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Carg13700 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13700
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSPARK domain-containing protein
Genome locationCarg_Chr03:5068658..5069032
RNA-Seq ExpressionCarg13700
SyntenyCarg13700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603773.1 hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia]7.7e-6199.19Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN
        MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEE+DRN
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN

Query:  IGQMVKLRQQRSWRPSLQSIPEII
        IGQMVKLRQQRSWRPSLQSIPEII
Subjt:  IGQMVKLRQQRSWRPSLQSIPEII

KAG7033944.1 hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-61100Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN
        MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN

Query:  IGQMVKLRQQRSWRPSLQSIPEII
        IGQMVKLRQQRSWRPSLQSIPEII
Subjt:  IGQMVKLRQQRSWRPSLQSIPEII

XP_008441100.1 PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo]1.2e-3469.05Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRH--GASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDD
        MGNCC+GQ STPV    +RR  P KN RQRRH  G+S C      SKE N+RE+KIRMTKKEL+ELVGWLNMADSSFE VMARLVNVI++QNGD++ +  
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRH--GASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDD

Query:  RNIGQMVKLRQQRSWRPSLQSIPEII
            Q+VKLRQQRSWRPSLQSIPEII
Subjt:  RNIGQMVKLRQQRSWRPSLQSIPEII

XP_022977330.1 uncharacterized protein LOC111477681 [Cucurbita maxima]5.2e-5792.74Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN
        MGNCCRGQSSTPVVSG +RRA PPKN+RQRRHGA SCSTTIKGSKEGN+RELKIRMTKKELKEL+GWLNMADSSFEQVMARLVNVIS+QNGDDSEEDD N
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN

Query:  IGQMVKLRQQRSWRPSLQSIPEII
        IGQMVKLRQQRSWRPSLQSIPEII
Subjt:  IGQMVKLRQQRSWRPSLQSIPEII

XP_023544016.1 uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo]1.4e-5794.35Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN
        MGNCCRGQSSTPVVSG +RRALPPKN+ QRRHGA+SCSTTIKGSKEGN+RELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISE NGDDSEEDDRN
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN

Query:  IGQMVKLRQQRSWRPSLQSIPEII
        IGQMVKLRQQRSWRPSLQSIPEII
Subjt:  IGQMVKLRQQRSWRPSLQSIPEII

TrEMBL top hitse value%identityAlignment
A0A0A0KHU7 Uncharacterized protein6.2e-3266.13Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN
        MGNCC+ QSSTPV+ G +    P KN  QRR+   S       SKE N+RE+KIRMTKKEL+ELVGWLNMADSSFEQVMARLVNVI+ QNGD++ +    
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN

Query:  IGQMVKLRQQRSWRPSLQSIPEII
          Q+VKLRQQRSWRPSLQSIPE+I
Subjt:  IGQMVKLRQQRSWRPSLQSIPEII

A0A1S3B2N5 uncharacterized protein LOC1034853266.0e-3569.05Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRH--GASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDD
        MGNCC+GQ STPV    +RR  P KN RQRRH  G+S C      SKE N+RE+KIRMTKKEL+ELVGWLNMADSSFE VMARLVNVI++QNGD++ +  
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRH--GASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDD

Query:  RNIGQMVKLRQQRSWRPSLQSIPEII
            Q+VKLRQQRSWRPSLQSIPEII
Subjt:  RNIGQMVKLRQQRSWRPSLQSIPEII

A0A5D3CNX5 Uncharacterized protein6.0e-3569.05Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRH--GASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDD
        MGNCC+GQ STPV    +RR  P KN RQRRH  G+S C      SKE N+RE+KIRMTKKEL+ELVGWLNMADSSFE VMARLVNVI++QNGD++ +  
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRH--GASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDD

Query:  RNIGQMVKLRQQRSWRPSLQSIPEII
            Q+VKLRQQRSWRPSLQSIPEII
Subjt:  RNIGQMVKLRQQRSWRPSLQSIPEII

A0A6J1EYG4 uncharacterized protein LOC1114400573.7e-0837.69Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCS-----TTIKGSKEGN---MRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGD
        MGNCCR QSST + +G +  +   K+ R R   AS+ S       + G K+ +     ++KI+MTK+EL++LV  L +   S EQV+ R++N   E  G+
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCS-----TTIKGSKEGN---MRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGD

Query:  DSEEDDRNIGQMVKLRQQRSWRPSLQSIPE
                          RSWRPSLQSIPE
Subjt:  DSEEDDRNIGQMVKLRQQRSWRPSLQSIPE

A0A6J1IM02 uncharacterized protein LOC1114776812.5e-5792.74Show/hide
Query:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN
        MGNCCRGQSSTPVVSG +RRA PPKN+RQRRHGA SCSTTIKGSKEGN+RELKIRMTKKELKEL+GWLNMADSSFEQVMARLVNVIS+QNGDDSEEDD N
Subjt:  MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRN

Query:  IGQMVKLRQQRSWRPSLQSIPEII
        IGQMVKLRQQRSWRPSLQSIPEII
Subjt:  IGQMVKLRQQRSWRPSLQSIPEII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.4.2e-0434.25Show/hide
Query:  ELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRNIGQMVKLRQQRSWRPSLQSIPEI
        E+KIR+TKK+L +L+  +N+ D +F+Q       +++ +  +++              QQR WRP LQSIPE+
Subjt:  ELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRNIGQMVKLRQQRSWRPSLQSIPEI

AT4G21920.1 unknown protein3.8e-0527.01Show/hide
Query:  MGNC-CRGQSSTPVVSGRNRRALPPKNVRQRRH-------------GASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVI
        MGNC C  + +T   SG +  +   +  R+R               G +S  T+   S     RE+KIR+TKKEL++L+  + +   + E+++++L+   
Subjt:  MGNC-CRGQSSTPVVSGRNRRALPPKNVRQRRH-------------GASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVI

Query:  SEQNGDDSEEDDRNIGQMVKLRQQRSWRPSLQSIPEI
         +Q G  + +              + W+P LQSIPE+
Subjt:  SEQNGDDSEEDDRNIGQMVKLRQQRSWRPSLQSIPEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCTGTGGTGTCGGGCCGCAATCGGAGGGCTCTGCCGCCGAAGAACGTCCGTCAGAGAAGGCATGGAGCTAGTTCTTG
TTCTACTACGATCAAGGGTTCAAAAGAGGGTAATATGAGAGAGTTGAAAATAAGGATGACGAAAAAGGAGCTAAAGGAATTGGTTGGATGGTTGAACATGGCGGACTCCA
GTTTTGAACAAGTTATGGCTCGTCTTGTGAACGTTATTAGCGAGCAAAATGGTGATGATAGTGAAGAAGATGATAGGAATATTGGGCAGATGGTGAAATTGCGTCAGCAA
CGTTCATGGAGGCCTTCTCTGCAGAGCATTCCTGAGATAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCTGTGGTGTCGGGCCGCAATCGGAGGGCTCTGCCGCCGAAGAACGTCCGTCAGAGAAGGCATGGAGCTAGTTCTTG
TTCTACTACGATCAAGGGTTCAAAAGAGGGTAATATGAGAGAGTTGAAAATAAGGATGACGAAAAAGGAGCTAAAGGAATTGGTTGGATGGTTGAACATGGCGGACTCCA
GTTTTGAACAAGTTATGGCTCGTCTTGTGAACGTTATTAGCGAGCAAAATGGTGATGATAGTGAAGAAGATGATAGGAATATTGGGCAGATGGTGAAATTGCGTCAGCAA
CGTTCATGGAGGCCTTCTCTGCAGAGCATTCCTGAGATAATCTGA
Protein sequenceShow/hide protein sequence
MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSCSTTIKGSKEGNMRELKIRMTKKELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRNIGQMVKLRQQ
RSWRPSLQSIPEII