CuGenDBv2

Gene ID	Carg13702
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Derlin
Genome location	Carg_Chr03:5063224..5064382
RNA-Seq Expression	Carg13702
Synteny	Carg13702
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0030968 - endoplasmic reticulum unfolded protein response (biological process) GO:0000839 - Hrd1p ubiquitin ligase ERAD-L complex (cellular component) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0051787 - misfolded protein binding (molecular function) GO:1990381 - ubiquitin-specific protease binding (molecular function)
InterPro domains	IPR007599 - Derlin IPR035952 - Rhomboid-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6603771.1 Derlin-2.2, partial [Cucurbita argyrosperma subsp. sororia]

6.7e-93

100

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

KAG7033942.1 Derlin-2.2, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-96

100

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Query:  MCLLLPDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFT
        MCLLLPDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFT
Subjt:  MCLLLPDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFT

Query:  AAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        AAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
Subjt:  AAYLPWVLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

XP_008439977.1 PREDICTED: derlin-2.2 [Cucumis melo]

3.7e-91

97.75

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLT IVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFI+ALFADEAVVVARP DLRFAAPA EDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

XP_022950204.1 derlin-2.2 [Cucurbita moschata]

6.7e-93

100

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

XP_038882799.1 derlin-2.2 [Benincasa hispida]

1.3e-91

98.31

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLT IVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFI+ALFADEAVVVARPVDLRFAAPA EDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHD5 Derlin

1.8e-91

97.75

Show/hide

Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLT IVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFI+ALFADEAVVVARP DLRFAAPA EDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

A0A1S3B028 Derlin

1.8e-91

97.75

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLT IVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFI+ALFADEAVVVARP DLRFAAPA EDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

A0A5D3CPU8 Derlin

1.8e-91

97.75

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLT IVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFI+ALFADEAVVVARP DLRFAAPA EDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

A0A6J1GF48 Derlin

3.2e-93

100

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

A0A6J1IN59 Derlin

3.2e-93

100

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

SwissProt top hits

e value

%identity

Alignment

Q4G2J3 Derlin-2.2

3.9e-80

85.38

Show/hide

Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLT IVL+GGMIPY+SE+ A ++FLSNSLTFMMVYVWSK NPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPA
        VLLGFS+LVG+S WVDLLGM+AGH YYFLEDVYPRMTGRRPLKTPSFI+ALFAD+ VVVA+P +    A A
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPA

Q4G2J4 Derlin-2.1

3.0e-80

85.38

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLT+IVL+GGMIPY+SE+ A ++FLSNSLTFMMVYVWSK NPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPA
        VLLGFS+LVG+S WVDLLGM+AGH YYFLEDVYPRMTGRRPLKTPSFI+ALFAD+ VVVA+P +    A A
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPA

Q851X7 Derlin-2

1.4e-80

85.96

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLT IVL+GGMIPY+SE+ A ++FLSNSLTFMMVYVWSK NPFIHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPA
        VLLGFS+LVG+S WVDLLGM+AGH YYFLEDVYPRMTGRRPLKTPSFI+ALFAD+ VVVARP +    A A
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPA

Q8VZ96 Derlin-2.1

1.2e-81

83.71

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRG+TADF YMLLFGATVLT IVL+GGMIPYLS S +++IFLSNSLTFMMVYVWSKQNP+IHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFS+LVGASAW D LGM+AGHAYYFL  VYPRMT RRPLKTPSF++ALFADE VV+ARP D+RFA    ++IHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

Q9ZS88 Derlin-2.2

3.4e-84

85.39

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDF+FHMFFLARYCKLLEENSFRG+TADF YMLLFGA+VLT IVL+GGMIPYLS S A++IFLSNSLTFMMVYVWSKQNP+IHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFS+LVGASAWVDLLGM+AGHAYYFL +VYPRMT RRPLKTPSF++ALFADE VVVARP D+RFAA   ++IHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

Arabidopsis top hits

e value

%identity

Alignment

AT4G04860.1 DERLIN-2.2

2.4e-85

85.39

Show/hide

Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDF+FHMFFLARYCKLLEENSFRG+TADF YMLLFGA+VLT IVL+GGMIPYLS S A++IFLSNSLTFMMVYVWSKQNP+IHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFS+LVGASAWVDLLGM+AGHAYYFL +VYPRMT RRPLKTPSF++ALFADE VVVARP D+RFAA   ++IHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

AT4G21810.1 DERLIN-2.1

8.7e-83

83.71

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Query:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW
        DLDFLFHMFFLARYCKLLEENSFRG+TADF YMLLFGATVLT IVL+GGMIPYLS S +++IFLSNSLTFMMVYVWSKQNP+IHMSFLGLFTFTAAYLPW
Subjt:  DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPW

Query:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD
        VLLGFS+LVGASAW D LGM+AGHAYYFL  VYPRMT RRPLKTPSF++ALFADE VV+ARP D+RFA    ++IHQD
Subjt:  VLLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

AT4G29330.1 DERLIN-1

2.4e-24

40.13

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Query:  LDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWV
        ++F   +  +ARY   LE+  F  RTADF +M++FG+  L    LV  +IP+         FL  SL FM++Y+WS++ P  ++S  GL T  A YLPW 
Subjt:  LDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWV

Query:  LLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFA
        +L   V+ G+    DLLG++AGH YYFL  ++P  TG+  LKTP ++  + A
Subjt:  LLGFSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTGTCTGTTATTGCCAGATTTGGATTTTTTGTTTCACATGTTTTTTCTTGCCCGATACTGCAAACTTCTGGAAGAAAACTCTTTTAGGGGAAGAACAGCTGATTTCTT
TTATATGCTCTTATTTGGGGCCACGGTGCTAACTGCAATTGTTTTGGTTGGGGGAATGATACCGTACTTGTCCGAGTCAATTGCTGAAGTTATATTCCTTAGCAACTCTC
TGACGTTCATGATGGTTTATGTGTGGAGCAAGCAAAATCCGTTCATTCATATGAGCTTTTTGGGCCTCTTTACTTTTACAGCAGCTTACCTGCCATGGGTTCTATTAGGG
TTCTCTGTACTTGTCGGGGCCAGTGCATGGGTAGATCTACTGGGTATGGTTGCTGGTCACGCTTATTATTTTCTTGAAGACGTGTACCCACGAATGACAGGCCGTCGACC
GTTGAAAACTCCATCCTTTATCAGGGCCTTATTTGCTGATGAAGCAGTTGTAGTGGCACGGCCCGTGGATTTGAGATTTGCAGCACCTGCTGTTGAGGATATTCATCAAG
ATTAG

mRNA sequence

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Protein sequence

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MCLLLPDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTAIVLVGGMIPYLSESIAEVIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLG
FSVLVGASAWVDLLGMVAGHAYYFLEDVYPRMTGRRPLKTPSFIRALFADEAVVVARPVDLRFAAPAVEDIHQD

Carg13702 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome