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Carg13575 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13575
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr02:610843..611256
RNA-Seq ExpressionCarg13575
SyntenyCarg13575
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0010375 - stomatal complex patterning (biological process)
GO:2000122 - negative regulation of stomatal complex development (biological process)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604806.1 ELMO domain-containing protein A, partial [Cucurbita argyrosperma subsp. sororia]4.7e-29100Show/hide
Query:  MTPTKASILVVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMV
        MTPTKASILVVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMV
Subjt:  MTPTKASILVVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMV

KAG7034925.1 Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-48100Show/hide
Query:  MTPTKASILVVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
        MTPTKASILVVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
Subjt:  MTPTKASILVVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP

PHT73093.1 Protein EPIDERMAL PATTERNING FACTOR 1 [Capsicum annuum]1.3e-2355.34Show/hide
Query:  SILVVAVLLIVILQVPTAMPARHLPPHNS-----------PKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSF
        S++ +A ++IV++ +P  M ARH+P  NS             R R +T+ VAGSRLPDCSHACGSC PCRLVMV + CSS+E++ETCP+AYKCMC +KS+
Subjt:  SILVVAVLLIVILQVPTAMPARHLPPHNS-----------PKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSF

Query:  PVP
        PVP
Subjt:  PVP

XP_015060695.1 protein EPIDERMAL PATTERNING FACTOR 1 [Solanum pennellii]4.3e-2257.43Show/hide
Query:  TKASILVVAVLLIVILQ-VPTAMPARHLPPHNSPKR-----VRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPV
        T  S   +A+++IV L  +P  M AR +P  NS +R      R  T++VAGSRLPDCSHACGSC PCRLVMV + CSS+E++ETCP+AYKCMC +KS+PV
Subjt:  TKASILVVAVLLIVILQ-VPTAMPARHLPPHNSPKR-----VRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPV

Query:  P
        P
Subjt:  P

XP_022140689.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Momordica charantia]2.3e-2368.89Show/hide
Query:  VVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFC-SSVEDSETCPLAYKCMCSHKSFPVP
        VV VL+IV L V T   ARH+       R RGETV++AGSRLPDCSHACG C+PCRLVMVRY C ++VEDSETCP AYKCMC+ KSFPVP
Subjt:  VVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFC-SSVEDSETCPLAYKCMCSHKSFPVP

TrEMBL top hitse value%identityAlignment
A0A178VX97 Epidermal patterning factor-like protein2.7e-2261.18Show/hide
Query:  ARHLPPHNSP-------------KRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
        ARHLP  + P             +R R +TV+VAGSRLPDCSHACGSC+PCRLVMV + C+SVE++ETCP+AYKCMC++KS+PVP
Subjt:  ARHLPPHNSP-------------KRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP

A0A2G2YTN2 Epidermal patterning factor-like protein6.5e-2455.34Show/hide
Query:  SILVVAVLLIVILQVPTAMPARHLPPHNS-----------PKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSF
        S++ +A ++IV++ +P  M ARH+P  NS             R R +T+ VAGSRLPDCSHACGSC PCRLVMV + CSS+E++ETCP+AYKCMC +KS+
Subjt:  SILVVAVLLIVILQVPTAMPARHLPPHNS-----------PKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSF

Query:  PVP
        PVP
Subjt:  PVP

A0A6J1CGD5 Epidermal patterning factor-like protein1.1e-2368.89Show/hide
Query:  VVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFC-SSVEDSETCPLAYKCMCSHKSFPVP
        VV VL+IV L V T   ARH+       R RGETV++AGSRLPDCSHACG C+PCRLVMVRY C ++VEDSETCP AYKCMC+ KSFPVP
Subjt:  VVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFC-SSVEDSETCPLAYKCMCSHKSFPVP

A0A6N2AZG3 Epidermal patterning factor-like protein2.1e-2256.73Show/hide
Query:  MTPTKASILVVAVLLIVILQ-VPTAMPARHLPPHNSPKR-----VRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKS
        M  T  S   +A+++IV L  +P  M AR +P  NS +R      R  T++VAGSRLPDCSHACGSC PCRLVMV + CSS+E++ETCP+AYKCMC +KS
Subjt:  MTPTKASILVVAVLLIVILQ-VPTAMPARHLPPHNSPKR-----VRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKS

Query:  FPVP
        +PVP
Subjt:  FPVP

M1ADB5 Epidermal patterning factor-like protein3.5e-2250.47Show/hide
Query:  VVAVLLIVILQVPTAMPARHLPPHNSPKR------------------VRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCS
        +  +++I+++ +P  M ARH+P  NS +R                   R +T++VAGSRLPDCSHACGSC PCRLVMV + CSS+E++ETCP+AYKCMC 
Subjt:  VVAVLLIVILQVPTAMPARHLPPHNSPKR------------------VRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCS

Query:  HKSFPVP
        +KS+PVP
Subjt:  HKSFPVP

SwissProt top hitse value%identityAlignment
C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 71.3e-1051.85Show/hide
Query:  EVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
        + +GS +PDCS+ACG C PC+LV++   CS+   SE CPL YKC+C  K + VP
Subjt:  EVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP

Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 23.7e-0847.06Show/hide
Query:  GSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
        GS LPDCS+ACG+C+PC+ VM+ + CS    +E+C + Y+C C  + + VP
Subjt:  GSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP

Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 17.3e-2561.18Show/hide
Query:  ARHLPPHNSP-------------KRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
        ARHLP  + P             +R R +TV+VAGSRLPDCSHACGSC+PCRLVMV + C+SVE++ETCP+AYKCMC++KS+PVP
Subjt:  ARHLPPHNSP-------------KRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP

Arabidopsis top hitse value%identityAlignment
AT1G34245.1 Putative membrane lipoprotein2.6e-0947.06Show/hide
Query:  GSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
        GS LPDCS+ACG+C+PC+ VM+ + CS    +E+C + Y+C C  + + VP
Subjt:  GSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP

AT1G71866.1 LOCATED IN: endomembrane system9.5e-1251.85Show/hide
Query:  EVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
        + +GS +PDCS+ACG C PC+LV++   CS+   SE CPL YKC+C  K + VP
Subjt:  EVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP

AT2G20875.1 epidermal patterning factor 15.2e-2661.18Show/hide
Query:  ARHLPPHNSP-------------KRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP
        ARHLP  + P             +R R +TV+VAGSRLPDCSHACGSC+PCRLVMV + C+SVE++ETCP+AYKCMC++KS+PVP
Subjt:  ARHLPPHNSP-------------KRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCCACAAAGGCTTCAATTCTGGTCGTCGCTGTTCTTCTCATTGTCATCCTTCAAGTTCCCACAGCCATGCCCGCCAGACACCTCCCGCCTCATAATAGTCCAAA
GCGAGTGAGGGGCGAGACGGTGGAAGTTGCAGGGTCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCGCGCCATGCAGGCTTGTGATGGTTAGATACTTTTGTT
CTTCGGTTGAAGACTCGGAGACTTGTCCCTTGGCTTACAAGTGCATGTGCAGCCACAAGTCCTTCCCTGTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACACCCACAAAGGCTTCAATTCTGGTCGTCGCTGTTCTTCTCATTGTCATCCTTCAAGTTCCCACAGCCATGCCCGCCAGACACCTCCCGCCTCATAATAGTCCAAA
GCGAGTGAGGGGCGAGACGGTGGAAGTTGCAGGGTCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCGCGCCATGCAGGCTTGTGATGGTTAGATACTTTTGTT
CTTCGGTTGAAGACTCGGAGACTTGTCCCTTGGCTTACAAGTGCATGTGCAGCCACAAGTCCTTCCCTGTTCCTTGA
Protein sequenceShow/hide protein sequence
MTPTKASILVVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVRYFCSSVEDSETCPLAYKCMCSHKSFPVP