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Carg13547 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13547
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF1218)
Genome locationCarg_Chr02:736334..737592
RNA-Seq ExpressionCarg13547
SyntenyCarg13547
Gene Ontology termsGO:0009855 - determination of bilateral symmetry (biological process)
GO:0010087 - phloem or xylem histogenesis (biological process)
GO:0010305 - leaf vascular tissue pattern formation (biological process)
GO:0010588 - cotyledon vascular tissue pattern formation (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151872.1 uncharacterized protein LOC101212188 [Cucumis sativus]8.6e-7387.26Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS++ELEKSPPN+QISI CL+FT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        WIILAVGMS+LVIGA+ N+KSR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

XP_008455827.1 PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo]6.6e-7387.9Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS++ELEKSPPN+QISI CLVFT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        WIILAVGMS+LVIGA+ N+KSR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

XP_022947582.1 uncharacterized protein LOC111451405 [Cucurbita moschata]5.0e-81100Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY
        WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY

XP_022971119.1 uncharacterized protein LOC111469886 [Cucurbita maxima]4.7e-7997.45Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCIC KEELEKSPPNKQISIGCLVFT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        WIILAVGMSLLVIGALANSKSRTSCGF+HHHFLSMGGILCF+HGLFCVAYYVSSTVA
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

XP_023533398.1 uncharacterized protein LOC111795298 [Cucurbita pepo subsp. pepo]1.9e-8098.1Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY
        WII+AVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCF+HGLFCVAYYVSSTVAY
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY

TrEMBL top hitse value%identityAlignment
A0A0A0LR43 Uncharacterized protein4.2e-7387.26Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS++ELEKSPPN+QISI CL+FT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        WIILAVGMS+LVIGA+ N+KSR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

A0A1S3C1S7 uncharacterized protein LOC1034959273.2e-7387.9Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS++ELEKSPPN+QISI CLVFT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        WIILAVGMS+LVIGA+ N+KSR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

A0A6J1FUW3 uncharacterized protein LOC1114490221.6e-6984.71Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVLVCLL+VAMDIVAGLL IEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+LGLAH+IANLLGG NCICS+E LEKSPPNKQISI CLVFT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        WIILAV MS+LVIGAL N+KSR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

A0A6J1G6V2 uncharacterized protein LOC1114514052.4e-81100Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY
        WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY

A0A6J1I7N7 uncharacterized protein LOC1114698862.3e-7997.45Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT
        MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCIC KEELEKSPPNKQISIGCLVFT
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFT

Query:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        WIILAVGMSLLVIGALANSKSRTSCGF+HHHFLSMGGILCF+HGLFCVAYYVSSTVA
Subjt:  WIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05291.1 Protein of unknown function (DUF1218)2.1e-2138.61Show/hide
Query:  VLVCL-LIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSK--EELEKSPPNK---QISIGCLVF
        ++VC+ L V +DIVAG + ++A  AQ  VKH +L   EC+ PS+ AF LG+ A   L  AH+ AN++G   C  S   + L   P NK     ++ CL  
Subjt:  VLVCL-LIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSK--EELEKSPPNK---QISIGCLVF

Query:  TWIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
         W++   G  +L  G  +N++SR  C F+++H  S+GG +CF+H +    YY+SS VA
Subjt:  TWIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

AT1G11500.1 Protein of unknown function (DUF1218)9.3e-2540.99Show/hide
Query:  VGVLVCLLIVAMDIVAGLLAIEADIAQNKV------KHLRLWIFEC-RDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGC
        +G LV ++I+  DI A +L IEA+IAQ+K       +H R     C R PS+ AF  G+ A  LL + H++AN+LGG   I SK++ +++  NK +++  
Subjt:  VGVLVCLLIVAMDIVAGLLAIEADIAQNKV------KHLRLWIFEC-RDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGC

Query:  LVFTWIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        LV +WI   V  S L+IG LANS++   C   H  F  +GGI C  HG+   AYYVS+  A
Subjt:  LVFTWIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

AT2G32280.1 Protein of unknown function (DUF1218)2.4e-5762.18Show/hide
Query:  KLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTW
        K+ G+LVCL+IV +D+ A +L I+A++AQN+VKH+RLW+FECR+PS+ AF+LGLGAA +L +AH++ NL+GG  CICS++E ++S   +QIS+ CLV TW
Subjt:  KLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTW

Query:  IILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        I+ AVG   +VIG ++NSKSR+SCGF+HHHFLS+GGILCF+H LFCVAYYVS+T A
Subjt:  IILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA

AT4G21310.1 Protein of unknown function (DUF1218)4.3e-5462.34Show/hide
Query:  VGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWII
        VG  +C+LI+AMD+ AG+L IEA+IAQNKVKHL++WIFECRDPS  AFK GL A  LL LAH+ AN LGG  C+ S+++LEKS  NKQ+++  L+FTWII
Subjt:  VGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWII

Query:  LAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA
        LA+  S+L++G +ANS+SR +CG SHH  LS+GGILCF+HGLF VAYY+S+T +
Subjt:  LAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGGTTGGCGTGTTGGTTTGTTTGCTGATTGTAGCTATGGATATTGTGGCTGGCTTGCTCGCCATCGAAGCTGATATTGCACAAAACAAGGTGAAGCACTTGCG
TCTGTGGATATTCGAGTGCAGAGACCCAAGTGAGCAGGCTTTCAAATTGGGGCTAGGAGCAGCAGGGCTGCTGGGATTAGCCCACATAATTGCTAATTTGTTGGGGGGTT
TCAATTGCATTTGCTCTAAGGAAGAGCTTGAGAAATCTCCCCCCAACAAACAGATCTCCATCGGATGCCTTGTTTTCACCTGGATAATTCTAGCGGTGGGAATGTCGTTG
CTGGTGATTGGGGCATTGGCGAACAGTAAATCAAGAACTTCTTGTGGATTTTCGCATCATCACTTTCTGTCGATGGGAGGGATTTTGTGTTTCATTCATGGCTTGTTTTG
TGTTGCTTATTATGTTTCTTCCACGGTTGCTTATTAA
mRNA sequenceShow/hide mRNA sequence
TTTGATAGAAAGAAGAAAAGGATACCATGAAGTTGGTTGGCGTGTTGGTTTGTTTGCTGATTGTAGCTATGGATATTGTGGCTGGCTTGCTCGCCATCGAAGCTGATATT
GCACAAAACAAGGTGAAGCACTTGCGTCTGTGGATATTCGAGTGCAGAGACCCAAGTGAGCAGGCTTTCAAATTGGGGCTAGGAGCAGCAGGGCTGCTGGGATTAGCCCA
CATAATTGCTAATTTGTTGGGGGGTTTCAATTGCATTTGCTCTAAGGAAGAGCTTGAGAAATCTCCCCCCAACAAACAGATCTCCATCGGATGCCTTGTTTTCACCTGGA
TAATTCTAGCGGTGGGAATGTCGTTGCTGGTGATTGGGGCATTGGCGAACAGTAAATCAAGAACTTCTTGTGGATTTTCGCATCATCACTTTCTGTCGATGGGAGGGATT
TTGTGTTTCATTCATGGCTTGTTTTGTGTTGCTTATTATGTTTCTTCCACGGTTGCTTATTAA
Protein sequenceShow/hide protein sequence
MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSL
LVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY