; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13808 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13808
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:4557640..4559965
RNA-Seq ExpressionCarg13808
SyntenyCarg13808
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033837.1 hypothetical protein SDJN02_03562, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-176100Show/hide
Query:  MLYLFLFFYLPFLFLTIFFSCSKQYFFNEILSRISFRERSNEGLYLSNSFFICKVLIESIRRQYQESVGWAEFIMAQSWITGDVRSLYGSSCCATIARLS
        MLYLFLFFYLPFLFLTIFFSCSKQYFFNEILSRISFRERSNEGLYLSNSFFICKVLIESIRRQYQESVGWAEFIMAQSWITGDVRSLYGSSCCATIARLS
Subjt:  MLYLFLFFYLPFLFLTIFFSCSKQYFFNEILSRISFRERSNEGLYLSNSFFICKVLIESIRRQYQESVGWAEFIMAQSWITGDVRSLYGSSCCATIARLS

Query:  PTFIRSIRAVESIINSDKNPTIILRYHHVNSILTGLPLCPLYALTADKVIAIVFLRQTGLAAQMNTALSLSCILIILLVSRNGFGYGSLQNPNETSFRFR
        PTFIRSIRAVESIINSDKNPTIILRYHHVNSILTGLPLCPLYALTADKVIAIVFLRQTGLAAQMNTALSLSCILIILLVSRNGFGYGSLQNPNETSFRFR
Subjt:  PTFIRSIRAVESIINSDKNPTIILRYHHVNSILTGLPLCPLYALTADKVIAIVFLRQTGLAAQMNTALSLSCILIILLVSRNGFGYGSLQNPNETSFRFR

Query:  LSISNAAVRRPSQSSRSKPLDLSGPIRCSGRPRVRIRTLSPLDPKKGIHRNFPTSSGVAPAVAAQRQRNSSNRKQPPDQTWCYKDIDRPETWTAALRRWR
        LSISNAAVRRPSQSSRSKPLDLSGPIRCSGRPRVRIRTLSPLDPKKGIHRNFPTSSGVAPAVAAQRQRNSSNRKQPPDQTWCYKDIDRPETWTAALRRWR
Subjt:  LSISNAAVRRPSQSSRSKPLDLSGPIRCSGRPRVRIRTLSPLDPKKGIHRNFPTSSGVAPAVAAQRQRNSSNRKQPPDQTWCYKDIDRPETWTAALRRWR

Query:  LQRRRKSTGKWSLERCSHPGKL
        LQRRRKSTGKWSLERCSHPGKL
Subjt:  LQRRRKSTGKWSLERCSHPGKL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTATTTGTTTCTTTTCTTTTATCTTCCTTTCTTGTTTCTTACCATATTTTTTAGCTGCTCGAAACAATACTTCTTCAATGAGATTTTGAGCAGGATCTCCTTCAG
GGAAAGAAGCAATGAAGGACTCTACTTGAGCAACAGCTTCTTCATTTGTAAAGTATTGATAGAGTCCATCAGACGACAATATCAAGAATCTGTCGGTTGGGCTGAGTTTA
TAATGGCACAGAGTTGGATCACAGGTGATGTAAGGTCTCTGTATGGTTCGAGTTGCTGCGCTACAATTGCACGGCTGTCTCCTACATTCATCAGGAGCATCAGGGCCGTT
GAATCCATCATAAACTCCGACAAAAACCCAACCATTATCCTCCGATATCACCACGTGAACTCTATCCTCACCGGCCTTCCCCTGTGCCCACTGTACGCCCTGACCGCCGA
CAAAGTAATCGCCATCGTCTTCCTGCGCCAAACTGGCCTGGCTGCTCAAATGAACACTGCTTTGAGTCTGAGCTGCATTCTCATTATCCTTCTGGTTTCGAGAAATGGTT
TTGGATATGGCTCTCTTCAGAACCCGAATGAGACTTCTTTTCGATTTCGGTTGTCTATCTCCAACGCCGCCGTCCGCCGCCCTTCTCAATCGAGCCGGAGTAAACCACTC
GATCTATCGGGCCCGATTCGATGCTCCGGGAGGCCAAGGGTCCGGATAAGAACCCTCTCTCCATTGGACCCGAAGAAGGGAATCCACCGAAATTTCCCGACATCGAGTGG
CGTGGCACCGGCTGTAGCGGCACAGAGGCAAAGGAATTCGAGCAATCGAAAGCAGCCGCCCGATCAAACGTGGTGCTATAAGGATATAGATCGACCAGAGACGTGGACAG
CGGCGTTGAGACGTTGGCGCTTACAGAGGCGCCGGAAATCGACCGGAAAATGGTCGCTGGAGAGATGTAGTCATCCGGGAAAGCTT
mRNA sequenceShow/hide mRNA sequence
CCAAACAGTTCTGCTTTGGAATGTATTTGTATTGGATGCAAGTTGCAACACACGCACGCACGCACGCACAATTTGGGGTGGAAGACAGGCAAGAGGAAGCTGAACAACTT
ACTCTCTCTGTGTTGAAGGGAAATGATGATCACTGAAACGTCGTCGTGGTACTTCCGCCGCTCCCCTTGTGGGATATCAAGCAGCTCATGGAAGGCCATTCCTGCATGTT
TTCCAAATCACGTCAGTAAGTAAAGTTCGTACTCTCCTGACATATATGCTGTATTTGTTTCTTTTCTTTTATCTTCCTTTCTTGTTTCTTACCATATTTTTTAGCTGCTC
GAAACAATACTTCTTCAATGAGATTTTGAGCAGGATCTCCTTCAGGGAAAGAAGCAATGAAGGACTCTACTTGAGCAACAGCTTCTTCATTTGTAAAGTATTGATAGAGT
CCATCAGACGACAATATCAAGAATCTGTCGGTTGGGCTGAGTTTATAATGGCACAGAGTTGGATCACAGGTGATGTAAGGTCTCTGTATGGTTCGAGTTGCTGCGCTACA
ATTGCACGGCTGTCTCCTACATTCATCAGGAGCATCAGGGCCGTTGAATCCATCATAAACTCCGACAAAAACCCAACCATTATCCTCCGATATCACCACGTGAACTCTAT
CCTCACCGGCCTTCCCCTGTGCCCACTGTACGCCCTGACCGCCGACAAAGTAATCGCCATCGTCTTCCTGCGCCAAACTGGCCTGGCTGCTCAAATGAACACTGCTTTGA
GTCTGAGCTGCATTCTCATTATCCTTCTGGTTTCGAGAAATGGTTTTGGATATGGCTCTCTTCAGAACCCGAATGAGACTTCTTTTCGATTTCGGTTGTCTATCTCCAAC
GCCGCCGTCCGCCGCCCTTCTCAATCGAGCCGGAGTAAACCACTCGATCTATCGGGCCCGATTCGATGCTCCGGGAGGCCAAGGGTCCGGATAAGAACCCTCTCTCCATT
GGACCCGAAGAAGGGAATCCACCGAAATTTCCCGACATCGAGTGGCGTGGCACCGGCTGTAGCGGCACAGAGGCAAAGGAATTCGAGCAATCGAAAGCAGCCGCCCGATC
AAACGTGGTGCTATAAGGATATAGATCGACCAGAGACGTGGACAGCGGCGTTGAGACGTTGGCGCTTACAGAGGCGCCGGAAATCGACCGGAAAATGGTCGCTGGAGAGA
TGTAGTCATCCGGGAAAGCTT
Protein sequenceShow/hide protein sequence
MLYLFLFFYLPFLFLTIFFSCSKQYFFNEILSRISFRERSNEGLYLSNSFFICKVLIESIRRQYQESVGWAEFIMAQSWITGDVRSLYGSSCCATIARLSPTFIRSIRAV
ESIINSDKNPTIILRYHHVNSILTGLPLCPLYALTADKVIAIVFLRQTGLAAQMNTALSLSCILIILLVSRNGFGYGSLQNPNETSFRFRLSISNAAVRRPSQSSRSKPL
DLSGPIRCSGRPRVRIRTLSPLDPKKGIHRNFPTSSGVAPAVAAQRQRNSSNRKQPPDQTWCYKDIDRPETWTAALRRWRLQRRRKSTGKWSLERCSHPGKL