; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13779 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13779
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpathogenesis-related protein 1-like
Genome locationCarg_Chr03:4723567..4724484
RNA-Seq ExpressionCarg13779
SyntenyCarg13779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603689.1 hypothetical protein SDJN03_04298, partial [Cucurbita argyrosperma subsp. sororia]3.7e-5551.8Show/hide
Query:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------
        MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVL+          
Subjt:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------TATATATATAGTAGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPH
                                            TATATATATAGTAGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPH
Subjt:  ------------------------------------TATATATATAGTAGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPH

Query:  RKLIG
        RKLIG
Subjt:  RKLIG

KAG7033866.1 hypothetical protein SDJN02_03591, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-74100Show/hide
Query:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLTTATATATATA
        MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLTTATATATATA
Subjt:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLTTATATATATA

Query:  GTAGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
        GTAGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
Subjt:  GTAGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG

XP_022949854.1 pathogenesis-related protein 1-like [Cucurbita moschata]1.9e-5152.43Show/hide
Query:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------
        MS PSVLPPLFLCIILLFIPIVSPETKISHS GRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVL+          
Subjt:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----TATATATATAGT--------------AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
             T  ATAT  A T              AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
Subjt:  -----TATATATATAGT--------------AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG

XP_022977774.1 pathogenesis-related protein 1-like [Cucurbita maxima]3.5e-4247.86Show/hide
Query:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------
        MS PS LPPLFLCIILLFIPIVSPETKISHS GRNR TATENPSPENQQSPSDGAT NPM RKHSKPLYAREFLTAHNKVRMNVTHP L+          
Subjt:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----TATATATATAGT------AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
             T  A+AT  A T       G  TA A A AGTAGT TAT NGGGGTVAVDL SKVPEPSPPSNEQ ISPHRK+IG
Subjt:  -----TATATATATAGT------AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG

XP_023544681.1 pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]6.5e-4448.61Show/hide
Query:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVL-----------
        MS PSVLPPLFLCIILLFIPIVSPETKISHS GRNRPTATENPSP+N+QSPSDGAT NPMPRKHSKPLYAREFLTAHNKVRMNVTHP L           
Subjt:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVL-----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------TTATATATATAGTAGTATA---TATATAGT----AGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
                   T   AT T T   AGTATA   TATA AGT    AGTATATA GGGGTVAVDL SKVPEPSPPSNEQ ISPHRK+IG
Subjt:  -----------TTATATATATAGTAGTATA---TATATAGT----AGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG

TrEMBL top hitse value%identityAlignment
A0A0A0L0R9 SCP domain-containing protein6.4e-0543.75Show/hide
Query:  LFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVL
        L LCI LL +PI+S + + S + GRN     + P+P  +              +HSK  +AREFL AHNKVR+NVTHP+L
Subjt:  LFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVL

A0A6J1GE47 pathogenesis-related protein 1-like9.1e-5252.43Show/hide
Query:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------
        MS PSVLPPLFLCIILLFIPIVSPETKISHS GRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVL+          
Subjt:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----TATATATATAGT--------------AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
             T  ATAT  A T              AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
Subjt:  -----TATATATATAGT--------------AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG

A0A6J1ISC1 pathogenesis-related protein 1-like1.7e-4247.86Show/hide
Query:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------
        MS PS LPPLFLCIILLFIPIVSPETKISHS GRNR TATENPSPENQQSPSDGAT NPM RKHSKPLYAREFLTAHNKVRMNVTHP L+          
Subjt:  MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLT----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----TATATATATAGT------AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG
             T  A+AT  A T       G  TA A A AGTAGT TAT NGGGGTVAVDL SKVPEPSPPSNEQ ISPHRK+IG
Subjt:  -----TATATATATAGT------AGTATATATATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACGCCTTCAGTTCTTCCTCCTCTCTTTCTCTGCATCATTCTCCTCTTCATCCCGATCGTCTCGCCGGAGACCAAAATATCCCATTCCAGAGGAAGAAATAGACC
GACCGCGACGGAAAATCCCTCGCCGGAGAACCAACAGTCCCCTTCCGATGGCGCGACGGAGAATCCGATGCCGCGTAAACACTCCAAGCCTTTATACGCTCGCGAATTTC
TGACAGCGCATAACAAAGTGAGGATGAACGTGACGCATCCTGTGTTAACCACAGCCACAGCCACAGCCACAGCCACAGCCGGAACAGCCGGTACAGCCACAGCCACAGCC
ACAGCCACAGCCGGAACAGCCGGTACAGCCACAGCCACCGCCAATGGCGGAGGCGGAACCGTCGCCGTTGATCTGAAATCGAAAGTACCTGAACCGTCACCGCCGTCTAA
CGAACAAATCATCTCGCCTCACCGGAAACTCATCGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACGCCTTCAGTTCTTCCTCCTCTCTTTCTCTGCATCATTCTCCTCTTCATCCCGATCGTCTCGCCGGAGACCAAAATATCCCATTCCAGAGGAAGAAATAGACC
GACCGCGACGGAAAATCCCTCGCCGGAGAACCAACAGTCCCCTTCCGATGGCGCGACGGAGAATCCGATGCCGCGTAAACACTCCAAGCCTTTATACGCTCGCGAATTTC
TGACAGCGCATAACAAAGTGAGGATGAACGTGACGCATCCTGTGTTAACCACAGCCACAGCCACAGCCACAGCCACAGCCGGAACAGCCGGTACAGCCACAGCCACAGCC
ACAGCCACAGCCGGAACAGCCGGTACAGCCACAGCCACCGCCAATGGCGGAGGCGGAACCGTCGCCGTTGATCTGAAATCGAAAGTACCTGAACCGTCACCGCCGTCTAA
CGAACAAATCATCTCGCCTCACCGGAAACTCATCGGTTGA
Protein sequenceShow/hide protein sequence
MSTPSVLPPLFLCIILLFIPIVSPETKISHSRGRNRPTATENPSPENQQSPSDGATENPMPRKHSKPLYAREFLTAHNKVRMNVTHPVLTTATATATATAGTAGTATATA
TATAGTAGTATATANGGGGTVAVDLKSKVPEPSPPSNEQIISPHRKLIG