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Carg13495 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13495
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:3126125..3128200
RNA-Seq ExpressionCarg13495
SyntenyCarg13495
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058699.1 hypothetical protein E6C27_scaffold339G001690 [Cucumis melo var. makuwa]3.6e-4192.23Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKL
        LTEE+GSCNMVLDSVLSSPHRRSPSFRK+F PNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC GLTG QKAQCQLELAKTS+AKGKL
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKL

Query:  KIL
        KIL
Subjt:  KIL
KAG6593358.1 hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sororia]3.4e-47100Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK
        LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK

Query:  IL
        IL
Subjt:  IL
KAG7025704.1 hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-53100Show/hide
Query:  MVALDHIEEPLTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELA
        MVALDHIEEPLTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELA
Subjt:  MVALDHIEEPLTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELA

Query:  KTSMAKGKLKIL
        KTSMAKGKLKIL
Subjt:  KTSMAKGKLKIL
XP_022959742.1 uncharacterized protein LOC111460722 [Cucurbita moschata]1.6e-41100Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
XP_023004762.1 uncharacterized protein LOC111497967 [Cucurbita maxima]2.1e-4198.92Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
TrEMBL top hitse value%identityAlignment
A0A0A0K6S1 Uncharacterized protein1.1e-4092.23Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKL
        LTEE GSC MVLDSVLSSPHRRSPSFRK+F PNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC GLTG QKAQC LELAKTSMAKGKL
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKL

Query:  KIL
        KIL
Subjt:  KIL
A0A5D3CG60 Uncharacterized protein1.7e-4192.23Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKL
        LTEE+GSCNMVLDSVLSSPHRRSPSFRK+F PNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC GLTG QKAQCQLELAKTS+AKGKL
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKL

Query:  KIL
        KIL
Subjt:  KIL
A0A6J1DQE0 uncharacterized protein LOC1110221412.2e-3690.43Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRK FPPNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC G+TG QK QC+LELAK SMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
A0A6J1H8Z6 uncharacterized protein LOC1114607227.8e-42100Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
A0A6J1KRB5 uncharacterized protein LOC1114979671.0e-4198.92Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16170.1 unknown protein7.3e-2463.44Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGS--SSCSGLTGAQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR    +K +  +ELGSWSTL+QRH++LLTAL LL FLCT+YLYFAVTLG+  SSC GLTG  KA CQL+L + +++KGKLK
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGS--SSCSGLTGAQKAQCQLELAKTSMAKGKLK
AT1G79660.1 unknown protein8.9e-2259.14Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSS--CSGLTGAQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR  + +K +  ++LGS ST+VQRHRFLLTA++LL FLCTIY+YFAVTLG+    CSG+TG  KA CQ+E  + S + GKLK
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSS--CSGLTGAQKAQCQLELAKTSMAKGKLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCCCTAGACCACATCGAAGAGCCGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCACAGGAGGTCCCCATCATTCCG
AAAGGCCTTTCCTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTTCAGCGACATCGCTTCCTCCTCACAGCACTTGTCCTCTTGACTTTTCTTTGCACGATTTACCTTT
ACTTTGCTGTCACCTTAGGCTCTTCCTCTTGCTCTGGACTGACTGGGGCGCAAAAGGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAA
ATTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCCCTAGACCACATCGAAGAGCCGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCACAGGAGGTCCCCATCATTCCG
AAAGGCCTTTCCTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTTCAGCGACATCGCTTCCTCCTCACAGCACTTGTCCTCTTGACTTTTCTTTGCACGATTTACCTTT
ACTTTGCTGTCACCTTAGGCTCTTCCTCTTGCTCTGGACTGACTGGGGCGCAAAAGGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAA
ATTCTTTAATACTCGGGTTAGTGCTCTGCAATTTGTGCATTTTGTTTGTAATTCCGAACCATTTGGGTTGAAGATTT
Protein sequenceShow/hide protein sequence
MVALDHIEEPLTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK
IL