CuGenDBv2

Gene ID	Carg13795
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RAB GTPase homolog 8A
Genome location	Carg_Chr03:4633862..4636882
RNA-Seq Expression	Carg13795
Synteny	Carg13795
Gene Ontology terms	GO:0006904 - vesicle docking involved in exocytosis (biological process) GO:0009306 - protein secretion (biological process) GO:0017157 - regulation of exocytosis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003925 - G protein activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7033850.1 Ras-related protein RABE1a [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-62

100

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQRSACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

XP_004142084.1 ras-related protein RABE1a [Cucumis sativus]

4.2e-62

99.22

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQRSACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

XP_008447565.1 PREDICTED: ras-related protein RABE1a [Cucumis melo]

1.2e-61

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSK 
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQRSACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

XP_022143832.1 ras-related protein RABE1a-like [Momordica charantia]

9.4e-62

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQ+SACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

XP_022949825.1 ras-related protein RABE1a-like [Cucurbita moschata]

1.9e-62

100

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQRSACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L249 Uncharacterized protein

2.1e-62

99.22

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQRSACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

A0A1S3BIM8 ras-related protein RABE1a

6.0e-62

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSK 
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQRSACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

A0A6J1CS03 ras-related protein RABE1a-like

4.6e-62

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQ+SACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

A0A6J1GDV8 ras-related protein RABE1a-like

9.2e-63

100

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQRSACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

A0A6J1IQN1 ras-related protein RABE1a

2.1e-62

99.22

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQPDQGAGAAQAAQRSACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

SwissProt top hits

e value

%identity

Alignment

O24466 Ras-related protein RABE1a

2.0e-59

89.84

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG++FFETSAKTNLNVEEVFFSIA+DIKQRLADTD++A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQ DQGAG +QA Q+SACCG+
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

P28186 Ras-related protein RABE1c

5.9e-59

89.84

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGI+FFETSAKTNLNVEEVFFSI RDIKQRL+DTDS+A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EP TIKI+Q DQ AGA QA Q+SACCG+
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

Q39433 Ras-related protein RAB1BV

7.0e-52

84.5

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLAD+D++ 
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQ-TIKINQPDQGAGAAQAAQRSACCGS
        E Q +I I   DQ     QAA +SACCGS
Subjt:  EPQ-TIKINQPDQGAGAAQAAQRSACCGS

Q9LZD4 Ras-related protein RABE1d

2.7e-51

81.75

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNW++NIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGI+FFETSAKTNLNVE VF SIA+DIKQRL +TD+KA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACC
        EPQ IKI + D  A ++  A++SACC
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACC

Q9SF91 Ras-related protein RABE1e

2.5e-49

78.74

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNW++NIEQHASD+VNKILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTN NVE+VF SIA+DIKQRL ++D+KA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQG-AGAAQAAQRSACC
        EPQ IKI + D   A ++   ++SACC
Subjt:  EPQTIKINQPDQG-AGAAQAAQRSACC

Arabidopsis top hits

e value

%identity

Alignment

AT3G46060.1 RAB GTPase homolog 8A

4.2e-60

89.84

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGI+FFETSAKTNLNVEEVFFSI RDIKQRL+DTDS+A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EP TIKI+Q DQ AGA QA Q+SACCG+
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

AT3G53610.1 RAB GTPase homolog 8

1.5e-60

89.84

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG++FFETSAKTNLNVEEVFFSIA+DIKQRLADTD++A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQ DQGAG +QA Q+SACCG+
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

AT3G53610.2 RAB GTPase homolog 8

1.5e-60

89.84

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG++FFETSAKTNLNVEEVFFSIA+DIKQRLADTD++A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQ DQGAG +QA Q+SACCG+
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

AT3G53610.3 RAB GTPase homolog 8

1.5e-60

89.84

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG++FFETSAKTNLNVEEVFFSIA+DIKQRLADTD++A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EPQTIKINQ DQGAG +QA Q+SACCG+
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

AT5G59840.1 Ras-related small GTP-binding family protein

1.5e-60

91.41

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVP SKGQALADEYGI+FFETSAKTNLNVEEVFFSIA+DIKQRLADTDS+A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA

Query:  EPQTIKINQPDQGAGAAQAAQRSACCGS
        EP TIKI+Q DQ AGA QA Q+SACCGS
Subjt:  EPQTIKINQPDQGAGAAQAAQRSACCGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTATTTTGCTTGTGTACGATGTAACTGATGAGTCCTCCTTTAACAACATTAGGAACTGGATTCGTAACATTGAACAACATGCTTCAGACAATGTTAACAAAATTCT
GGTCGGTAACAAAGCTGACATGGATGAGAGCAAAAGGGCTGTTCCCACCTCAAAGGGTCAAGCTCTTGCAGATGAATATGGCATCAGGTTCTTTGAGACTAGTGCTAAGA
CGAACTTAAACGTGGAAGAAGTTTTCTTCTCAATAGCTAGAGATATTAAACAAAGACTCGCTGATACTGATTCAAAAGCCGAGCCTCAGACAATCAAGATTAATCAACCA
GATCAGGGTGCAGGGGCTGCTCAAGCTGCTCAAAGATCAGCATGCTGCGGTTCTTAA

mRNA sequence

Show/hide mRNA sequence

CTACTGTTGGATTACATTTAAAATAGGCTGTAATTTGGTTTGATAATGTAAAATGGTGTTTGATGACGTTGCTTCAATATTTTTTGAATCCGCGTGGTGCTTGCAATCCA
TTGCGAGAGCATATGCTGCAAATTTTATGTTTGTCTGGAATGGAGTATTTCTTCATGGTTTGATATAACCTTTCCAGGTGTGGGGAAGAGTTGCCTTCTCTTGCGTTTCT
CGGATGGTTCCTTTACTACAAGTTTCATCACAACCATTGGCATTGATTTTAAGATAAGGACCATAGAGCTGGATGGAAAAAGGATCAAGCTACAAATTTGGGATACTGCT
GGACAGGAGCGGTTCAGAACAATTACTACTGCTTACTATCGTGGAGCCATGGGTATTTTGCTTGTGTACGATGTAACTGATGAGTCCTCCTTTAACAACATTAGGAACTG
GATTCGTAACATTGAACAACATGCTTCAGACAATGTTAACAAAATTCTGGTCGGTAACAAAGCTGACATGGATGAGAGCAAAAGGGCTGTTCCCACCTCAAAGGGTCAAG
CTCTTGCAGATGAATATGGCATCAGGTTCTTTGAGACTAGTGCTAAGACGAACTTAAACGTGGAAGAAGTTTTCTTCTCAATAGCTAGAGATATTAAACAAAGACTCGCT
GATACTGATTCAAAAGCCGAGCCTCAGACAATCAAGATTAATCAACCAGATCAGGGTGCAGGGGCTGCTCAAGCTGCTCAAAGATCAGCATGCTGCGGTTCTTAA

Protein sequence

Show/hide protein sequence

MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQP
DQGAGAAQAAQRSACCGS

Carg13795 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome