; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13617 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13617
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSmall ubiquitin-related modifier
Genome locationCarg_Chr02:372528..375182
RNA-Seq ExpressionCarg13617
SyntenyCarg13617
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570548.1 Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4697.98Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

XP_004150752.1 small ubiquitin-related modifier 1 [Cucumis sativus]5.5e-4798.99Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

XP_008456407.1 PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo]1.6e-4697.98Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

XP_022947043.1 small ubiquitin-related modifier 1-like [Cucurbita moschata]5.2e-5399.07Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL
        MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL

Query:  WNTCSTAL
        WNTCST+L
Subjt:  WNTCSTAL

XP_022970791.1 small ubiquitin-related modifier 1-like [Cucurbita maxima]2.3e-53100Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL
        MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL

Query:  WNTCSTAL
        WNTCSTAL
Subjt:  WNTCSTAL

TrEMBL top hitse value%identityAlignment
A0A0A0KDV8 Small ubiquitin-related modifier2.7e-4798.99Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

A0A5A7UHK7 Small ubiquitin-related modifier7.8e-4797.98Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

A0A6J1FTW7 Small ubiquitin-related modifier7.8e-4797.98Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

A0A6J1G5I7 Small ubiquitin-related modifier2.5e-5399.07Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL
        MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL

Query:  WNTCSTAL
        WNTCST+L
Subjt:  WNTCSTAL

A0A6J1I1J4 Small ubiquitin-related modifier1.1e-53100Show/hide
Query:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL
        MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL
Subjt:  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTL

Query:  WNTCSTAL
        WNTCSTAL
Subjt:  WNTCSTAL

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt33.4e-2357.78Show/hide
Query:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG T
Subjt:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

P55852 Small ubiquitin-related modifier 11.5e-4291.4Show/hide
Query:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS
        +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Subjt:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS

P55857 Small ubiquitin-related modifier 17.5e-3989.01Show/hide
Query:  EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 37.8e-2055.06Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 22.8e-4196.59Show/hide
Query:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Subjt:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 11.0e-4391.4Show/hide
Query:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS
        +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Subjt:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS

AT5G55160.1 small ubiquitin-like modifier 22.0e-4296.59Show/hide
Query:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Subjt:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

AT5G55160.2 small ubiquitin-like modifier 21.2e-3984.16Show/hide
Query:  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG
        EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG
Subjt:  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG

Query:  G
        G
Subjt:  G

AT5G55170.1 small ubiquitin-like modifier 35.6e-2155.06Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein4.7e-2049.45Show/hide
Query:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWN
        DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP+EL +ED DEI+A   Q GG + ++
Subjt:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGTGTTGCAAACACGCAGCAGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGAAATGAGGTGTTCTTTAG
GATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCCGTGGATCTGAACTCCATTGCCTTCCTATTTGATGGTCGTCGTCTTCGTGCCG
AGCAAACTCCCGATGAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGGTCTACCCTTTGGAATACATGTTCTACTGCTCTGTAG
mRNA sequenceShow/hide mRNA sequence
TATTTTTGTTACTCCTTGTGACGAGGCGGAAATCAGAATATTTGAGCCCTAATTTCTGGTAAAATCGGCCAAGATTGAAGAATGTCGGGTGTTGCAAACACGCAGCAGGA
GGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGAAATGAGGTGTTCTTTAGGATTAAAAGGAGCACTCAGCTGAAGAAAC
TGATGAATGCTTACTGTGATCGACAATCCGTGGATCTGAACTCCATTGCCTTCCTATTTGATGGTCGTCGTCTTCGTGCCGAGCAAACTCCCGATGAGCTAGAGATGGAG
GATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGGTCTACCCTTTGGAATACATGTTCTACTGCTCTGTAGATTCGCAGAAGACTGCCCGAAGTAGTAACTTA
AAATGTGAACACTTTCGTTGACAAGGGAGAAGATCTAAGTTTAATCTTTTGTTTTGAGGTCTATATTATCTTCTCGGATCAATTGTTCTTTTTAAAGCTTTGGAGGTACA
TGGGTGTGTATTTTACTTGAACTTTGTACTTAGTTTAATGGTTAAAGCTCTTTTTGTTCTTCT
Protein sequenceShow/hide protein sequence
MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL