; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13806 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13806
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncyclin-dependent protein kinase inhibitor SMR2-like
Genome locationCarg_Chr03:4567239..4567691
RNA-Seq ExpressionCarg13806
SyntenyCarg13806
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603657.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]1.3e-78100Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP
        MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP

Query:  ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE
        ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE
Subjt:  ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE

XP_022143885.1 cyclin-dependent protein kinase inhibitor SMR2-like [Momordica charantia]3.6e-3660.13Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP
        MAS FQEIS    P+IS  +I +P+SF +NL DA NQIDF+FALN            +  ++   DSIS DDDGFRTPTSSDHKIPV++QCPPAPRRPKP
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP

Query:  ISC--SRTLPR-TSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE
        ISC   R+ PR  SGVRRGFRVYISDEI +SIF     HQK KKAR++ +  E
Subjt:  ISC--SRTLPR-TSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE

XP_022950456.1 uncharacterized protein LOC111453550 [Cucurbita moschata]1.3e-78100Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP
        MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP

Query:  ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE
        ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE
Subjt:  ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE

XP_023518540.1 uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo]3.7e-3358.86Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSI----SDDDDGFRTPTSSDHKIPVVQQCPPAPR
        MAS F+EIS             TP+SFRV L DA +QI+FIFA+ ++ PLA +S     D SAP +S+     DD+DGFRTPTSSD+KIP+V+ CPPAPR
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSI----SDDDDGFRTPTSSDHKIPVVQQCPPAPR

Query:  RPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFC----PDLLHQKTKKARKNGNGGE
        RPKPIS SRT PR SGVRRGFRVYISDEI DSIF      D L  K KKARK+ +GG+
Subjt:  RPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFC----PDLLHQKTKKARKNGNGGE

XP_038877666.1 cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida]1.1e-3764.33Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSIS---DDDDGFRTPTSSDHKIPVVQQCPPAPRR
        MAS FQEIS     +ISF+AIT   +FR+      NQIDFIF+LN++P           DR AP +SIS   DDDDGFRTP SSDHKIPVV+ CPPAP+R
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSIS---DDDDGFRTPTSSDHKIPVVQQCPPAPRR

Query:  PKPISCSRTLP-RTSGVRRGFRVYISDEIADSIFCPDLLHQKT-KKARK--NGNGGE
        PKPIS SRT   R SGVRRGFRVYISDEI DSIFC DLLHQK+ KKARK  + NGGE
Subjt:  PKPISCSRTLP-RTSGVRRGFRVYISDEIADSIFCPDLLHQKT-KKARK--NGNGGE

TrEMBL top hitse value%identityAlignment
A0A0A0KZJ9 Uncharacterized protein3.1e-2555.56Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFI---FALNDDPPLASDSVSVSLDRSAPPDSIS---DDD---DGFRTPTSSDHKIPVVQQC
        MAS FQEISP   P      +   Q   + L    + IDF+   F+    PP +  S S S+ +  PP SIS   DDD   DGF TP SS HKIPV+  C
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFI---FALNDDPPLASDSVSVSLDRSAPPDSIS---DDD---DGFRTPTSSDHKIPVVQQC

Query:  PPAPRRPKPISCSRTL-PRTSGVRRGFRVYISDEIADSIFCPDLLHQKT-KKARK-NGNGGE
        PPAP RPKPIS SRTL PR SGVRRGF VYISD+I DSIF  DLLHQK+ KKARK + NGGE
Subjt:  PPAPRRPKPISCSRTL-PRTSGVRRGFRVYISDEIADSIFCPDLLHQKT-KKARK-NGNGGE

A0A5A7SN91 Cyclin-dependent protein kinase inhibitor SMR3-like1.2e-2453.37Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIF-----ALNDDPPLASDSVSVSLDRSAPPDSIS--DDD----DGFRTPTSSDHKIPVVQ
        M S FQEISP   P +    +   Q   + L    + IDF+F     ++   P L S S S+   +  PP SIS  DDD    DGF TP SS HKIPV+ 
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIF-----ALNDDPPLASDSVSVSLDRSAPPDSIS--DDD----DGFRTPTSSDHKIPVVQ

Query:  QCPPAPRRPKPISCSRTL-PRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK-NGNGGE
         CPPAP RPKPIS SRTL  R S VRRGF VYISDEI DSIF  DLLH K+KKARK + NGGE
Subjt:  QCPPAPRRPKPISCSRTL-PRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK-NGNGGE

A0A5D3AH22 Uncharacterized protein3.0e-1247.37Show/hide
Query:  VSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSR----TLPRTSGVRRGFRVYISDEIADSIFCPDLL---HQKTKKARK
        +SL      D   DDDDGF+TPTS DHKIPV++QCPPAPR+PKP+S  +    + P + G R   ++  + E+ +S+F  D+L   H+K KKARK
Subjt:  VSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSR----TLPRTSGVRRGFRVYISDEIADSIFCPDLL---HQKTKKARK

A0A6J1CQ22 cyclin-dependent protein kinase inhibitor SMR2-like1.7e-3660.13Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP
        MAS FQEIS    P+IS  +I +P+SF +NL DA NQIDF+FALN            +  ++   DSIS DDDGFRTPTSSDHKIPV++QCPPAPRRPKP
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP

Query:  ISC--SRTLPR-TSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE
        ISC   R+ PR  SGVRRGFRVYISDEI +SIF     HQK KKAR++ +  E
Subjt:  ISC--SRTLPR-TSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE

A0A6J1GEW0 uncharacterized protein LOC1114535506.3e-79100Show/hide
Query:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP
        MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP
Subjt:  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKP

Query:  ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE
        ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE
Subjt:  ISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE

SwissProt top hitse value%identityAlignment
Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR31.8e-0641.98Show/hide
Query:  DSISDDDDGFRTPTSSDHKIPVVQQ--CPPAPRRPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK
        D   ++++G +TPTSSDHKIP V+   CPPAPR+PKP   S T  + + V    R+ I       +F  D L ++ KK+RK
Subjt:  DSISDDDDGFRTPTSSDHKIPVVQQ--CPPAPRRPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR21.7e-0438.57Show/hide
Query:  TPTSSDHKIPVVQQCPPAPR-RPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKN
        TPTSSDHKIP V+ CPP PR RP+ IS ++    +  +R      +  +  +++F  +  H + KK R N
Subjt:  TPTSSDHKIPVVQQCPPAPR-RPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKN

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein1.2e-0538.57Show/hide
Query:  TPTSSDHKIPVVQQCPPAPR-RPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKN
        TPTSSDHKIP V+ CPP PR RP+ IS ++    +  +R      +  +  +++F  +  H + KK R N
Subjt:  TPTSSDHKIPVVQQCPPAPR-RPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKN

AT2G37610.1 unknown protein3.0e-0441.03Show/hide
Query:  LDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRR
        LD     + + +++DGF+TPT  +++IP+V++CPPAP +
Subjt:  LDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRR

AT5G02420.1 unknown protein1.3e-0741.98Show/hide
Query:  DSISDDDDGFRTPTSSDHKIPVVQQ--CPPAPRRPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK
        D   ++++G +TPTSSDHKIP V+   CPPAPR+PKP   S T  + + V    R+ I       +F  D L ++ KK+RK
Subjt:  DSISDDDDGFRTPTSSDHKIPVVQQ--CPPAPRRPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAGGATTCCAAGAAATCTCCCCCCTCACGCACCCTCGCATTTCCTTCACCGCCATTACTACGCCACAATCCTTCCGCGTCAATTTGAACGACGCCACGAACCA
GATCGATTTCATTTTCGCTCTAAACGATGATCCTCCACTCGCTTCCGATTCCGTTTCCGTTTCTCTCGATCGTTCCGCTCCACCAGACTCGATCTCCGACGACGACGACG
GTTTCAGAACGCCGACGTCTTCCGATCATAAGATTCCGGTGGTTCAACAGTGTCCGCCGGCTCCTAGACGACCGAAGCCGATCTCCTGCTCCAGAACCTTGCCGAGAACT
TCAGGTGTTCGTAGAGGTTTTCGAGTGTATATCTCAGACGAAATCGCGGACTCGATCTTCTGCCCCGATTTGCTGCACCAGAAGACTAAGAAAGCTCGGAAGAACGGTAA
TGGCGGTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAGGATTCCAAGAAATCTCCCCCCTCACGCACCCTCGCATTTCCTTCACCGCCATTACTACGCCACAATCCTTCCGCGTCAATTTGAACGACGCCACGAACCA
GATCGATTTCATTTTCGCTCTAAACGATGATCCTCCACTCGCTTCCGATTCCGTTTCCGTTTCTCTCGATCGTTCCGCTCCACCAGACTCGATCTCCGACGACGACGACG
GTTTCAGAACGCCGACGTCTTCCGATCATAAGATTCCGGTGGTTCAACAGTGTCCGCCGGCTCCTAGACGACCGAAGCCGATCTCCTGCTCCAGAACCTTGCCGAGAACT
TCAGGTGTTCGTAGAGGTTTTCGAGTGTATATCTCAGACGAAATCGCGGACTCGATCTTCTGCCCCGATTTGCTGCACCAGAAGACTAAGAAAGCTCGGAAGAACGGTAA
TGGCGGTGAATGA
Protein sequenceShow/hide protein sequence
MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRT
SGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE