| GenBank top hits | e value | %identity | Alignment |
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| KAG6604740.1 hypothetical protein SDJN03_02057, partial [Cucurbita argyrosperma subsp. sororia] | 5.9e-118 | 94.12 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFG AGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| KAG7034869.1 hypothetical protein SDJN02_01662 [Cucurbita argyrosperma subsp. argyrosperma] | 1.5e-129 | 100 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| XP_022948140.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucurbita moschata] | 1.6e-118 | 94.54 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFG AAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| XP_022948143.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucurbita moschata] | 5.9e-118 | 94.12 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFG AGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| XP_022970776.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucurbita maxima] | 5.9e-118 | 94.12 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRE+TNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFG AAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 1.4e-104 | 82.35 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MY VRK+PSLVDLCV KAIDN+RFLGDVGETD+HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T V ERM++K+VAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKM+DIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFGG +GYG NV NTKNK+LKK+KIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQK+ DIPSTKKPMF GR+SASTSK+T+THMA++W
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| A0A6J1G8K1 transcription elongation factor B polypeptide 3 isoform X2 | 2.9e-118 | 94.12 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFG AGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| A0A6J1G8W9 transcription elongation factor B polypeptide 3 isoform X1 | 7.6e-119 | 94.54 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFG AAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| A0A6J1I1I3 transcription elongation factor B polypeptide 3 isoform X1 | 2.9e-118 | 94.12 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRE+TNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFG AAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| A0A6J1I4W9 transcription elongation factor B polypeptide 3 isoform X2 | 1.1e-117 | 93.7 | Show/hide |
Query: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRE+TNIVSERMQKKKVAFRWIQL
Subjt: MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQL
Query: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFG AGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Subjt: YEAKMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWR
Query: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
Subjt: RNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 5.8e-47 | 45.13 | Show/hide |
Query: RKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LLE+IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G E+ + E ++ KV F+W LYE
Subjt: RKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKV-AFRWIQLYEA
Query: KMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWRRNA
K+ +++ E E R+K+ Y EN RKQSRQ ++CSK PP +KR F G A+GY N+ + K+ ++KK+KI++L+SQE+KN+ A +RN
Subjt: KMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWRRNA
Query: VQKTCDIPSTKKPMFSGRDSASTSKS
+QK+ I + KK S +S STS+S
Subjt: VQKTCDIPSTKKPMFSGRDSASTSKS
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| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 2.9e-46 | 44.25 | Show/hide |
Query: RKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LLE+IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G E+ + E ++ KV F+W LYE
Subjt: RKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNIVSERMQKKKV-AFRWIQLYEA
Query: KMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWRRNA
K+ +++ E E R+K+ Y EN RKQSRQ ++CSK PP +KR F G A+GY N+ + K+ ++KK+KI++L+SQE+KN+ A +RN
Subjt: KMKDIEKNESEAADRIKQSYLKENARKQSRQIQICSKVPPASNKRSFGGKIYRSLHLAWLLAAGYGSNVTNTKNKLLKKSKIEVLQSQEMKNIKAWRRNA
Query: VQKTCDIPSTKKPMFSGRDSASTSKS
+QK+ I + K+ S ++ STS+S
Subjt: VQKTCDIPSTKKPMFSGRDSASTSKS
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