; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13621 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13621
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger CCCH domain-containing protein 3-like
Genome locationCarg_Chr02:349730..351757
RNA-Seq ExpressionCarg13621
SyntenyCarg13621
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034879.1 Zinc finger CCCH domain-containing protein 3 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-148100Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVSTRLNEQGLA
        PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVSTRLNEQGLA
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVSTRLNEQGLA

XP_022149754.1 zinc finger CCCH domain-containing protein 3 [Momordica charantia]2.1e-13795.8Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQRNAVPNQSPD+SEALWRLEI DNQDGGDA ESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSC YYLRTGSCKFGVSCKFNHPQP+ VGNMLPQARPGALGSAGTPFMPSSGLPY+ GIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PRVQYMPGPCVQGQQSYVPVLVSP QGAIAAQDWNTY+
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

XP_022947607.1 zinc finger CCCH domain-containing protein 3-like [Cucurbita moschata]1.6e-142100Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

XP_022970766.1 zinc finger CCCH domain-containing protein 3-like [Cucurbita maxima]3.6e-14299.58Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PR+QYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

XP_038901479.1 zinc finger CCCH domain-containing protein 3-like [Benincasa hispida]9.2e-13896.22Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQRNA PNQSPD+SEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSC YYLRTGSCKFGVSCKFNHPQP+PVG MLPQARPGALGSAGTPFMPSSG+PY  GIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PRVQYMPGPCVQGQQSYVPVLVSP QGAIAAQDWNTYV
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

TrEMBL top hitse value%identityAlignment
A0A1S3C3U6 zinc finger CCCH domain-containing protein 3-like1.1e-13694.96Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQR+ VPNQSPD+SEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYV QGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSC YYLRTGSCKFGVSCKFNHPQP+PVGN LPQARPGALGS GTPFMPSSG+PY  GIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PRVQYMPGPCVQGQQSYVPVLVSP QGAIAAQDWNTYV
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

A0A5A7ULR5 Zinc finger CCCH domain-containing protein 3-like1.1e-13694.96Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQR+ VPNQSPD+SEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYV QGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSC YYLRTGSCKFGVSCKFNHPQP+PVGN LPQARPGALGS GTPFMPSSG+PY  GIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PRVQYMPGPCVQGQQSYVPVLVSP QGAIAAQDWNTYV
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

A0A6J1D7Z1 zinc finger CCCH domain-containing protein 39.9e-13895.8Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQRNAVPNQSPD+SEALWRLEI DNQDGGDA ESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSC YYLRTGSCKFGVSCKFNHPQP+ VGNMLPQARPGALGSAGTPFMPSSGLPY+ GIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PRVQYMPGPCVQGQQSYVPVLVSP QGAIAAQDWNTY+
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

A0A6J1G6X5 zinc finger CCCH domain-containing protein 3-like7.9e-143100Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

A0A6J1I1H3 zinc finger CCCH domain-containing protein 3-like1.8e-14299.58Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
        MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKT

Query:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
        GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL
Subjt:  GTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSL

Query:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
        PR+QYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV
Subjt:  PRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYV

SwissProt top hitse value%identityAlignment
O48772 Zinc finger CCCH domain-containing protein 267.2e-6150.42Show/hide
Query:  QVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV-YVAQGAL-YNGELPERIGQPDCEYFLKTGTC
        QVQ +    +SPD  E  +R  +  N+D  +  +SSPYPDRPGE DC +++RTG C YG++CR+NHP+  + QG + Y  +LPER+GQPDCE    TG C
Subjt:  QVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV-YVAQGAL-YNGELPERIGQPDCEYFLKTGTC

Query:  KYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRV
        KYG +CKYHHP+DR GAGPV FN+LGLPMRQ EK C YY++TG C+FGV+CKF+HP P        Q   G    A + F PS G PYASG+   SLP  
Subjt:  KYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRV

Query:  QY--MPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST
         Y  +P P V   Q+Y+P +V+P QG +  Q W TY+ ++
Subjt:  QY--MPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST

Q5JLB5 Zinc finger CCCH domain-containing protein 123.9e-5444.05Show/hide
Query:  EALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV---YVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDR
        E +W+        G  A +  PYP+R GEPDC YY+RTG C +G +CRFNHP         A   GE PER+GQP+C+Y+LKTGTCK+G +CK+HHPR++
Subjt:  EALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV---YVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDR

Query:  RG-AGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPS------SGLPYASGIPAWSLPRVQYMPGPC
         G AG V  N LG P+R  EK C+YYL+TG CK+G +CKF+HP+   + N +  +R       G+P  PS      +G PY   + +W+ PR  ++P P 
Subjt:  RG-AGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPS------SGLPYASGIPAWSLPRVQYMPGPC

Query:  VQGQQSYVPVLVSPPQGAIAAQDWNTY
         Q   +Y P++V  PQG +    WN+Y
Subjt:  VQGQQSYVPVLVSPPQGAIAAQDWNTY

Q8GXX7 Zinc finger CCCH domain-containing protein 332.5e-5345.25Show/hide
Query:  EALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHP---VYVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDR
        +A+W++ +S +    +  E+  YP+RPGEPDC YY+RTG C +GS CRFNHP     V   A   GE PERIGQP+CEY+LKTGTCK+G +CK+HHPR++
Subjt:  EALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHP---VYVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDR

Query:  RG-AGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRVQYMPGPCVQGQQS
         G AG V+ N+LG P+R  E  C+Y+LRTG CKFG +CKFNHPQP P   M+P                       SG  ++   R  ++  P  Q   S
Subjt:  RG-AGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRVQYMPGPCVQGQQS

Query:  YVPVLVSPPQGAIAAQDWNTY
        Y  +++  PQG +  Q WN Y
Subjt:  YVPVLVSPPQGAIAAQDWNTY

Q94AD9 Zinc finger CCCH domain-containing protein 33.5e-6351.65Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQG-ALYNGELPERIGQPDCEYFLK
        M D   VQ + V  +S D  E  +R ++  N+ G    E +PYPDRPGE DC +Y+RTG C YGS+CR+NHP ++ Q  A Y  ELPERIGQPDCEYFLK
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQG-ALYNGELPERIGQPDCEYFLK

Query:  TGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWS
        TG CKYG +CKYHHP+DR GA PV FN++GLPMR  EK C YYLRTG+C+FGV+CKF+HPQP            G   + G    P++ L YASG+   S
Subjt:  TGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWS

Query:  LPRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST
             Y   P  Q  QSYVP+LVSP QG +  Q W  Y+ ++
Subjt:  LPRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST

Q9SWF9 Zinc finger CCCH domain-containing protein ZFN-like1.6e-5548Show/hide
Query:  EALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHP---VYVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDR
        EA+W++    N    +  ES PYP+ PGEPDC YY+RTG C +G+ CRFNHP         A   GE PER+GQP+C+Y+LKTGTCK+G +C++HHP+D+
Subjt:  EALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHP---VYVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDR

Query:  RG-AGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLP----YASGIPAWSLPRVQYMPGPCVQ
         G AG V  NILG P+R  E   +YYLRTG CKFG +CKF+HPQP+   NM+   R    GS   P + S   P    YA+GI  WS     Y+P P  Q
Subjt:  RG-AGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLP----YASGIPAWSLPRVQYMPGPCVQ

Query:  GQQSYVPVLVSPPQGAIAAQDWNTY
        G  SY P+++  PQG ++   W+TY
Subjt:  GQQSYVPVLVSPPQGAIAAQDWNTY

Arabidopsis top hitse value%identityAlignment
AT1G04990.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.5e-6451.65Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQG-ALYNGELPERIGQPDCEYFLK
        M D   VQ + V  +S D  E  +R ++  N+ G    E +PYPDRPGE DC +Y+RTG C YGS+CR+NHP ++ Q  A Y  ELPERIGQPDCEYFLK
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQG-ALYNGELPERIGQPDCEYFLK

Query:  TGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWS
        TG CKYG +CKYHHP+DR GA PV FN++GLPMR  EK C YYLRTG+C+FGV+CKF+HPQP            G   + G    P++ L YASG+   S
Subjt:  TGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWS

Query:  LPRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST
             Y   P  Q  QSYVP+LVSP QG +  Q W  Y+ ++
Subjt:  LPRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST

AT1G04990.2 Zinc finger C-x8-C-x5-C-x3-H type family protein2.5e-6451.65Show/hide
Query:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQG-ALYNGELPERIGQPDCEYFLK
        M D   VQ + V  +S D  E  +R ++  N+ G    E +PYPDRPGE DC +Y+RTG C YGS+CR+NHP ++ Q  A Y  ELPERIGQPDCEYFLK
Subjt:  MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQG-ALYNGELPERIGQPDCEYFLK

Query:  TGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWS
        TG CKYG +CKYHHP+DR GA PV FN++GLPMR  EK C YYLRTG+C+FGV+CKF+HPQP            G   + G    P++ L YASG+   S
Subjt:  TGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWS

Query:  LPRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST
             Y   P  Q  QSYVP+LVSP QG +  Q W  Y+ ++
Subjt:  LPRVQYMPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST

AT2G32930.1 zinc finger nuclease 25.2e-6250.42Show/hide
Query:  QVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV-YVAQGAL-YNGELPERIGQPDCEYFLKTGTC
        QVQ +    +SPD  E  +R  +  N+D  +  +SSPYPDRPGE DC +++RTG C YG++CR+NHP+  + QG + Y  +LPER+GQPDCE    TG C
Subjt:  QVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV-YVAQGAL-YNGELPERIGQPDCEYFLKTGTC

Query:  KYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRV
        KYG +CKYHHP+DR GAGPV FN+LGLPMRQ EK C YY++TG C+FGV+CKF+HP P        Q   G    A + F PS G PYASG+   SLP  
Subjt:  KYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRV

Query:  QY--MPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST
         Y  +P P V   Q+Y+P +V+P QG +  Q W TY+ ++
Subjt:  QY--MPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST

AT2G32930.2 zinc finger nuclease 25.2e-6250.42Show/hide
Query:  QVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV-YVAQGAL-YNGELPERIGQPDCEYFLKTGTC
        QVQ +    +SPD  E  +R  +  N+D  +  +SSPYPDRPGE DC +++RTG C YG++CR+NHP+  + QG + Y  +LPER+GQPDCE    TG C
Subjt:  QVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV-YVAQGAL-YNGELPERIGQPDCEYFLKTGTC

Query:  KYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRV
        KYG +CKYHHP+DR GAGPV FN+LGLPMRQ EK C YY++TG C+FGV+CKF+HP P        Q   G    A + F PS G PYASG+   SLP  
Subjt:  KYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRV

Query:  QY--MPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST
         Y  +P P V   Q+Y+P +V+P QG +  Q W TY+ ++
Subjt:  QY--MPGPCVQGQQSYVPVLVSPPQGAIAAQDWNTYVVST

AT3G02830.1 zinc finger protein 11.8e-5445.25Show/hide
Query:  EALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHP---VYVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDR
        +A+W++ +S +    +  E+  YP+RPGEPDC YY+RTG C +GS CRFNHP     V   A   GE PERIGQP+CEY+LKTGTCK+G +CK+HHPR++
Subjt:  EALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHP---VYVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDR

Query:  RG-AGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRVQYMPGPCVQGQQS
         G AG V+ N+LG P+R  E  C+Y+LRTG CKFG +CKFNHPQP P   M+P                       SG  ++   R  ++  P  Q   S
Subjt:  RG-AGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRVQYMPGPCVQGQQS

Query:  YVPVLVSPPQGAIAAQDWNTY
        Y  +++  PQG +  Q WN Y
Subjt:  YVPVLVSPPQGAIAAQDWNTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGATAATCTGCAAGTTCAGAGGAATGCTGTTCCTAACCAATCCCCTGATGTCTCGGAGGCGCTCTGGCGGTTGGAAATTAGCGATAATCAAGATGGAGGCGACGC
GGCAGAATCAAGCCCTTACCCCGATCGTCCTGGCGAACCTGATTGCTTGTATTATATGAGAACTGGCTCTTGTAGCTATGGAAGTAATTGTCGCTTCAATCATCCTGTCT
ACGTTGCTCAGGGTGCTCTTTATAATGGGGAATTGCCAGAAAGAATTGGGCAACCCGACTGTGAGTATTTTCTGAAGACAGGGACCTGTAAATATGGAGGATCGTGTAAG
TATCATCATCCAAGAGATAGGCGTGGAGCTGGGCCTGTTACATTCAACATTTTAGGTCTTCCCATGCGACAGGAAGAAAAGTCGTGTTCTTATTATTTGCGCACGGGATC
ATGTAAATTTGGAGTTTCATGCAAGTTTAATCATCCCCAGCCAGCACCAGTTGGGAATATGTTACCTCAAGCTAGACCTGGTGCTTTGGGTTCTGCAGGCACTCCATTCA
TGCCTTCATCTGGTTTACCATATGCTAGTGGAATTCCTGCTTGGTCATTGCCTAGAGTGCAATATATGCCTGGTCCATGTGTACAAGGGCAACAATCTTATGTGCCTGTC
CTGGTTTCTCCACCACAGGGTGCCATAGCTGCTCAAGACTGGAACACTTATGTGGTAAGTACCCGTTTGAATGAACAAGGTTTAGCTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGGAATTTATCGAATTGGAATAATAGTGGATTTTACATTGATTCTTCACAATCTATCCGCGATTCCCTTCTCGCCTTGGTTCCTTATAAGATTTCTAAATTGGTTTC
TCTCTTCAATTTCCGACTGGGATCATCTTTTTCATAAGAGGAAGATCACACCATTTATTGAAGTTTTTTATTTGTGAAAGAGAATTTCTGAGCGATTTGGGGGCGTTTTT
GTTGTTTGTTATCTGAATTTTCCCGGGAGATTTGAGGAGCTTCTTCAGCTTTGATTGGTTGGATTTGAAAAGCATTTGAAGGGGTTTTCCTTTTTTAAATATCTACGACC
GATGCCAGATAATCTGCAAGTTCAGAGGAATGCTGTTCCTAACCAATCCCCTGATGTCTCGGAGGCGCTCTGGCGGTTGGAAATTAGCGATAATCAAGATGGAGGCGACG
CGGCAGAATCAAGCCCTTACCCCGATCGTCCTGGCGAACCTGATTGCTTGTATTATATGAGAACTGGCTCTTGTAGCTATGGAAGTAATTGTCGCTTCAATCATCCTGTC
TACGTTGCTCAGGGTGCTCTTTATAATGGGGAATTGCCAGAAAGAATTGGGCAACCCGACTGTGAGTATTTTCTGAAGACAGGGACCTGTAAATATGGAGGATCGTGTAA
GTATCATCATCCAAGAGATAGGCGTGGAGCTGGGCCTGTTACATTCAACATTTTAGGTCTTCCCATGCGACAGGAAGAAAAGTCGTGTTCTTATTATTTGCGCACGGGAT
CATGTAAATTTGGAGTTTCATGCAAGTTTAATCATCCCCAGCCAGCACCAGTTGGGAATATGTTACCTCAAGCTAGACCTGGTGCTTTGGGTTCTGCAGGCACTCCATTC
ATGCCTTCATCTGGTTTACCATATGCTAGTGGAATTCCTGCTTGGTCATTGCCTAGAGTGCAATATATGCCTGGTCCATGTGTACAAGGGCAACAATCTTATGTGCCTGT
CCTGGTTTCTCCACCACAGGGTGCCATAGCTGCTCAAGACTGGAACACTTATGTGGTAAGTACCCGTTTGAATGAACAAGGTTTAGCTTAA
Protein sequenceShow/hide protein sequence
MPDNLQVQRNAVPNQSPDVSEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCK
YHHPRDRRGAGPVTFNILGLPMRQEEKSCSYYLRTGSCKFGVSCKFNHPQPAPVGNMLPQARPGALGSAGTPFMPSSGLPYASGIPAWSLPRVQYMPGPCVQGQQSYVPV
LVSPPQGAIAAQDWNTYVVSTRLNEQGLA