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Carg13754 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13754
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionctenidin-3-like
Genome locationCarg_Chr03:4846110..4847049
RNA-Seq ExpressionCarg13754
SyntenyCarg13754
Gene Ontology termsGO:0007218 - neuropeptide signaling pathway (biological process)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603713.1 hypothetical protein SDJN03_04322, partial [Cucurbita argyrosperma subsp. sororia]9.9e-6299.19Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKG YGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
Subjt:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCSKKCIGY
        GKGFGGGGGGGGCTIDCSKKCIGY
Subjt:  GKGFGGGGGGGGCTIDCSKKCIGY

KAG7033891.1 hypothetical protein SDJN02_03616, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-95100Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
Subjt:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCSKKCIGYYEYRTEKGTDPESTTSPARFVYAPVGIGVRTNSTFAEHIPPRANLDTKQVYP
        GKGFGGGGGGGGCTIDCSKKCIGYYEYRTEKGTDPESTTSPARFVYAPVGIGVRTNSTFAEHIPPRANLDTKQVYP
Subjt:  GKGFGGGGGGGGCTIDCSKKCIGYYEYRTEKGTDPESTTSPARFVYAPVGIGVRTNSTFAEHIPPRANLDTKQVYP

XP_022950168.1 heterogeneous nuclear ribonucleoprotein A3 homolog 2-like [Cucurbita moschata]1.6e-5996.77Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        MN SLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKG YGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
Subjt:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCSKKCIGY
         KGFGGGGGGGGCTIDCS+KCIGY
Subjt:  GKGFGGGGGGGGCTIDCSKKCIGY

XP_022977844.1 ATP-dependent RNA helicase A-like [Cucurbita maxima]2.4e-6095.97Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        MN SLPISALLLA+LLLSPSASLAAG+FEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTV+CKE+GPCYNKKVTCPAKCFSSYSRS
Subjt:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCSKKCIGY
        GKGFGGGGGGGGCTIDCSKKCIGY
Subjt:  GKGFGGGGGGGGCTIDCSKKCIGY

XP_023543509.1 ATP-dependent RNA helicase A [Cucurbita pepo subsp. pepo]1.9e-6098.39Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        MN SL ISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
Subjt:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCSKKCIGY
        GKGFGGGGGGGGCTIDCSKKCIGY
Subjt:  GKGFGGGGGGGGCTIDCSKKCIGY

TrEMBL top hitse value%identityAlignment
A0A0A0KHJ2 Uncharacterized protein2.9e-5180.3Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAA--------GMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAK
        MNL +PI   L+A+LLLSPS SLA         GMF PG GF DIPGF KGWDKGI+GGGYGGGYGGPKGGYGKGGIIRN+VVCK KGPCYNKKVTCPAK
Subjt:  MNLSLPISALLLAVLLLSPSASLAA--------GMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGY
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY

A0A5A7UGS4 Ctenidin-3-like3.8e-5180.3Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLA--------AGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAK
        MN  +PI   L+A+LLLSPS SLA         GMF PG GFDDIPGF KGWDKGIVGGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCPAK
Subjt:  MNLSLPISALLLAVLLLSPSASLA--------AGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAK

Query:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY
        CFSSYSRSGKG+GGGGGGGGCTIDC+KKCIGY
Subjt:  CFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY

A0A6J1EFI3 neuropeptide-like protein 319.1e-5382.09Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAA----------GMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCP
        MN  + IS LL+AVLLLSP+ SLA           GMF PG GFDDIPGF KGWDKGI+GGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCP
Subjt:  MNLSLPISALLLAVLLLSPSASLAA----------GMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCP

Query:  AKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY
        AKCFSSYSRSGKGFGGGGGGGGCTIDC+KKCIGY
Subjt:  AKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY

A0A6J1GE63 heterogeneous nuclear ribonucleoprotein A3 homolog 2-like7.7e-6096.77Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        MN SLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKG YGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
Subjt:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCSKKCIGY
         KGFGGGGGGGGCTIDCS+KCIGY
Subjt:  GKGFGGGGGGGGCTIDCSKKCIGY

A0A6J1ISI2 ATP-dependent RNA helicase A-like1.2e-6095.97Show/hide
Query:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS
        MN SLPISALLLA+LLLSPSASLAAG+FEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTV+CKE+GPCYNKKVTCPAKCFSSYSRS
Subjt:  MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRS

Query:  GKGFGGGGGGGGCTIDCSKKCIGY
        GKGFGGGGGGGGCTIDCSKKCIGY
Subjt:  GKGFGGGGGGGGCTIDCSKKCIGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61255.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)2.9e-1954.55Show/hide
Query:  FEPGGGFDDIPGFRKGWDKGIV--GGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY
        +  G G    PG       G +  G G GG Y    GGY KG  +R TV+C+EKG CY KK+TCPAKCF S SR GKG+  GGGGGGCTIDC KKC+ Y
Subjt:  FEPGGGFDDIPGFRKGWDKGIV--GGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY

AT4G21620.1 glycine-rich protein3.2e-3471.58Show/hide
Query:  PGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY
        PG GF  IPGF  G+    VGGGYGGG+GGP GG+GKGG++R TV CKEKGPC  KK+ CPAKCF S+SRSGKG+GGGGGGGGCT+DC KKCI Y
Subjt:  PGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY

AT4G21620.2 glycine-rich protein2.7e-2576.19Show/hide
Query:  GGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY
        GG+GKGG++R TV CKEKGPC  KK+ CPAKCF S+SRSGKG+GGGGGGGGCT+DC KKCI Y
Subjt:  GGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTCTCCCTCCCCATTTCCGCTCTTCTCCTCGCCGTTCTCCTCCTCTCCCCCTCCGCCTCTCTCGCCGCCGGGATGTTCGAACCCGGCGGCGGATTTGATGACAT
ACCCGGCTTTCGGAAAGGCTGGGACAAGGGGATCGTCGGTGGTGGCTACGGCGGTGGCTACGGCGGACCCAAAGGCGGTTACGGTAAGGGTGGCATCATAAGGAACACTG
TGGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCCAAGTGCTTCTCCTCTTATAGCCGATCGGGCAAGGGATTCGGAGGCGGCGGCGGCGGC
GGTGGCTGCACCATCGACTGCTCTAAGAAGTGTATTGGCTATTATGAGTATAGAACTGAGAAGGGTACTGATCCTGAATCTACTACTAGCCCTGCTCGTTTTGTTTATGC
TCCTGTGGGAATTGGCGTTCGAACCAACTCGACATTCGCTGAACATATTCCTCCCCGAGCTAATCTGGATACCAAGCAAGTATATCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTCTCCCTCCCCATTTCCGCTCTTCTCCTCGCCGTTCTCCTCCTCTCCCCCTCCGCCTCTCTCGCCGCCGGGATGTTCGAACCCGGCGGCGGATTTGATGACAT
ACCCGGCTTTCGGAAAGGCTGGGACAAGGGGATCGTCGGTGGTGGCTACGGCGGTGGCTACGGCGGACCCAAAGGCGGTTACGGTAAGGGTGGCATCATAAGGAACACTG
TGGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCCAAGTGCTTCTCCTCTTATAGCCGATCGGGCAAGGGATTCGGAGGCGGCGGCGGCGGC
GGTGGCTGCACCATCGACTGCTCTAAGAAGTGTATTGGCTATTATGAGTATAGAACTGAGAAGGGTACTGATCCTGAATCTACTACTAGCCCTGCTCGTTTTGTTTATGC
TCCTGTGGGAATTGGCGTTCGAACCAACTCGACATTCGCTGAACATATTCCTCCCCGAGCTAATCTGGATACCAAGCAAGTATATCCCTGA
Protein sequenceShow/hide protein sequence
MNLSLPISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGG
GGCTIDCSKKCIGYYEYRTEKGTDPESTTSPARFVYAPVGIGVRTNSTFAEHIPPRANLDTKQVYP