; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13775 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13775
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionZinc finger CCHC domain-containing protein 10
Genome locationCarg_Chr03:4734429..4736273
RNA-Seq ExpressionCarg13775
SyntenyCarg13775
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603693.1 hypothetical protein SDJN03_04302, partial [Cucurbita argyrosperma subsp. sororia]3.3e-76100Show/hide
Query:  MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSE
        MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSE
Subjt:  MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSE

Query:  NVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR
        NVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR
Subjt:  NVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR

KAG7033870.1 hypothetical protein SDJN02_03595 [Cucurbita argyrosperma subsp. argyrosperma]7.1e-87100Show/hide
Query:  MKTDNEMDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWT
        MKTDNEMDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWT
Subjt:  MKTDNEMDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWT

Query:  NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY
        NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY
Subjt:  NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY

XP_022949859.1 uncharacterized protein LOC111453128 [Cucurbita moschata]7.6e-8198.86Show/hide
Query:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALK
        MDLVACSGKKM+VGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALK
Subjt:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALK

Query:  ETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR
        ETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDP RSSQIPQRKDQR
Subjt:  ETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR

XP_022977780.1 uncharacterized protein LOC111477978 [Cucurbita maxima]2.1e-7088.46Show/hide
Query:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEI------WT
        MDLVAC GKKMEVGKGLKTLDCLRGRLLAER+ASRSAKEEAQLM EKLIELENQ RKETELRNKAEKRLKLLIKKLES NIASSTSLVASEI       T
Subjt:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEI------WT

Query:  NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY
        N S LKETENQESRS+ V+STIS+NQCEKVPEIATSKQRDEK+PNQNTPDRANSSPNSES NNSCTDPHRSSQI QRKDQRY
Subjt:  NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY

XP_023543783.1 uncharacterized protein LOC111803551 [Cucurbita pepo subsp. pepo]3.6e-7591.76Show/hide
Query:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEI------WT
        MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIR+ETELRNKAEKRLKLLIKKLES NIASSTSLVASEI       T
Subjt:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEI------WT

Query:  NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY
        N SALKETENQESRSENV+STIS+NQCEKVPEIATSKQRDEK+PNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQ +
Subjt:  NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY

TrEMBL top hitse value%identityAlignment
A0A1S3BHR6 uncharacterized protein LOC1034897696.3e-4971.35Show/hide
Query:  SGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIAS-STSLVASEIWTNFSALKETENQ
        SG KM+V KGLKTL+CLRGRLLAERQASRSAKEEA+LMGEKL++LENQIRKETELRNKAEKRL+LLIKKLES N AS S +  ASEI TN S  KETE+Q
Subjt:  SGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIAS-STSLVASEIWTNFSALKETENQ

Query:  ESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY
        E +SE + STI +NQC+K+  I TSKQ DEK+PN+NTPDR NS PNSES NN   DP  +S+IP  KDQ +
Subjt:  ESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY

A0A5A7TZE9 Zinc finger CCHC domain-containing protein 106.3e-4971.35Show/hide
Query:  SGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIAS-STSLVASEIWTNFSALKETENQ
        SG KM+V KGLKTL+CLRGRLLAERQASRSAKEEA+LMGEKL++LENQIRKETELRNKAEKRL+LLIKKLES N AS S +  ASEI TN S  KETE+Q
Subjt:  SGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIAS-STSLVASEIWTNFSALKETENQ

Query:  ESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY
        E +SE + STI +NQC+K+  I TSKQ DEK+PN+NTPDR NS PNSES NN   DP  +S+IP  KDQ +
Subjt:  ESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY

A0A6J1CS61 uncharacterized protein LOC111013694 isoform X14.1e-4872Show/hide
Query:  SGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIAS----STSLVASEIWTNFSALKET
        SGKKME G+GL TLDCLRGRLLAERQASRSAKEEA+ MG+K+IELENQIRKETELRNKAEKRLKLLIKKLES NIAS    S +  +SEI TN SA KET
Subjt:  SGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIAS----STSLVASEIWTNFSALKET

Query:  ENQESRSENVESTISKNQCEK-VPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY
        E+QESRSE       +NQ EK VP+IA  KQRDE + NQN PD+ NSSPN+ES NNSCTDPHR SQI + +DQ +
Subjt:  ENQESRSENVESTISKNQCEK-VPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY

A0A6J1GE52 uncharacterized protein LOC1114531283.7e-8198.86Show/hide
Query:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALK
        MDLVACSGKKM+VGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALK
Subjt:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALK

Query:  ETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR
        ETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDP RSSQIPQRKDQR
Subjt:  ETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR

A0A6J1INA8 uncharacterized protein LOC1114779781.0e-7088.46Show/hide
Query:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEI------WT
        MDLVAC GKKMEVGKGLKTLDCLRGRLLAER+ASRSAKEEAQLM EKLIELENQ RKETELRNKAEKRLKLLIKKLES NIASSTSLVASEI       T
Subjt:  MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEI------WT

Query:  NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY
        N S LKETENQESRS+ V+STIS+NQCEKVPEIATSKQRDEK+PNQNTPDRANSSPNSES NNSCTDPHRSSQI QRKDQRY
Subjt:  NFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37300.1 unknown protein5.9e-1542.34Show/hide
Query:  EVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLE-------SFNIASSTSLVASEIWTNFSALKETEN
        E  +G +T++CLRGRLLAERQ SRSAKEEA+L+  K+ ELE  +++E  LR KAEKRLKLL+KKLE       S   +SS     S + T+ S  +E E 
Subjt:  EVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLE-------SFNIASSTSLVASEIWTNFSALKETEN

Query:  QES----------RSENVESTISKNQCEKVPEIATSK
         +S           +ENV ST   +   K+ ++++ +
Subjt:  QES----------RSENVESTISKNQCEKVPEIATSK

AT2G37300.2 unknown protein5.9e-1541.78Show/hide
Query:  SGKKM----EVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLE-------SFNIASSTSLVASEIWTN
        + KKM    E  +G +T++CLRGRLLAERQ SRSAKEEA+L+  K+ ELE  +++E  LR KAEKRLKLL+KKLE       S   +SS     S + T+
Subjt:  SGKKM----EVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLE-------SFNIASSTSLVASEIWTN

Query:  FSALKETENQES----------RSENVESTISKNQCEKVPEIATSK
         S  +E E  +S           +ENV ST   +   K+ ++++ +
Subjt:  FSALKETENQES----------RSENVESTISKNQCEKVPEIATSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACAGACAATGAAATGGATTTGGTTGCTTGCAGTGGAAAGAAAATGGAAGTTGGGAAGGGTTTGAAAACTTTGGATTGCTTAAGGGGAAGATTGCTTGCAGAAAG
ACAAGCTTCAAGATCGGCCAAAGAAGAGGCACAGCTTATGGGGGAAAAGTTGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCTGAGAAGA
GGCTTAAACTCTTGATAAAGAAGCTTGAATCCTTCAACATTGCCTCCTCAACATCATTAGTAGCCTCAGAAATTTGGACAAATTTCTCAGCCTTGAAGGAAACAGAAAAC
CAAGAATCAAGATCAGAGAATGTGGAATCAACGATCTCGAAAAATCAATGCGAGAAAGTTCCAGAAATCGCCACATCCAAACAGCGCGATGAGAAAGAACCTAATCAGAA
TACTCCAGATCGAGCAAATTCAAGCCCTAACTCCGAATCTCGCAACAATTCCTGCACCGATCCCCACCGATCTTCTCAAATCCCTCAAAGAAAAGATCAGAGGTACTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAGATGACTCTTTTATTCATTACAGCATAAAGAATAAAGAATCTATAACCTATTAGGGTAAGTATAGACTACACATTATTTAATTTAAAGGGCACAGAACCCTAAGC
CCTTTCATCCACAAGGTTCCTTTTCTTTCAATAAATTAACAAACTATCATCCAATTAAACTAAACATAGAAGAGAAAGAAAGCTTAATAGTCTTTAATTTAGAAAATTAA
GGATGGGTGGGTTCTAAATAGTTTGAACAAATATGACCTCCAATCTTTGCAAACTTCATACACTGGATTTGATTAACATAATCATAATTTGTAAGCAGTTTTTGCTTCAC
AAGAAACCCAGAAAGCTTGTGCAAACAGTAAAAAGTTAGCATTATTTTAGAAATTCTGTTTTCCATCAACCACCGCCAAACAAATTCTTTGTCATGTATAGTAAATTTAT
GAGTCTAGACAGGAATTGCACAATAATAAATAAAGGGAGGGTTCAATTTTAGGAACTAGAAAGGGATGAACAACTGTCACGAAGGCATTGGGTATGGTTAATAATAAGAA
AGAGGCCAAGGCTCTGGGTTTGTGACACTGACTACAGCATCTTGGTTTCTGAACTATCATCGAATCTCCACTCCAAGAACGAGACGAGTGATTTAAATTTGCTAAAACCC
TTCTCTCCCCAGATTTCTATTTCATTTCTGAGTGCAATTTCACTCGTTTTAAGCTGAGGGATTGCTATGATGGTGAATGTAGCAGATTGCTGGAGTTTTCTGGACTGAGA
GGCAAAGAAAATGATGGCTACTTGCAATGAAGACAGACAATGAAATGGATTTGGTTGCTTGCAGTGGAAAGAAAATGGAAGTTGGGAAGGGTTTGAAAACTTTGGATTGC
TTAAGGGGAAGATTGCTTGCAGAAAGACAAGCTTCAAGATCGGCCAAAGAAGAGGCACAGCTTATGGGGGAAAAGTTGATAGAGTTGGAGAATCAGATTAGAAAGGAGAC
AGAGCTAAGGAACAAAGCTGAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCTTCAACATTGCCTCCTCAACATCATTAGTAGCCTCAGAAATTTGGACAAATT
TCTCAGCCTTGAAGGAAACAGAAAACCAAGAATCAAGATCAGAGAATGTGGAATCAACGATCTCGAAAAATCAATGCGAGAAAGTTCCAGAAATCGCCACATCCAAACAG
CGCGATGAGAAAGAACCTAATCAGAATACTCCAGATCGAGCAAATTCAAGCCCTAACTCCGAATCTCGCAACAATTCCTGCACCGATCCCCACCGATCTTCTCAAATCCC
TCAAAGAAAAGATCAGAGGTACTAAAATTCCCGCTCCCGCTCCCCCTCAAACTCGCAAAACTTCACCATTTACATATGAATTAACCTAAGCACCGCCCTAATTACGATTA
CAATTGTTTCAAGCTTTTCAGGATAAGTAAAGGAGAAAGAGAACAAGCATTACACTGATAATTTGATAGCATCTGTTCCCGGAGCGACGCCGGCGGCGAACTCAAAGACG
GGGGCGATGAAGATGAAAGCAATCCACGAGAGGGCAACAGAAGTTCATGATGCTCCAAAGCACATCAGTGGAAATGTCCAGAACTCATTTAAATTATAGAAATTAGATGG
AAACGCAGTGTCTCTCTATATGAAGAAAGAACGAAACCCAAAAATATTTAGAAAAACAAAGGTTTGAGAGCTTTTTGGCTAACAAAATCTTTTTCAACAAAGAATTCACA
AA
Protein sequenceShow/hide protein sequence
MKTDNEMDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETEN
QESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRY