; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13560 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13560
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:684204..684705
RNA-Seq ExpressionCarg13560
SyntenyCarg13560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034940.1 hypothetical protein SDJN02_01733, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-59100Show/hide
Query:  MALRTAETVGMYAVLLRASSHVSPISWQSLLNILVALSVVLYLLECAEAFGATGVGCVAAILLQITHCRRWGGVVEAGEIECCWTRQGTYLVETNSTEAQ
        MALRTAETVGMYAVLLRASSHVSPISWQSLLNILVALSVVLYLLECAEAFGATGVGCVAAILLQITHCRRWGGVVEAGEIECCWTRQGTYLVETNSTEAQ
Subjt:  MALRTAETVGMYAVLLRASSHVSPISWQSLLNILVALSVVLYLLECAEAFGATGVGCVAAILLQITHCRRWGGVVEAGEIECCWTRQGTYLVETNSTEAQ

Query:  YSVAAGIGLRNSDVSLHQRVL
        YSVAAGIGLRNSDVSLHQRVL
Subjt:  YSVAAGIGLRNSDVSLHQRVL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTTAGAACCGCTGAAACTGTTGGAATGTACGCCGTTTTGTTGCGAGCGAGCAGCCATGTTAGCCCCATCAGTTGGCAGTCTCTGTTGAACATTTTGGTTGCTCT
TTCGGTGGTGCTGTACCTTTTGGAGTGCGCCGAGGCATTTGGTGCAACCGGAGTAGGATGCGTTGCGGCAATTCTTCTCCAGATCACGCACTGCCGACGTTGGGGTGGCG
TTGTGGAAGCCGGAGAGATTGAATGCTGCTGGACAAGACAAGGAACTTATCTGGTGGAGACGAATTCCACAGAAGCACAATACAGCGTCGCAGCTGGAATTGGGCTGCGG
AATTCTGATGTTTCGCTTCACCAACGAGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTTAGAACCGCTGAAACTGTTGGAATGTACGCCGTTTTGTTGCGAGCGAGCAGCCATGTTAGCCCCATCAGTTGGCAGTCTCTGTTGAACATTTTGGTTGCTCT
TTCGGTGGTGCTGTACCTTTTGGAGTGCGCCGAGGCATTTGGTGCAACCGGAGTAGGATGCGTTGCGGCAATTCTTCTCCAGATCACGCACTGCCGACGTTGGGGTGGCG
TTGTGGAAGCCGGAGAGATTGAATGCTGCTGGACAAGACAAGGAACTTATCTGGTGGAGACGAATTCCACAGAAGCACAATACAGCGTCGCAGCTGGAATTGGGCTGCGG
AATTCTGATGTTTCGCTTCACCAACGAGTTTTGTAA
Protein sequenceShow/hide protein sequence
MALRTAETVGMYAVLLRASSHVSPISWQSLLNILVALSVVLYLLECAEAFGATGVGCVAAILLQITHCRRWGGVVEAGEIECCWTRQGTYLVETNSTEAQYSVAAGIGLR
NSDVSLHQRVL