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Carg13485 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13485
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:3071996..3073198
RNA-Seq ExpressionCarg13485
SyntenyCarg13485
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593349.1 hypothetical protein SDJN03_12825, partial [Cucurbita argyrosperma subsp. sororia]4.2e-5699.09Show/hide
Query:  FPSCSPWFIRAHYFWYRRTQTIHPLFSLHCSEMHEAKEITLNIRHTNSNGEWRRGIRNVPKISRAIELVIGIRLNVEVVRYAALRYLSELLPLPEINLSV
        FPSCS WFIRAHYFWYRRTQTIHPLFSLHCSEMHEAKEITLNIRHTNSNGEWRRGIRNVPKISRAIELVIGIRLNVEVVRYAALRYLSELLPLPEINLSV
Subjt:  FPSCSPWFIRAHYFWYRRTQTIHPLFSLHCSEMHEAKEITLNIRHTNSNGEWRRGIRNVPKISRAIELVIGIRLNVEVVRYAALRYLSELLPLPEINLSV

Query:  EEAGFWFLNT
        EEAGFWFLNT
Subjt:  EEAGFWFLNT
KAG7025694.1 hypothetical protein SDJN02_12192, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-62100Show/hide
Query:  KCSYLQFQFPSCSPWFIRAHYFWYRRTQTIHPLFSLHCSEMHEAKEITLNIRHTNSNGEWRRGIRNVPKISRAIELVIGIRLNVEVVRYAALRYLSELLP
        KCSYLQFQFPSCSPWFIRAHYFWYRRTQTIHPLFSLHCSEMHEAKEITLNIRHTNSNGEWRRGIRNVPKISRAIELVIGIRLNVEVVRYAALRYLSELLP
Subjt:  KCSYLQFQFPSCSPWFIRAHYFWYRRTQTIHPLFSLHCSEMHEAKEITLNIRHTNSNGEWRRGIRNVPKISRAIELVIGIRLNVEVVRYAALRYLSELLP

Query:  LPEINLSVEEAGFWFLNT
        LPEINLSVEEAGFWFLNT
Subjt:  LPEINLSVEEAGFWFLNT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATGTTCATATCTGCAATTTCAGTTTCCCTCCTGTTCTCCATGGTTTATCCGAGCTCATTATTTCTGGTACAGGAGAACTCAAACCATCCATCCGCTCTTCAGTCTACA
TTGCTCTGAAATGCATGAAGCTAAAGAAATTACGCTGAACATTCGCCATACCAACTCTAATGGAGAATGGAGACGAGGAATTAGGAACGTGCCTAAAATATCACGAGCGA
TAGAACTCGTTATTGGAATCCGATTGAATGTGGAAGTTGTCCGGTATGCGGCGCTGAGATACTTGAGTGAGTTATTGCCTTTGCCAGAAATAAATCTCTCAGTGGAAGAA
GCCGGTTTTTGGTTTCTTAATACTTGA
mRNA sequenceShow/hide mRNA sequence
AAATGTTCATATCTGCAATTTCAGTTTCCCTCCTGTTCTCCATGGTTTATCCGAGCTCATTATTTCTGGTACAGGAGAACTCAAACCATCCATCCGCTCTTCAGTCTACA
TTGCTCTGAAATGCATGAAGCTAAAGAAATTACGCTGAACATTCGCCATACCAACTCTAATGGAGAATGGAGACGAGGAATTAGGAACGTGCCTAAAATATCACGAGCGA
TAGAACTCGTTATTGGAATCCGATTGAATGTGGAAGTTGTCCGGTATGCGGCGCTGAGATACTTGAGTGAGTTATTGCCTTTGCCAGAAATAAATCTCTCAGTGGAAGAA
GCCGGTTTTTGGTTTCTTAATACTTGA
Protein sequenceShow/hide protein sequence
KCSYLQFQFPSCSPWFIRAHYFWYRRTQTIHPLFSLHCSEMHEAKEITLNIRHTNSNGEWRRGIRNVPKISRAIELVIGIRLNVEVVRYAALRYLSELLPLPEINLSVEE
AGFWFLNT