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Carg13772 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13772
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontwo-component response regulator-like APRR7
Genome locationCarg_Chr03:4749477..4749827
RNA-Seq ExpressionCarg13772
SyntenyCarg13772
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
GO:0007623 - circadian rhythm (biological process)
GO:0010017 - red or far-red light signaling pathway (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603696.1 Two-component response regulator-like APRR7, partial [Cucurbita argyrosperma subsp. sororia]3.1e-56100Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYE
        RHLVTALLRNCSYE
Subjt:  RHLVTALLRNCSYE

KAG7033873.1 Two-component response regulator-like APRR7, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-57100Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYEGR
        RHLVTALLRNCSYEGR
Subjt:  RHLVTALLRNCSYEGR

XP_022949843.1 two-component response regulator-like APRR7 [Cucurbita moschata]3.1e-56100Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYE
        RHLVTALLRNCSYE
Subjt:  RHLVTALLRNCSYE

XP_022977763.1 two-component response regulator-like APRR7 [Cucurbita maxima]3.1e-56100Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYE
        RHLVTALLRNCSYE
Subjt:  RHLVTALLRNCSYE

XP_023543776.1 two-component response regulator-like APRR7 [Cucurbita pepo subsp. pepo]1.0e-5497.37Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        MNAHASRQNGLRETSHHARDGNGI+NSGVSGREQSPVEENELKVNGL+RN EDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYE
        RHLVTALLRNCSYE
Subjt:  RHLVTALLRNCSYE

TrEMBL top hitse value%identityAlignment
A0A0A0KX32 Uncharacterized protein1.2e-4890.35Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        MNAHA R   LRETSHHA DGNG VN+GVSGREQSPVEENELKVNGLTRNTEDGRKSTV AQDILQI QQQ PQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYE
        RHLVTALL NCSYE
Subjt:  RHLVTALLRNCSYE

A0A1S4DXA5 two-component response regulator-like APRR75.8e-4887.72Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        M+AHA R   LRET+HHA DGNG VN+GVSGREQSPVEENELK+NGL RNTEDGRKSTV AQDILQI QQQ PQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYE
        RHLVTALLRNCSYE
Subjt:  RHLVTALLRNCSYE

A0A5A7TUS5 Two-component response regulator-like APRR79.3e-4691.35Show/hide
Query:  LRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRN
        LRET+HHA DGNG VN+GVSGREQSPVEENELK+NGL RNTEDGRKSTV AQDILQI QQQ PQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRN
Subjt:  LRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRN

Query:  CSYE
        CSYE
Subjt:  CSYE

A0A6J1GD68 two-component response regulator-like APRR71.5e-56100Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYE
        RHLVTALLRNCSYE
Subjt:  RHLVTALLRNCSYE

A0A6J1IKW2 two-component response regulator-like APRR71.5e-56100Show/hide
Query:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
        MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST
Subjt:  MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDST

Query:  RHLVTALLRNCSYE
        RHLVTALLRNCSYE
Subjt:  RHLVTALLRNCSYE

SwissProt top hitse value%identityAlignment
A2XFB7 Two-component response regulator-like PRR739.3e-1144.68Show/hide
Query:  GNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        GNGI+ +G S +     EE E + NG+  +  +G  +  + Q   Q  +Q+  Q  +V WERFL +++L+VLLVENDDSTR +V+ALLR C YE
Subjt:  GNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE

A2YQ93 Two-component response regulator-like PRR374.3e-0860Show/hide
Query:  QQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        Q+ PQ   VCWERF+  +++KVLLV++DDSTR +V+ALLR+C YE
Subjt:  QQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE

Q10N34 Two-component response regulator-like PRR739.3e-1144.68Show/hide
Query:  GNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        GNGI+ +G S +     EE E + NG+  +  +G  +  + Q   Q  +Q+  Q  +V WERFL +++L+VLLVENDDSTR +V+ALLR C YE
Subjt:  GNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE

Q93WK5 Two-component response regulator-like APRR72.6e-1349.41Show/hide
Query:  REQSPVEEN--ELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        R +S  E++  E K NG+T +  +G    +Q    + + QQ     + VCWERFLH+R+++VLLVENDD TR++VTALLRNCSYE
Subjt:  REQSPVEEN--ELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE

Q9LVG4 Two-component response regulator-like APRR34.0e-1455.84Show/hide
Query:  EENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        EE+E +V    RNT + + S           QQQ P   +V WER+L +RSLKVLLVENDDSTRH+VTALL+NCSYE
Subjt:  EENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE

Arabidopsis top hitse value%identityAlignment
AT5G02810.1 pseudo-response regulator 71.9e-1449.41Show/hide
Query:  REQSPVEEN--ELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        R +S  E++  E K NG+T +  +G    +Q    + + QQ     + VCWERFLH+R+++VLLVENDD TR++VTALLRNCSYE
Subjt:  REQSPVEEN--ELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE

AT5G24470.1 pseudo-response regulator 56.4e-0764.86Show/hide
Query:  MVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSY
        +V WERFL   +L+VLLVE DDSTR ++ ALLR CSY
Subjt:  MVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSY

AT5G60100.1 pseudo-response regulator 32.9e-1555.84Show/hide
Query:  EENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        EE+E +V    RNT + + S           QQQ P   +V WER+L +RSLKVLLVENDDSTRH+VTALL+NCSYE
Subjt:  EENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE

AT5G60100.2 pseudo-response regulator 32.9e-1555.84Show/hide
Query:  EENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        EE+E +V    RNT + + S           QQQ P   +V WER+L +RSLKVLLVENDDSTRH+VTALL+NCSYE
Subjt:  EENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE

AT5G60100.3 pseudo-response regulator 32.9e-1555.84Show/hide
Query:  EENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE
        EE+E +V    RNT + + S           QQQ P   +V WER+L +RSLKVLLVENDDSTRH+VTALL+NCSYE
Subjt:  EENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTCATGCTAGCAGGCAGAATGGGTTAAGAGAAACAAGTCACCACGCACGGGATGGTAATGGAATCGTGAACAGTGGTGTATCTGGCAGGGAACAGAGCCCAGT
TGAGGAAAACGAGTTGAAGGTCAATGGATTAACTAGAAATACAGAAGATGGACGAAAATCCACCGTTCAAGCCCAGGACATTCTGCAAATACATCAGCAGCAGCATCCTC
AAGGGTCTATGGTCTGCTGGGAGAGATTTCTTCATCTTAGGTCCCTCAAGGTTTTGCTTGTAGAAAATGATGATTCCACCCGGCACCTAGTCACTGCACTGCTTCGTAAT
TGCAGTTATGAAGGTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCTCATGCTAGCAGGCAGAATGGGTTAAGAGAAACAAGTCACCACGCACGGGATGGTAATGGAATCGTGAACAGTGGTGTATCTGGCAGGGAACAGAGCCCAGT
TGAGGAAAACGAGTTGAAGGTCAATGGATTAACTAGAAATACAGAAGATGGACGAAAATCCACCGTTCAAGCCCAGGACATTCTGCAAATACATCAGCAGCAGCATCCTC
AAGGGTCTATGGTCTGCTGGGAGAGATTTCTTCATCTTAGGTCCCTCAAGGTTTTGCTTGTAGAAAATGATGATTCCACCCGGCACCTAGTCACTGCACTGCTTCGTAAT
TGCAGTTATGAAGGTCGGTAA
Protein sequenceShow/hide protein sequence
MNAHASRQNGLRETSHHARDGNGIVNSGVSGREQSPVEENELKVNGLTRNTEDGRKSTVQAQDILQIHQQQHPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRN
CSYEGR