; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13609 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13609
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor GTE4-like
Genome locationCarg_Chr02:416427..416687
RNA-Seq ExpressionCarg13609
SyntenyCarg13609
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604763.1 hypothetical protein SDJN03_02080, partial [Cucurbita argyrosperma subsp. sororia]2.2e-38100Show/hide
Query:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG
        MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG
Subjt:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG

KAG7034891.1 hypothetical protein SDJN02_01684, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-38100Show/hide
Query:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG
        MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG
Subjt:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG

XP_022970879.1 transcription factor GTE4-like isoform X1 [Cucurbita maxima]1.6e-2873.15Show/hide
Query:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGV----------------------KNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAAS
        MASAPIA GGNEDRIKQHSESKVYRRKTFRGV                      KNGNTITASFSNVE FNNSSGQAVPHSEALE+ANL   QPLPNAAS
Subjt:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGV----------------------KNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAAS

Query:  DDLTRLDG
        DDLTRL+G
Subjt:  DDLTRLDG

XP_022970887.1 transcription factor GTE4-like isoform X2 [Cucurbita maxima]1.6e-2873.15Show/hide
Query:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGV----------------------KNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAAS
        MASAPIA GGNEDRIKQHSESKVYRRKTFRGV                      KNGNTITASFSNVE FNNSSGQAVPHSEALE+ANL   QPLPNAAS
Subjt:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGV----------------------KNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAAS

Query:  DDLTRLDG
        DDLTRL+G
Subjt:  DDLTRLDG

XP_022970888.1 transcription factor GTE4-like isoform X3 [Cucurbita maxima]2.4e-3291.86Show/hide
Query:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG
        MASAPIA GGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVE FNNSSGQAVPHSEALE+ANL   QPLPNAASDDLTRL+G
Subjt:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG

TrEMBL top hitse value%identityAlignment
A0A6J1FUU8 transcription factor GTE4-like1.2e-2160.53Show/hide
Query:  MASAPIAGGGNEDRIKQ-HSESKVYRRKTFRGVK-------------------------NGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLP
        MASAPIAGGG++ RIKQ +SE KVYRRKTF+GVK                         NG TI+ +FSNV+  NNSS QAVPHSEA E+ANLSQQ+PLP
Subjt:  MASAPIAGGGNEDRIKQ-HSESKVYRRKTFRGVK-------------------------NGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLP

Query:  NAAS--DDLTRLDG
        NAAS  DDLTRLDG
Subjt:  NAAS--DDLTRLDG

A0A6J1I0E7 transcription factor GTE4-like isoform X27.6e-2973.15Show/hide
Query:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGV----------------------KNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAAS
        MASAPIA GGNEDRIKQHSESKVYRRKTFRGV                      KNGNTITASFSNVE FNNSSGQAVPHSEALE+ANL   QPLPNAAS
Subjt:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGV----------------------KNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAAS

Query:  DDLTRLDG
        DDLTRL+G
Subjt:  DDLTRLDG

A0A6J1I580 transcription factor GTE4-like isoform X31.1e-3291.86Show/hide
Query:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG
        MASAPIA GGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVE FNNSSGQAVPHSEALE+ANL   QPLPNAASDDLTRL+G
Subjt:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG

A0A6J1I6Y0 transcription factor GTE4-like isoform X17.6e-2973.15Show/hide
Query:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGV----------------------KNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAAS
        MASAPIA GGNEDRIKQHSESKVYRRKTFRGV                      KNGNTITASFSNVE FNNSSGQAVPHSEALE+ANL   QPLPNAAS
Subjt:  MASAPIAGGGNEDRIKQHSESKVYRRKTFRGV----------------------KNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAAS

Query:  DDLTRLDG
        DDLTRL+G
Subjt:  DDLTRLDG

A0A6J1J9L8 transcription factor GTE4-like1.2e-2160.53Show/hide
Query:  MASAPIAGGGNEDRIKQ-HSESKVYRRKTFRGVK-------------------------NGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLP
        MASAPIAGGG+E RIKQ +SE KVYRRKTF+GVK                         NG TI+ +FSNV+  NN+S QAVPHSEA E+ANLSQQ+PLP
Subjt:  MASAPIAGGGNEDRIKQ-HSESKVYRRKTFRGVK-------------------------NGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLP

Query:  NAAS--DDLTRLDG
        NAAS  DDLTRLDG
Subjt:  NAAS--DDLTRLDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGCGCCTATAGCTGGAGGGGGAAATGAAGATAGAATTAAGCAGCATTCTGAGAGTAAGGTTTACAGAAGGAAAACGTTCAGAGGTGTGAAGAATGGGAATAC
CATTACCGCCTCGTTTAGCAATGTTGAAGGCTTCAATAACAGTTCAGGCCAGGCAGTGCCGCATTCAGAAGCATTGGAAAATGCGAATCTATCGCAGCAGCAGCCTTTAC
CAAATGCTGCCTCTGACGATTTGACGAGGCTTGATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAGCGCCTATAGCTGGAGGGGGAAATGAAGATAGAATTAAGCAGCATTCTGAGAGTAAGGTTTACAGAAGGAAAACGTTCAGAGGTGTGAAGAATGGGAATAC
CATTACCGCCTCGTTTAGCAATGTTGAAGGCTTCAATAACAGTTCAGGCCAGGCAGTGCCGCATTCAGAAGCATTGGAAAATGCGAATCTATCGCAGCAGCAGCCTTTAC
CAAATGCTGCCTCTGACGATTTGACGAGGCTTGATGGATAG
Protein sequenceShow/hide protein sequence
MASAPIAGGGNEDRIKQHSESKVYRRKTFRGVKNGNTITASFSNVEGFNNSSGQAVPHSEALENANLSQQQPLPNAASDDLTRLDG