTKDLMPCVSYLMSGSGKPPSACCDGAKALS AATSS DKKAACECIKS A +V YNVKLA+DLP NCGI+LPFSISAGI
Subjt:  IVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGI

Query:  DCSKIS
        DCSKI+
Subjt:  DCSKIS

XP_022959696.1 non-specific lipid-transfer protein 8-like [Cucurbita moschata]3.2e-5399.12Show/hide
Query:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP
        MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYN KLAEDLPGNCGITLP
Subjt:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP

Query:  FSISAGIDCSKIS
        FSISAGIDCSKIS
Subjt:  FSISAGIDCSKIS

XP_023004354.1 non-specific lipid-transfer protein 8-like [Cucurbita maxima]3.3e-5094.69Show/hide
Query:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP
        MASLKVT+  MMLLLLQESEAAISCNDVTK+LMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAG+VKYN KLAEDLPGNCGITLP
Subjt:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP

Query:  FSISAGIDCSKIS
        FSISAGIDCSKIS
Subjt:  FSISAGIDCSKIS

XP_023514955.1 non-specific lipid-transfer protein 8-like [Cucurbita pepo subsp. pepo]4.3e-5094.69Show/hide
Query:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP
        MASLKVTI  MMLLLLQESEAAISCNDVTKDL PCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAAC+CIKSVAG+VKYN KLAEDLPGNCGITLP
Subjt:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP

Query:  FSISAGIDCSKIS
        FSISAGIDCSKIS
Subjt:  FSISAGIDCSKIS

TrEMBL top hitse value%identityAlignment
A0A0A0K657 Non-specific lipid-transfer protein9.7e-4081.13Show/hide
Query:  IVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGI
        ++  + LLLQ S+A ISC+DVTKDLMPCVSYLMSGSGKPPSACCDGAKALS AATSS DKKAACECIKS A +V YNVKLA+DLP NCGI+LPFSISAGI
Subjt:  IVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGI

Query:  DCSKIS
        DCSKI+
Subjt:  DCSKIS

A0A1S3CEM4 Non-specific lipid-transfer protein9.1e-3878.3Show/hide
Query:  IVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGI
        I+  + LLL  S+A ISC+DVTKDLMPCVSYL+SGSGKPPSACCDGAKALS AATS  DKKAAC+CIKS A +V YN KLA+DLP NCGITLPFSISAGI
Subjt:  IVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGI

Query:  DCSKIS
        DCSKI+
Subjt:  DCSKIS

A0A5A7UYN6 Non-specific lipid-transfer protein3.4e-3778.85Show/hide
Query:  IVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGI
        I+  + LLL  S+A ISC+DVTKDLMPCVSYL+SGSGKPPSACCDGAKALS AATS  DKKAAC+CIKS A +V YN KLA+DLP NCGITLPFSISAGI
Subjt:  IVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGI

Query:  DCSK
        DCSK
Subjt:  DCSK

A0A6J1H5K9 Non-specific lipid-transfer protein1.5e-5399.12Show/hide
Query:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP
        MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYN KLAEDLPGNCGITLP
Subjt:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP

Query:  FSISAGIDCSKIS
        FSISAGIDCSKIS
Subjt:  FSISAGIDCSKIS

A0A6J1KW15 Non-specific lipid-transfer protein1.6e-5094.69Show/hide
Query:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP
        MASLKVT+  MMLLLLQESEAAISCNDVTK+LMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAG+VKYN KLAEDLPGNCGITLP
Subjt:  MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLP

Query:  FSISAGIDCSKIS
        FSISAGIDCSKIS
Subjt:  FSISAGIDCSKIS

SwissProt top hitse value%identityAlignment
Q42842 Non-specific lipid-transfer protein 4.37.4e-2146.85Show/hide
Query:  ASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPF
        A+  V +  +  +LL  ++AAISC  V+  L PC+SY      KPP ACC G K L+ AA S+ DK+AAC+CIKS AG +  N   A  +P  CG+++P+
Subjt:  ASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPF

Query:  SISAGIDCSKI
        +ISA +DCSKI
Subjt:  SISAGIDCSKI

Q43766 Non-specific lipid-transfer protein 32.8e-2044.64Show/hide
Query:  ASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVK-YNVKLAEDLPGNCGITLP
        A+  V +  +  +LL  ++AAISC  V+  L PC+SY      KPP ACC G K L+ AA S+ DK+AAC C+KS+A S+K  N+     +PG CG+++P
Subjt:  ASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVK-YNVKLAEDLPGNCGITLP

Query:  FSISAGIDCSKI
        F IS   DC+K+
Subjt:  FSISAGIDCSKI

Q43767 Non-specific lipid-transfer protein 4.11.5e-2147.75Show/hide
Query:  ASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPF
        AS  V +  +  +LL  ++AAISC  V+  L PC+SY      KPP+ACC G K L+ AA S+ DK+AAC+CIKS AG +  N   A  +P  CG+++P+
Subjt:  ASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPF

Query:  SISAGIDCSKI
        +ISA +DCSKI
Subjt:  SISAGIDCSKI

Q43875 Non-specific lipid-transfer protein 4.21.3e-2045.95Show/hide
Query:  ASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPF
        A+  V +  +  +L+  ++AAISC  V+  L PC+SY      KPP ACC G K L+ AA S+ DK+AAC+CIKS AG +  N   A  +P  CG+++P+
Subjt:  ASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPF

Query:  SISAGIDCSKI
        +ISA +DCSKI
Subjt:  SISAGIDCSKI

Q9ZPW9 Non-specific lipid-transfer protein 82.5e-2452.29Show/hide
Query:  LKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSI
        L +  V  +  + + SE+AISC+ V +DL PCVSYL SGSG PP  CCDG K+L+ A T+S DKKAAC+CIKSVA SV    +LA+ L  NCG +LP   
Subjt:  LKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSI

Query:  SAGIDCSKI
        S  +DC+ +
Subjt:  SAGIDCSKI

Arabidopsis top hitse value%identityAlignment
AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.7e-2552.29Show/hide
Query:  LKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSI
        L +  V  +  + + SE+AISC+ V +DL PCVSYL SGSG PP  CCDG K+L+ A T+S DKKAAC+CIKSVA SV    +LA+ L  NCG +LP   
Subjt:  LKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSI

Query:  SAGIDCSKI
        S  +DC+ +
Subjt:  SAGIDCSKI

AT3G08770.1 lipid transfer protein 67.4e-1641.12Show/hide
Query:  VCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYN---VKLAEDLPGNCGITLPFSISA
        VC ++L L   EAA+SCN V  DL PC+SY+  G G  P+ CC+G   L   A +S D++  C CIKS  G +  +   ++ A +LP  CG+ LP+  S 
Subjt:  VCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYN---VKLAEDLPGNCGITLPFSISA

Query:  GIDCSKI
          DC  I
Subjt:  GIDCSKI

AT3G08770.2 lipid transfer protein 62.8e-1541.35Show/hide
Query:  VCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYN---VKLAEDLPGNCGITLPFSISA
        VC ++L L   EAA+SCN V  DL PC+SY+  G G  P+ CC+G   L   A +S D++  C CIKS  G +  +   ++ A +LP  CG+ LP+  S 
Subjt:  VCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYN---VKLAEDLPGNCGITLPFSISA

Query:  GIDC
          DC
Subjt:  GIDC

AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.5e-1945.87Show/hide
Query:  VCMML--LLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYN---VKLAEDLPGNCGITLPFSI
        +C++L  +    SEAAISCN V  +L PCV Y++ G G  P +CC+G + LS  ATS+ DK+  C CIKSV G V Y+   +K A  LPG CG+ LP+ I
Subjt:  VCMML--LLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYN---VKLAEDLPGNCGITLPFSI

Query:  SAGIDCSKI
            +C+ I
Subjt:  SAGIDCSKI

AT5G59320.1 lipid transfer protein 33.3e-1640.19Show/hide
Query:  TIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVK-YNVKLAEDLPGNCGITLPFSISA
        T + + + ++   +AAISC  V   L PC +YL  G   PPS CC G K L+  A ++ D++ AC CI+S A S+   N  LA  LPG CG+++P+ IS 
Subjt:  TIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVK-YNVKLAEDLPGNCGITLPFSISA

Query:  GIDCSKI
          +C+ I
Subjt:  GIDCSKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTCTTAAAGTAACCATCGTGTGCATGATGCTATTGCTTCTTCAAGAATCAGAGGCAGCAATCTCATGCAATGACGTGACAAAGGACTTGATGCCATGCGTGAG
CTACCTCATGAGCGGCAGTGGGAAGCCGCCAAGCGCATGCTGCGATGGTGCCAAAGCGCTGTCATTGGCAGCCACAAGCAGTGATGACAAGAAGGCTGCATGCGAATGCA
TCAAATCAGTTGCTGGTAGTGTCAAATACAACGTTAAATTGGCTGAAGATCTTCCTGGAAATTGCGGCATTACACTGCCTTTTAGCATCTCAGCTGGAATTGACTGTTCC
AAGATTAGTTGA
mRNA sequenceShow/hide mRNA sequence
AATCCCATAAGCTACAAGCCATGGCATCTCTTAAAGTAACCATCGTGTGCATGATGCTATTGCTTCTTCAAGAATCAGAGGCAGCAATCTCATGCAATGACGTGACAAAG
GACTTGATGCCATGCGTGAGCTACCTCATGAGCGGCAGTGGGAAGCCGCCAAGCGCATGCTGCGATGGTGCCAAAGCGCTGTCATTGGCAGCCACAAGCAGTGATGACAA
GAAGGCTGCATGCGAATGCATCAAATCAGTTGCTGGTAGTGTCAAATACAACGTTAAATTGGCTGAAGATCTTCCTGGAAATTGCGGCATTACACTGCCTTTTAGCATCT
CAGCTGGAATTGACTGTTCCAAGATTAGTTGATTATGAGACAGGAGCTGGCACCATTCTACTATAAACTTGGAGAAATTAGTATATATATATTATGTAATCAAATAAAAT
AAAAGTAGCTGGAATGGAATCTAATC
Protein sequenceShow/hide protein sequence
MASLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDDKKAACECIKSVAGSVKYNVKLAEDLPGNCGITLPFSISAGIDCS
KIS