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Carg13562 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13562
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWound-responsive family protein
Genome locationCarg_Chr02:676090..676341
RNA-Seq ExpressionCarg13562
SyntenyCarg13562
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047914.1 wound-responsive family protein [Cucumis melo var. makuwa]2.2e-1152.17Show/hide
Query:  MSYLG---RVWMAASVAVVHGGQSDGRHGSA-EGILTLHR-----NAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYLG   R+WM ASVAVV  GQSDG H  A +G+++L +     +AETT  AV+LR  S+A +    D   +   +ESLRRVMY NCWGQG
Subjt:  MSYLG---RVWMAASVAVVHGGQSDGRHGSA-EGILTLHR-----NAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG

KAE8703090.1 putative structural molecule [Hibiscus syriacus]5.1e-0850Show/hide
Query:  MSYLGRVWMAASVAVVHG-GQSDGRHGSAEGILTLHRNAETTA--VAVDLRQFSTA--TSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYL RVWMA SVAVV G G+++G+   + GI  L R           D R  S A  +  S   G+ +GQADES+RRVMY NCWGQG
Subjt:  MSYLGRVWMAASVAVVHG-GQSDGRHGSAEGILTLHRNAETTA--VAVDLRQFSTA--TSHSNRDGDEKGQADESLRRVMYFNCWGQG

KAF3948378.1 hypothetical protein CMV_025616 [Castanea mollissima]8.7e-0846.81Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAE-----TTAVAVDLRQFSTATSH------SNRDGDEKGQADESLRRVMYFNCWGQG
        MSYL RVWMAASVAVV G    G+     G+ +L          T + A DLRQ S            NRDG+ + ++DESLRR+MY NCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAE-----TTAVAVDLRQFSTATSH------SNRDGDEKGQADESLRRVMYFNCWGQG

KAG6604822.1 Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia]3.3e-39100Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG

KAG7034937.1 hypothetical protein SDJN02_01730, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-39100Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG

TrEMBL top hitse value%identityAlignment
A0A444Y6H0 Uncharacterized protein4.2e-0841.05Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAE---TTAVAVDLRQFS---------TATSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV   G +D  H     + ++H N     +     DLR  S          AT + +   D +GQ D+SLR+VMY +CWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAE---TTAVAVDLRQFS---------TATSHSNRDGDEKGQADESLRRVMYFNCWGQG

A0A445BXP3 Uncharacterized protein4.2e-0842.11Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVA---VDLRQFS---------TATSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV   G +D  H     + ++H N      A    DLR  S          AT + +   D +GQ D+SLR+VMY +CWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVA---VDLRQFS---------TATSHSNRDGDEKGQADESLRRVMYFNCWGQG

A0A5A7TY19 Wound-responsive family protein1.1e-1152.17Show/hide
Query:  MSYLG---RVWMAASVAVVHGGQSDGRHGSA-EGILTLHR-----NAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYLG   R+WM ASVAVV  GQSDG H  A +G+++L +     +AETT  AV+LR  S+A +    D   +   +ESLRRVMY NCWGQG
Subjt:  MSYLG---RVWMAASVAVVHGGQSDGRHGSA-EGILTLHR-----NAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG

A0A6A3AEW0 Putative structural molecule2.5e-0850Show/hide
Query:  MSYLGRVWMAASVAVVHG-GQSDGRHGSAEGILTLHRNAETTA--VAVDLRQFSTA--TSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYL RVWMA SVAVV G G+++G+   + GI  L R           D R  S A  +  S   G+ +GQADES+RRVMY NCWGQG
Subjt:  MSYLGRVWMAASVAVVHG-GQSDGRHGSAEGILTLHRNAETTA--VAVDLRQFSTA--TSHSNRDGDEKGQADESLRRVMYFNCWGQG

A0A6P4B4P2 uncharacterized protein LOC1074621434.2e-0842.11Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVA---VDLRQFS---------TATSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV   G +D  H     + ++H N      A    DLR  S          AT + +   D +GQ D+SLR+VMY +CWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVA---VDLRQFS---------TATSHSNRDGDEKGQADESLRRVMYFNCWGQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28240.1 Wound-responsive family protein3.5e-0738.2Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTA------TSHSNRDGDEKGQADESLRRVMYFNCWGQG
        MSYL +VWMAAS   V G    G      G+ + HR      ++ DLR  + A           R        DESLR+VMY NCW QG
Subjt:  MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTA------TSHSNRDGDEKGQADESLRRVMYFNCWGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATCTAGGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGGCCGACACGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAA
TGCGGAAACAACCGCCGTAGCTGTAGATCTCCGCCAATTTTCAACAGCGACGAGTCACTCGAATCGCGATGGAGACGAGAAGGGGCAAGCCGATGAGTCTCTCCGCCGAG
TTATGTACTTCAATTGCTGGGGCCAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATCTAGGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGGCCGACACGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAA
TGCGGAAACAACCGCCGTAGCTGTAGATCTCCGCCAATTTTCAACAGCGACGAGTCACTCGAATCGCGATGGAGACGAGAAGGGGCAAGCCGATGAGTCTCTCCGCCGAG
TTATGTACTTCAATTGCTGGGGCCAAGGCTGA
Protein sequenceShow/hide protein sequence
MSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG