CuGenDBv2

Gene ID	Carg13490
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein HEADING DATE REPRESSOR 1
Genome location	Carg_Chr08:3106454..3109552
RNA-Seq Expression	Carg13490
Synteny	Carg13490
Gene Ontology terms	GO:0009909 - regulation of flower development (biological process)
InterPro domains	IPR038864 - Protein heading date repressor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593354.1 Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. sororia]

3.0e-93

90.59

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
        MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD
        FDATAYPRGWLIGKKRKLVNVD                DREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAMLHDQVSMLMSMLEN GADGSD
Subjt:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD

Query:  EP
        EP
Subjt:  EP

KAG7025699.1 Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.3e-99

100

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
        MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVDDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSDEP
        FDATAYPRGWLIGKKRKLVNVDDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSDEP
Subjt:  FDATAYPRGWLIGKKRKLVNVDDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSDEP

XP_022959741.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucurbita moschata]

2.5e-95

91.09

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
        MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKH+EPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD
        FDATAYPRGWLIGKKRKLVNVD                DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAMLHDQVSMLMSMLENEGADGSD
Subjt:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD

Query:  EP
        EP
Subjt:  EP

XP_023004210.1 protein HEADING DATE REPRESSOR 1 [Cucurbita maxima]

8.0e-94

90.1

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
        MA DNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD
        FDATAYPRGWLIGKKRKLVNVD                DREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAMLHDQVSMLMSMLENEGADG D
Subjt:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD

Query:  EP
        EP
Subjt:  EP

XP_023515206.1 protein HEADING DATE REPRESSOR 1-like [Cucurbita pepo subsp. pepo]

1.8e-93

89.6

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
        MARDNSGKLDRILEGFSPASAPRIQWKSRRRSAT RILDNITQDHDAADKTSDKHE+PQPPKTLFPDLSDRRKALFEPLES+KNINGRRPSAESLLPPPD
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD
        FDATAYPRGWLIGKKRKLVNVD                DREI GLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAMLHDQVSMLMSMLENEGADGSD
Subjt:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD

Query:  EP
        EP
Subjt:  EP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UUH2 Protein HEADING DATE REPRESSOR 1-like isoform X2

2.0e-74

72.73

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEE-------PQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAE
        M  ++SGK+DRILEGFSPASAPRIQW SRRRSA+GR L   T+D D+A+KT DK EE        Q   T+ P+LS+RRKALFEPLE ++NINGRRPSAE
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEE-------PQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAE

Query:  SLLPPPDFDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLEN
        SLLPPPDFD T YPRGWLIGKKRKLVNVD                DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAMLHDQ++MLMSML+N
Subjt:  SLLPPPDFDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLEN

Query:  EGADGSDEP
        EGADGSDEP
Subjt:  EGADGSDEP

A0A6J1D3E7 protein HEADING DATE REPRESSOR 1

3.0e-78

73.81

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQ--------PPKTLFPDLSDRRKALFEPLESIKNINGRRPSA
        M RDNSGK+DRILEGFSPASAPRI WKSRRRSA+GR LD +T+DHD+A+K  DK EEP           + + P+LS+RR+ALFEPLE +KNINGRRPSA
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQ--------PPKTLFPDLSDRRKALFEPLESIKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLE
        ESLLPPPDFDATAYPRGWLIGKKRKLVNVD                DREIDGLNEQLDEDARCLEHLQ+QL+QEKSKRSE+ERENAMLHDQ++MLM+MLE
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

A0A6J1H5Q2 protein HEADING DATE REPRESSOR 1-like isoform X2

1.2e-95

91.09

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
        MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKH+EPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD
        FDATAYPRGWLIGKKRKLVNVD                DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAMLHDQVSMLMSMLENEGADGSD
Subjt:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD

Query:  EP
        EP
Subjt:  EP

A0A6J1H766 protein HEADING DATE REPRESSOR 1-like isoform X1

9.5e-77

88.89

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Query:  SATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVD---------
        +ATGRILDNITQDHDAADKTSDKH+EPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVD         
Subjt:  SATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVD---------

Query:  -------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSDEP
               DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAMLHDQVSMLMSMLENEGADGSDEP
Subjt:  -------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSDEP

A0A6J1KTY5 protein HEADING DATE REPRESSOR 1

3.9e-94

90.1

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Query:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
        MA DNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD
Subjt:  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD
        FDATAYPRGWLIGKKRKLVNVD                DREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAMLHDQVSMLMSMLENEGADG D
Subjt:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD

Query:  EP
        EP
Subjt:  EP

SwissProt top hits

e value

%identity

Alignment

B8AE37 Protein HEADING DATE REPRESSOR 1

5.8e-39

53.43

Show/hide

Query:  PASA--PRIQWKSRRRSAT--GRILDNITQDHDAADK--TSDKHEEP---------QPPKTLFPD----LSDRRKALFEPLESIKNINGRRPSAESLLPP
        PASA  PRI WKSRRRSA+  GR L     + +AAD+   +  HEE               + PD    LS++RKALFEPLE    ING+R SAE LLPP
Subjt:  PASA--PRIQWKSRRRSAT--GRILDNITQDHDAADK--TSDKHEEP---------QPPKTLFPD----LSDRRKALFEPLESIKNINGRRPSAESLLPP

Query:  PDFDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSML-ENEGAD
        PDF+  +YP+GWL+GKKRKLVNVD                DREI+GLNEQL+ED+R LE LQ QL  E+ KR+EIE+EN+MLH+QVSMLM+ML ENE  D
Subjt:  PDFDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSML-ENEGAD

Query:  GSDE
           E
Subjt:  GSDE

Q6K678 Protein HEADING DATE REPRESSOR 1

5.8e-39

53.43

Show/hide

Query:  PASA--PRIQWKSRRRSAT--GRILDNITQDHDAADK--TSDKHEEP---------QPPKTLFPD----LSDRRKALFEPLESIKNINGRRPSAESLLPP
        PASA  PRI WKSRRRSA+  GR L     + +AAD+   +  HEE               + PD    LS++RKALFEPLE    ING+R SAE LLPP
Subjt:  PASA--PRIQWKSRRRSAT--GRILDNITQDHDAADK--TSDKHEEP---------QPPKTLFPD----LSDRRKALFEPLESIKNINGRRPSAESLLPP

Query:  PDFDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSML-ENEGAD
        PDF+  +YP+GWL+GKKRKLVNVD                DREI+GLNEQL+ED+R LE LQ QL  E+ KR+EIE+EN+MLH+QVSMLM+ML ENE  D
Subjt:  PDFDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSML-ENEGAD

Query:  GSDE
           E
Subjt:  GSDE

Arabidopsis top hits

e value

%identity

Alignment

AT1G80940.1 unknown protein

1.1e-48

53.47

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Query:  DRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDA-ADKTSDKH-------EEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRP-SAESLLPPPD
        D  + GF P S  +I WKSR+RSA    L N+ +  +A  + T +K+       E+   P T  P LS++RKALFEPLE I N+NG+RP +A+SLLPPPD
Subjt:  DRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDA-ADKTSDKH-------EEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRP-SAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD
        F+   YP+GWLIGKKRKLVNVD                DREIDGLNEQL+ED+RCLEHLQ+QLLQE+SKR+EIEREN ML +QV ML++M++ +  +G++
Subjt:  FDATAYPRGWLIGKKRKLVNVD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSD

Query:  EP
        EP
Subjt:  EP

AT1G80940.2 unknown protein

4.9e-25

52.46

Show/hide

Query:  DRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDA-ADKTSDKH-------EEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRP-SAESLLPPPD
        D  + GF P S  +I WKSR+RSA    L N+ +  +A  + T +K+       E+   P T  P LS++RKALFEPLE I N+NG+RP +A+SLLPPPD
Subjt:  DRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDA-ADKTSDKH-------EEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRP-SAESLLPPPD

Query:  FDATAYPRGWLIGKKRKLVNVD
        F+   YP+GWLIGKKRKLVNVD
Subjt:  FDATAYPRGWLIGKKRKLVNVD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGCGCGATAATTCCGGTAAGCTAGATAGGATTCTGGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCAGTGGAAATCTCGCCGGAGATCAGCTACCGGGAGGAT
CTTAGACAACATAACTCAAGATCATGATGCTGCTGACAAAACATCCGACAAACACGAAGAACCTCAGCCCCCTAAAACACTCTTCCCCGACCTCTCCGACCGTCGAAAGG
CCCTCTTTGAGCCTTTAGAATCCATCAAAAACATCAATGGCCGCAGACCATCAGCTGAATCCTTACTCCCTCCACCCGACTTCGACGCCACCGCATATCCCCGAGGCTGG
CTGATCGGAAAGAAGCGAAAACTCGTCAATGTCGACGACCGAGAAATCGACGGTCTGAATGAGCAGCTCGACGAGGACGCGCGCTGCTTAGAACATCTTCAAATTCAACT
TCTGCAAGAGAAGAGCAAAAGATCAGAGATTGAAAGAGAAAATGCAATGCTGCATGATCAAGTAAGTATGCTAATGAGCATGCTGGAAAATGAAGGAGCTGATGGCTCAG
ATGAACCTTAA

mRNA sequence

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Protein sequence

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MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW
LIGKKRKLVNVDDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAMLHDQVSMLMSMLENEGADGSDEP

Carg13490 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome