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Carg13566 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13566
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSYP124 protein
Genome locationCarg_Chr02:661538..663436
RNA-Seq ExpressionCarg13566
SyntenyCarg13566
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604817.1 hypothetical protein SDJN03_02134, partial [Cucurbita argyrosperma subsp. sororia]9.1e-44100Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
        MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
KAG7034933.1 hypothetical protein SDJN02_01726, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-49100Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLLSLLSMRS
        MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLLSLLSMRS
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLLSLLSMRS
XP_022944460.1 uncharacterized protein LOC111448907 [Cucurbita moschata]4.2e-4191.4Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLL
        MATLAA A RQARALTRVSSPQS +TLIQRRGLAGAADHHGPPKVNCW DPMSPSKWKEEHFVIVSLSGWGLLF+GGYKFFTGGKGKKDE L+
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLL
XP_022970685.1 uncharacterized protein LOC111469597 [Cucurbita maxima]5.9e-4397.78Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
        MATLAATAVRQARALTR SSPQST+TLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
XP_023532872.1 uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo]7.7e-4397.78Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
        MATLAA AVRQARALTRVSSPQST+TLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
TrEMBL top hitse value%identityAlignment
A0A1S3BJS2 uncharacterized protein LOC1034904676.1e-3883.87Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLL
        MATLAA AVRQARAL RVSSPQST+ LI +RGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFV+VSLSGWG+L +GGYKFFT GKG KDE ++
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLL
A0A5A7U364 Uncharacterized protein1.2e-3885.11Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLLS
        MATLAA AVRQARAL RVSSPQST+ LI +RGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFV+VSLSGWGLL +GGYKFFT GKG KDE+ +S
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLLS
A0A6J1CEY6 uncharacterized protein LOC1110110681.3e-4090.32Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLL
        MATLAA AVRQARALTRVSSPQST+TLI RRGLAGAADHHGPPKVNCW+DPMSPSKWKEEHFVIVSLSGWGLLF+GGYKFFT GKGKK+E L+
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLL
A0A6J1FYP0 uncharacterized protein LOC1114489072.0e-4191.4Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLL
        MATLAA A RQARALTRVSSPQS +TLIQRRGLAGAADHHGPPKVNCW DPMSPSKWKEEHFVIVSLSGWGLLF+GGYKFFTGGKGKKDE L+
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLL
A0A6J1I3K1 uncharacterized protein LOC1114695972.8e-4397.78Show/hide
Query:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
        MATLAATAVRQARALTR SSPQST+TLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
Subjt:  MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20820.1 unknown protein6.7e-2156.63Show/hide
Query:  ATAVRQARALTRVSSPQSTS---TLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGK
        A+  R+A +L ++ S + +S   ++ QRR LAGAADHHG  KV+ W+ P +P  WKEEHFV++SLSGWGLLFY GYK  TGGK
Subjt:  ATAVRQARALTRVSSPQSTS---TLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGK
AT2G20820.2 unknown protein5.9e-0945.9Show/hide
Query:  ATAVRQARALTRVSSPQSTS---TLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFV
        A+  R+A +L ++ S + +S   ++ QRR LAGAADHHG  KV+ W+ P +P  WKEEH++
Subjt:  ATAVRQARALTRVSSPQSTS---TLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTAGCGGCTACAGCAGTTCGTCAAGCTAGGGCCCTAACTCGGGTTTCCTCTCCTCAGTCAACCTCCACCCTTATTCAAAGGCGCGGTCTCGCTGGCGCTGC
CGACCACCATGGACCGCCGAAGGTTAACTGTTGGCAAGATCCTATGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCTGGATGGGGTCTACTTT
TCTATGGAGGGTACAAGTTCTTTACCGGGGGCAAGGGAAAGAAGGATGAGGTACTTCTTTCCTTATTATCTATGCGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTTAGCGGCTACAGCAGTTCGTCAAGCTAGGGCCCTAACTCGGGTTTCCTCTCCTCAGTCAACCTCCACCCTTATTCAAAGGCGCGGTCTCGCTGGCGCTGC
CGACCACCATGGACCGCCGAAGGTTAACTGTTGGCAAGATCCTATGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCTGGATGGGGTCTACTTT
TCTATGGAGGGTACAAGTTCTTTACCGGGGGCAAGGGAAAGAAGGATGAGGTACTTCTTTCCTTATTATCTATGCGCTCTTAA
Protein sequenceShow/hide protein sequence
MATLAATAVRQARALTRVSSPQSTSTLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFYGGYKFFTGGKGKKDEVLLSLLSMRS