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Carg13732 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13732
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein CONSTANS-LIKE 13-like
Genome locationCarg_Chr03:4953766..4954061
RNA-Seq ExpressionCarg13732
SyntenyCarg13732
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603735.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]4.8e-26100Show/hide
Query:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
        LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
Subjt:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
KAG7033913.1 hypothetical protein SDJN02_03638, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-30100Show/hide
Query:  MAPIFWLVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
        MAPIFWLVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
Subjt:  MAPIFWLVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
XP_022950367.1 putative zinc finger protein At1g68190 [Cucurbita moschata]1.1e-2598.51Show/hide
Query:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
        LVATVAFCQ+CVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
Subjt:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
XP_022977340.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima]4.0e-2597.01Show/hide
Query:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
        LVATVAFCQ+CVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKE+QVVPWLSLSSRS
Subjt:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
XP_023544021.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo]1.7e-2394.03Show/hide
Query:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
        LVATVAFCQ+CVEKNRR+GKTAQRR RRRVGEEEGRGSSNGG GGGSDSDDEKENQVVPWLSLSSRS
Subjt:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
TrEMBL top hitse value%identityAlignment
A0A0A0KHH6 B box-type domain-containing protein5.0e-0556.25Show/hide
Query:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLS
        LVATVAFC +CV KNRRN     RR  +  G  +G G++     G  D DDE ENQVVPWLSLS
Subjt:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLS
A0A6J1GEL4 putative zinc finger protein At1g681905.1e-2698.51Show/hide
Query:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
        LVATVAFCQ+CVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
Subjt:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
A0A6J1IM17 zinc finger protein CONSTANS-LIKE 13-like2.0e-2597.01Show/hide
Query:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
        LVATVAFCQ+CVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKE+QVVPWLSLSSRS
Subjt:  LVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCAATTTTCTGGCTTGTGGCCACGGTTGCGTTTTGTCAGAGCTGTGTCGAGAAAAACAGGCGAAACGGGAAGACGGCGCAGCGGAGAGGGAGAAGGCGAGTGGG
TGAAGAGGAAGGACGTGGGAGCTCTAATGGCGGCTCTGGCGGTGGCAGTGACAGTGACGATGAGAAGGAAAATCAAGTGGTTCCTTGGTTATCACTCTCCTCTCGCTCTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCAATTTTCTGGCTTGTGGCCACGGTTGCGTTTTGTCAGAGCTGTGTCGAGAAAAACAGGCGAAACGGGAAGACGGCGCAGCGGAGAGGGAGAAGGCGAGTGGG
TGAAGAGGAAGGACGTGGGAGCTCTAATGGCGGCTCTGGCGGTGGCAGTGACAGTGACGATGAGAAGGAAAATCAAGTGGTTCCTTGGTTATCACTCTCCTCTCGCTCTT
AG
Protein sequenceShow/hide protein sequence
MAPIFWLVATVAFCQSCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVVPWLSLSSRS