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Carg13706 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13706
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPatatin
Genome locationCarg_Chr03:5058929..5059246
RNA-Seq ExpressionCarg13706
SyntenyCarg13706
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594656.1 hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4382.41Show/hide
Query:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
        M  +APLAIGTRGT+GSLVMKEIEYFTK E+ERHG SQR+SGDASRRSD K SFWL+SL+WKWKKR+ NNGILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK

Query:  HD---FPI
        +D   FPI
Subjt:  HD---FPI

KAG6603769.1 hypothetical protein SDJN03_04378, partial [Cucurbita argyrosperma subsp. sororia]2.7e-54100Show/hide
Query:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
        MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
Subjt:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK

Query:  HDFPI
        HDFPI
Subjt:  HDFPI

XP_022977336.1 uncharacterized protein LOC111477686 [Cucurbita maxima]2.7e-54100Show/hide
Query:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
        MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
Subjt:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK

Query:  HDFPI
        HDFPI
Subjt:  HDFPI

XP_023544018.1 uncharacterized protein LOC111803725 [Cucurbita pepo subsp. pepo]2.7e-54100Show/hide
Query:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
        MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
Subjt:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK

Query:  HDFPI
        HDFPI
Subjt:  HDFPI

XP_038882225.1 uncharacterized protein LOC120073447 [Benincasa hispida]1.0e-4586.67Show/hide
Query:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
        M G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  ISGDA RRSD KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNGIPGF YRILK
Subjt:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK

Query:  HDFPI
         DFPI
Subjt:  HDFPI

TrEMBL top hitse value%identityAlignment
A0A0A0KL84 Uncharacterized protein3.9e-4384.31Show/hide
Query:  IAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDF
        +APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  ISG+A RRSD +GSFWL+SLTWKWKKRKGNNG+LPNI SAVE SKSNRFNGIPGF YRILK DF
Subjt:  IAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDF

Query:  PI
        PI
Subjt:  PI

A0A5D3CRM5 Uncharacterized protein1.9e-4284.31Show/hide
Query:  IAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDF
        +APLAIGTRGTVGSLVMKEIEYFT  E+ERHGSS  I G+A RRSD KGSFWL+SLTWKWKKRK NNGILPNI SAVE SKSNRFNGIPGF YRILK DF
Subjt:  IAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDF

Query:  PI
        PI
Subjt:  PI

A0A6J1EEE9 uncharacterized protein LOC1114335711.3e-4382.41Show/hide
Query:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
        M  +APLAIGTRGT+GSLVMKEIEYFTK E+ERHG SQR+SGDASRRSD K SFWL+SL+WKWKKR+ NNGILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK

Query:  HD---FPI
         D   FPI
Subjt:  HD---FPI

A0A6J1IJL8 uncharacterized protein LOC1114776861.3e-54100Show/hide
Query:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
        MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
Subjt:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK

Query:  HDFPI
        HDFPI
Subjt:  HDFPI

A0A6J1KQQ8 uncharacterized protein LOC1114974073.0e-4381.48Show/hide
Query:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK
        M  +APLAIGTRGT+GSLVMKEIEYFTK E+ERHG SQR+SGDASRRSD + SFWL+SL+WKWKKR+ NNGILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILK

Query:  HD---FPI
         D   FPI
Subjt:  HD---FPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein1.1e-1644.04Show/hide
Query:  APLAIGTRGTVGSLVMKEIEYFTKFEV------ERHGSSQRISGDASR--RSDCKGSFWLVSLTWKWKKRK---GNNGILPNICSAVELSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF  F         R G+S+       +  RS  +   W     W+ KKR+   G     P++CSAVE+S  NR   +PG
Subjt:  APLAIGTRGTVGSLVMKEIEYFTKFEV------ERHGSSQRISGDASR--RSDCKGSFWLVSLTWKWKKRK---GNNGILPNICSAVELSKSNRFNGIPG

Query:  FSYRILKHD
        F+YRILK D
Subjt:  FSYRILKHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTATTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCACCAAGTTTGAGGTGGAACGCCATGGCAGCTC
TCAGAGGATAAGTGGAGATGCTTCGAGGAGAAGCGATTGTAAGGGAAGCTTTTGGCTTGTGTCCTTGACTTGGAAGTGGAAGAAGAGAAAAGGCAATAATGGGATTCTCC
CCAACATTTGCAGTGCTGTTGAATTGTCAAAAAGCAATCGCTTCAATGGGATTCCTGGTTTCAGTTACAGGATTCTCAAACACGACTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTATTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCACCAAGTTTGAGGTGGAACGCCATGGCAGCTC
TCAGAGGATAAGTGGAGATGCTTCGAGGAGAAGCGATTGTAAGGGAAGCTTTTGGCTTGTGTCCTTGACTTGGAAGTGGAAGAAGAGAAAAGGCAATAATGGGATTCTCC
CCAACATTTGCAGTGCTGTTGAATTGTCAAAAAGCAATCGCTTCAATGGGATTCCTGGTTTCAGTTACAGGATTCTCAAACACGACTTTCCCATTTGA
Protein sequenceShow/hide protein sequence
MDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDFPI