; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13620 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13620
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE3 ubiquitin-protein ligase COP1
Genome locationCarg_Chr02:356819..358696
RNA-Seq ExpressionCarg13620
SyntenyCarg13620
Gene Ontology termsGO:0009639 - response to red or far red light (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR042755 - E3 ubiquitin-protein ligase COP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570549.1 E3 ubiquitin-protein ligase COP1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4773.33Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GCDVSIKELDSLL+MLSEKKRKMEQEES+RNM ILTDFL+  RKQK++ELNE  ++L            ++ ++ SAVERHRMELY A DRYSMKL MAG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        DDMKA EPWSSL DKRNDGPT TSLNT GVVS+GN Q KKADSRSQVSTY
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

KAG6570549.1 E3 ubiquitin-protein ligase COP1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2474.68Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIK
        + ++ V   VN +YIACGSETNE+FVYHKEISR LT H+FGSPDA DVEDD GS FISAVCW+S+SPTIL+ANSQGTIK
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIK

KAG6570549.1 E3 ubiquitin-protein ligase COP1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4773.33Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GCDVSIKELDSLL+MLSEKKRKMEQEES+RNM ILTDFL+  RKQK++ELNE  ++L            ++ ++ SAVERHRMELY A DRYSMKL MAG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        DDMKA EPWSSL DKRNDGPT TSLNT GVVS+GN Q KKADSRSQVSTY
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

KAG6604751.1 E3 ubiquitin-protein ligase COP1, partial [Cucurbita argyrosperma subsp. sororia]3.2e-6599.22Show/hide
Query:  MKLWMAGDDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDA
        MKLWMAGDDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDA
Subjt:  MKLWMAGDDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDA

Query:  GSNFISAVCWESDSPTILSANSQGTIKVL
        GSNFISAVCWESDSPTILSANSQGTIKV+
Subjt:  GSNFISAVCWESDSPTILSANSQGTIKVL

KAG7034880.1 E3 ubiquitin-protein ligase COP1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-120100Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISA
        DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISA
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISA

Query:  VCWESDSPTILSANSQGTIKVLVLAV
        VCWESDSPTILSANSQGTIKVLVLAV
Subjt:  VCWESDSPTILSANSQGTIKVLVLAV

XP_022149595.1 E3 ubiquitin-protein ligase COP1 [Momordica charantia]1.8e-4731.71Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFL+C RKQK+NELNE  ++L            L+ ++ SAVERHRMEL+ A DRYSMK+ MAG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY--------------------------------------------------
        DDM A +PWSSL DKR+DGPT TSLNT GVVS+GN Q KKADSRSQVS+Y                                                  
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -------------------------------------------------------------------------------VNSQYIACGSETNEVFVYHKE
                                                                                       VNS+YI+CGSETNEVFVYHKE
Subjt:  -------------------------------------------------------------------------------VNSQYIACGSETNEVFVYHKE

Query:  ISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV
        ISR LT H+FGSPDAGDVED+ GS FISAVCW+SDSPTIL+ANSQGTIKVLVLAV
Subjt:  ISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV

XP_022985929.1 E3 ubiquitin-protein ligase COP1 [Cucurbita maxima]7.8e-2776.47Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV
        + ++ V   VN +YIACGSETNE+FVYHKEISR LT H+FGSPDA DVEDD GS FISAVCW+S+SPTIL+ANSQGTIKVLVLAV
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV

TrEMBL top hitse value%identityAlignment
A0A0A0KBG5 Uncharacterized protein2.2e-2777.65Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV
        + ++ V   VN++YIACGSETNEVFVYHKEISR LT H+FGSPD  DVEDD GS FISAVCW+SDSPTIL+ANSQGTIKVLVLAV
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV

A0A0A0KBG5 Uncharacterized protein8.1e-4672.67Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFL+C RKQK++ELNE  ++L               E  S VERHRMEL  A DRYSMKL  AG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        DDMKA EPW +LMDKRNDGPT TSLNT GVVS+GN Q KKADSRSQVSTY
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

A0A5D3CT10 E3 ubiquitin-protein ligase COP11.3e-2777.65Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV
        + ++ V   VN++YIACGSETNEVFVYHKEISR LT H+FGSPD  DVEDD GS FISAVCW+SDSPTIL+ANSQGTIKVLVLAV
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV

A0A6J1D659 E3 ubiquitin-protein ligase COP18.7e-4831.71Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFL+C RKQK+NELNE  ++L            L+ ++ SAVERHRMEL+ A DRYSMK+ MAG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY--------------------------------------------------
        DDM A +PWSSL DKR+DGPT TSLNT GVVS+GN Q KKADSRSQVS+Y                                                  
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------VNSQYIACGSETNEVFVYHKE
                                                                                       VNS+YI+CGSETNEVFVYHKE
Subjt:  -------------------------------------------------------------------------------VNSQYIACGSETNEVFVYHKE

Query:  ISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV
        ISR LT H+FGSPDAGDVED+ GS FISAVCW+SDSPTIL+ANSQGTIKVLVLAV
Subjt:  ISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV

A0A6J1FV28 E3 ubiquitin-protein ligase COP12.9e-2776.47Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV
        + ++ V   VN +YIACGSETNE+FVYHKEISR LT H+FGSPDA DVEDD GS FISAVCW+S+SPTIL+ANSQGTIKVLVLAV
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV

A0A6J1FV28 E3 ubiquitin-protein ligase COP16.2e-4673.33Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFL+C RKQK++ELNE   +L               E  SAVERHRMEL  A DRYSMKL  AG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        DDMKA EPW +LMDKRNDGPT TSLNT GVVS+GN Q KKADSRSQVSTY
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

A0A6J1JEN8 E3 ubiquitin-protein ligase COP11.1e-4773.33Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GCDVSIKELDSLL+MLSEKKRKMEQEES+RNM ILTDFL+  RKQK++ELNE  ++L            ++ ++ SAVERHRMELY A DRYSMKL MAG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        DDMKA EPWSSL DKRNDGPT TSLNT GVVS+GN Q KKADSRSQVSTY
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

A0A6J1JEN8 E3 ubiquitin-protein ligase COP13.8e-2776.47Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV
        + ++ V   VN +YIACGSETNE+FVYHKEISR LT H+FGSPDA DVEDD GS FISAVCW+S+SPTIL+ANSQGTIKVLVLAV
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLAV

A0A6J1JEN8 E3 ubiquitin-protein ligase COP11.1e-4773.33Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GCDVSIKELDSLL+MLSEKKRKMEQEES+RNM ILTDFL+  RKQK++ELNE  ++L            ++ ++ SAVERHRMELY A DRYSMKL MAG
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        DDMKA EPWSSL DKRNDGPT TSLNT GVVS+GN Q KKADSRSQVSTY
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

SwissProt top hitse value%identityAlignment
P43254 E3 ubiquitin-protein ligase COP13.3e-2871.43Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLA
        + ++ V   VNS+Y+ACGSETNEV+VYHKEI+R +TSH+FGSPD  D E++AGS FISAVCW+SDSPT+L+ANSQGTIKVLVLA
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLA

P43254 E3 ubiquitin-protein ligase COP16.2e-2749.01Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNL-YLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMA
        GCDVSIKE+D+LL +L+E+KRKMEQEE+ERNM+IL DFL+C RKQK++ELNE  ++L Y+             E  +AVERHR++LY A DRYS+KL M 
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNL-YLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMA

Query:  GDDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        GDD      W    +K   G    SL+  G    GN Q KK + ++Q S++
Subjt:  GDDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

P93471 E3 ubiquitin-protein ligase COP11.1e-2671.76Show/hide
Query:  ADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLA
        A+ ++ V   V S+YIACGSETNEVFVYHKEIS+ LT H+FG+ D  D ED+AGS FISAVCW+SD PTIL+ANSQGTIKVLVLA
Subjt:  ADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLA

P93471 E3 ubiquitin-protein ligase COP13.1e-2649.33Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG
        GC+V++KELD+LL +L+EKKRKMEQEE+ERNM+IL DFL+C RKQK++EL E  ++L               E   AVE+HRM+LY A DRYS+KL M  
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAG

Query:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        DD    +   S MD  + G   + LN  G +SSG S  KK D +SQ+S++
Subjt:  DDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

Q94BM7 Protein SPA1-RELATED 45.6e-1249.35Show/hide
Query:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPD-AGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL
        V   V+  YIA GSETNEVFVYHK     + S++F + D   ++E D  S FIS+VCW   S T+++ANS G IK+L
Subjt:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPD-AGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL

Q9LJR3 Protein SPA1-RELATED 34.3e-1248.05Show/hide
Query:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDA-GDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL
        V   V+  YIA GSETNEVFVYHK     + S+ F + D+   +E D  S FIS++CW   S T+++ANS G IK+L
Subjt:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDA-GDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL

Q9T014 Protein SPA1-RELATED 29.6e-1242.35Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGS--PDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVL
        + ++ V    +  YIACGSETNEV+ YH+ +   +TS++FGS  P +G   ++  + F+S+VCW   S  ++SA+S G+IKVL L
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGS--PDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVL

Arabidopsis top hitse value%identityAlignment
AT1G53090.1 SPA1-related 44.0e-1349.35Show/hide
Query:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPD-AGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL
        V   V+  YIA GSETNEVFVYHK     + S++F + D   ++E D  S FIS+VCW   S T+++ANS G IK+L
Subjt:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPD-AGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL

AT1G53090.2 SPA1-related 44.0e-1349.35Show/hide
Query:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPD-AGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL
        V   V+  YIA GSETNEVFVYHK     + S++F + D   ++E D  S FIS+VCW   S T+++ANS G IK+L
Subjt:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPD-AGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL

AT2G32950.1 Transducin/WD40 repeat-like superfamily protein2.3e-2971.43Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLA
        + ++ V   VNS+Y+ACGSETNEV+VYHKEI+R +TSH+FGSPD  D E++AGS FISAVCW+SDSPT+L+ANSQGTIKVLVLA
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVLA

AT2G32950.1 Transducin/WD40 repeat-like superfamily protein4.4e-2849.01Show/hide
Query:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNL-YLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMA
        GCDVSIKE+D+LL +L+E+KRKMEQEE+ERNM+IL DFL+C RKQK++ELNE  ++L Y+             E  +AVERHR++LY A DRYS+KL M 
Subjt:  GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNL-YLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMA

Query:  GDDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY
        GDD      W    +K   G    SL+  G    GN Q KK + ++Q S++
Subjt:  GDDMKAIEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTY

AT3G15354.1 SPA1-related 33.1e-1348.05Show/hide
Query:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDA-GDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL
        V   V+  YIA GSETNEVFVYHK     + S+ F + D+   +E D  S FIS++CW   S T+++ANS G IK+L
Subjt:  VSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDA-GDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVL

AT4G11110.1 SPA1-related 26.8e-1342.35Show/hide
Query:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGS--PDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVL
        + ++ V    +  YIACGSETNEV+ YH+ +   +TS++FGS  P +G   ++  + F+S+VCW   S  ++SA+S G+IKVL L
Subjt:  DSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGS--PDAGDVEDDAGSNFISAVCWESDSPTILSANSQGTIKVLVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCTGTGATGTGTCAATTAAGGAGCTGGACTCCCTCTTGGCAATGCTTTCTGAGAAGAAGAGAAAGATGGAACAAGAAGAATCTGAGAGAAATATGAAAATCTTA
ACTGACTTCTTATATTGCCCAAGGAAGCAAAAAATTAACGAGCTCAATGAGACCTCCAGTAATCTATACTTGCATGTGAGGTGCAAACTGATCTTCAGTTTGTTA
AGGATGGAACTGTATAGTGCAGTGGAGAGACATAGGATGGAACTGTATAGTGCAAGCGACAGGTATTCCATGAAGCTATGGATGGCTGGAGATGATATGAAAGCT
ATAGAACCTTGGTCATCATTAATGGATAAGAGAAATGATGGGCCTACCTTTACATCTCTGAACACCGGGGGTGTTGTGTCCTCTGGGAATTCTCAAATTAAGAAA
GCAGATTCAAGGAGTCAAGTCAGCACTTATGTAAATAGCCAATACATTGCTTGCGGCAGTGAAACAAACGAAGTCTTCGTCTACCACAAGGAAATCTCCAGACAG
CTGACTTCGCATCAATTTGGTTCACCTGATGCAGGTGATGTGGAGGATGATGCGGGATCTAATTTCATCAGTGCTGTTTGCTGGGAGAGTGATAGTCCTACTATC
CTCAGTGCCAACAGCCAGGGAACAATTAAGGTGCTGGTTCTTGCGGTTTAA
mRNA sequenceShow/hide mRNA sequence
GGCTGTGATGTGTCAATTAAGGAGCTGGACTCCCTCTTGGCAATGCTTTCTGAGAAGAAGAGAAAGATGGAACAAGAAGAATCTGAGAGAAATATGAAAATCTTA
ACTGACTTCTTATATTGCCCAAGGAAGCAAAAAATTAACGAGCTCAATGAGACCTCCAGTAATCTATACTTGCATGTGAGGTGCAAACTGATCTTCAGTTTGTTA
AGGATGGAACTGTATAGTGCAGTGGAGAGACATAGGATGGAACTGTATAGTGCAAGCGACAGGTATTCCATGAAGCTATGGATGGCTGGAGATGATATGAAAGCT
ATAGAACCTTGGTCATCATTAATGGATAAGAGAAATGATGGGCCTACCTTTACATCTCTGAACACCGGGGGTGTTGTGTCCTCTGGGAATTCTCAAATTAAGAAA
GCAGATTCAAGGAGTCAAGTCAGCACTTATGTAAATAGCCAATACATTGCTTGCGGCAGTGAAACAAACGAAGTCTTCGTCTACCACAAGGAAATCTCCAGACAG
CTGACTTCGCATCAATTTGGTTCACCTGATGCAGGTGATGTGGAGGATGATGCGGGATCTAATTTCATCAGTGCTGTTTGCTGGGAGAGTGATAGTCCTACTATC
CTCAGTGCCAACAGCCAGGGAACAATTAAGGTGCTGGTTCTTGCGGTTTAATTAGTAATTTAACCATTTTAGAATAGAAATTATGTAGGGATGCGTCTTTAGCTC
AAATATATGTAAGTAATGCTCACGATTGTGCATGTGGTAGGGAAATACAACACAGATGGGTCTTTTTTAGTTAAGGTTACGTGTACCCATCAGGGGGGTATTTTA
TACCTAGCTCTTGGTGATCATATA
Protein sequenceShow/hide protein sequence
GCDVSIKELDSLLAMLSEKKRKMEQEESERNMKILTDFLYCPRKQKINELNETSSNLYLHVRCKLIFSLLRMELYSAVERHRMELYSASDRYSMKLWMAGDDMKA
IEPWSSLMDKRNDGPTFTSLNTGGVVSSGNSQIKKADSRSQVSTYVNSQYIACGSETNEVFVYHKEISRQLTSHQFGSPDAGDVEDDAGSNFISAVCWESDSPTI
LSANSQGTIKVLVLAV