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Carg13722 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13722
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF1218)
Genome locationCarg_Chr03:4986652..4987356
RNA-Seq ExpressionCarg13722
SyntenyCarg13722
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647674.1 hypothetical protein Csa_003691 [Cucumis sativus]6.1e-8386.52Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        M+K  G VVCIL+I++DVTAGILGIQAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGC+ VRSAQ+YKGL++NKQLA GSL+F
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIA+VVGFSLLISGAMYNTRSRKSCGLAHN LLSIGGI CFVHGLFAVAYYVS TAG RE+T+PPPQG+PAGATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

KAG6603752.1 hypothetical protein SDJN03_04361, partial [Cucurbita argyrosperma subsp. sororia]4.5e-86100Show/hide
Query:  MDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVFAWIAVVVGFSLLISG
        MDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVFAWIAVVVGFSLLISG
Subjt:  MDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVFAWIAVVVGFSLLISG

Query:  AMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
Subjt:  AMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

XP_004134744.2 uncharacterized protein LOC101214369 [Cucumis sativus]6.1e-8386.52Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        M+K  G VVCIL+I++DVTAGILGIQAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGC+ VRSAQ+YKGL++NKQLA GSL+F
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIA+VVGFSLLISGAMYNTRSRKSCGLAHN LLSIGGI CFVHGLFAVAYYVS TAG RE+T+PPPQG+PAGATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

XP_022950216.1 uncharacterized protein LOC111453374 [Cucurbita moschata]7.6e-94100Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

XP_022977369.1 uncharacterized protein LOC111477717 [Cucurbita maxima]4.6e-9197.19Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIA+VVGFSLLISGAMYNTRSRKSCGLAH+HLLSIGGI CFVHGLFAVAYYVSATAG+RE TRPPPQGHPAGATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

TrEMBL top hitse value%identityAlignment
A0A0A0KLA9 Uncharacterized protein2.9e-8386.52Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        M+K  G VVCIL+I++DVTAGILGIQAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGC+ VRSAQ+YKGL++NKQLA GSL+F
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIA+VVGFSLLISGAMYNTRSRKSCGLAHN LLSIGGI CFVHGLFAVAYYVS TAG RE+T+PPPQG+PAGATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

A0A1S3AZY5 uncharacterized protein LOC1034845785.0e-8385.96Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        M+K  G VVCIL+I++DVTAGILGIQAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGC++VRSAQ+YKGL++NKQLAAGSL+F
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIA++VGFSLLISGAMYNTRSRKSCGLAHN LLSIGGI CFVHGLFAVAYYVS TAG RE+T+PPPQG+PA ATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

A0A5D3CMA3 Uncharacterized protein5.0e-8385.96Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        M+K  G VVCIL+I++DVTAGILGIQAE+AQNKVNHFKMWIFECKDPSYNAFKLGLAAAILL LAHAIANLVGGC++VRSAQ+YKGL++NKQLAAGSL+F
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIA++VGFSLLISGAMYNTRSRKSCGLAHN LLSIGGI CFVHGLFAVAYYVS TAG RE+T+PPPQG+PA ATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

A0A6J1GE80 uncharacterized protein LOC1114533743.7e-94100Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

A0A6J1IR67 uncharacterized protein LOC1114777172.2e-9197.19Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV
        AWIA+VVGFSLLISGAMYNTRSRKSCGLAH+HLLSIGGI CFVHGLFAVAYYVSATAG+RE TRPPPQGHPAGATGHV
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05291.1 Protein of unknown function (DUF1218)9.2e-2137.58Show/hide
Query:  VVCILVIV-MDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNK---QLAAGSLVFAWI
        +VCI++ V +D+ AG +G+QA+ AQ  V H K+   ECK PS  AF LG+ A   L  AH  AN++ GC      Q    L  NK         L   W+
Subjt:  VVCILVIV-MDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNK---QLAAGSLVFAWI

Query:  AVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVS---ATAGNREETRP
          + G  +L +G   NT SR  C   +NH+ SIGG  CF+H + +  YY+S   A A +   T+P
Subjt:  AVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVS---ATAGNREETRP

AT1G11500.1 Protein of unknown function (DUF1218)2.3e-3242.6Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFE------C-KDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQL
        M+   GF+V +++I  D+TA +LGI+AE+AQ+K  H             C + PS  AF  G+AA +LL + H +AN++GGC Y+RS Q++K  T+NK L
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFE------C-KDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQL

Query:  AAGSLVFAWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREE
        A   LV +WI  VV +S L+ G + N+R+ + C L H     IGGI C  HG+   AYYVSA A  +E+
Subjt:  AAGSLVFAWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREE

AT2G32280.1 Protein of unknown function (DUF1218)2.0e-4752.8Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        M K  G +VC++++ +DV A ILGIQAEVAQN+V H ++W+FEC++PS +AF+LGL AA +L +AH + NLVGGC+ + S  E++  +S +Q++   LV 
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNRE
         WI   VGF  ++ G M N++SR SCG  H+H LSIGGI CF+H LF VAYYVSATA   E
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNRE

AT4G21310.1 Protein of unknown function (DUF1218)7.2e-5863.8Show/hide
Query:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF
        M +  GF +CIL++ MDV+AGILGI+AE+AQNKV H KMWIFEC+DPSY AFK GLAA ILL LAH  AN +GGC+ V S Q+ +  ++NKQLA  SL+F
Subjt:  MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVF

Query:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREET
         WI + + FS+LI G M N+RSRK+CG++H+ +LSIGGI CFVHGLFAVAYY+SATA  RE+T
Subjt:  AWIAVVVGFSLLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAGCTTCTGGTTTTGTTGTCTGCATCTTGGTTATTGTTATGGATGTTACAGCCGGAATTCTTGGAATTCAAGCTGAAGTAGCTCAAAACAAGGTGAACCATTT
CAAAATGTGGATATTTGAGTGTAAAGACCCAAGCTATAATGCTTTCAAGCTAGGCTTGGCTGCAGCCATACTGCTGGGCCTTGCTCACGCCATTGCCAACCTGGTTGGTG
GGTGCGTTTATGTTCGATCTGCTCAAGAATACAAAGGATTAACCTCTAACAAGCAACTTGCAGCGGGTTCACTCGTCTTTGCATGGATTGCAGTAGTGGTTGGATTCTCG
TTGCTCATCTCTGGGGCGATGTATAACACCAGGTCAAGAAAATCATGCGGGCTTGCTCACAATCATCTTCTGTCTATAGGCGGGATCGCGTGCTTCGTACACGGCTTGTT
TGCAGTTGCTTACTATGTTTCTGCCACAGCAGGAAACAGGGAGGAGACGAGGCCGCCACCACAGGGGCACCCTGCCGGAGCTACAGGCCACGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAGCTTCTGGTTTTGTTGTCTGCATCTTGGTTATTGTTATGGATGTTACAGCCGGAATTCTTGGAATTCAAGCTGAAGTAGCTCAAAACAAGGTGAACCATTT
CAAAATGTGGATATTTGAGTGTAAAGACCCAAGCTATAATGCTTTCAAGCTAGGCTTGGCTGCAGCCATACTGCTGGGCCTTGCTCACGCCATTGCCAACCTGGTTGGTG
GGTGCGTTTATGTTCGATCTGCTCAAGAATACAAAGGATTAACCTCTAACAAGCAACTTGCAGCGGGTTCACTCGTCTTTGCATGGATTGCAGTAGTGGTTGGATTCTCG
TTGCTCATCTCTGGGGCGATGTATAACACCAGGTCAAGAAAATCATGCGGGCTTGCTCACAATCATCTTCTGTCTATAGGCGGGATCGCGTGCTTCGTACACGGCTTGTT
TGCAGTTGCTTACTATGTTTCTGCCACAGCAGGAAACAGGGAGGAGACGAGGCCGCCACCACAGGGGCACCCTGCCGGAGCTACAGGCCACGTTTAG
Protein sequenceShow/hide protein sequence
MQKASGFVVCILVIVMDVTAGILGIQAEVAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLVGGCVYVRSAQEYKGLTSNKQLAAGSLVFAWIAVVVGFS
LLISGAMYNTRSRKSCGLAHNHLLSIGGIACFVHGLFAVAYYVSATAGNREETRPPPQGHPAGATGHV