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Carg13815 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13815
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCyclin-dependent protein kinase inhibitor SMR4
Genome locationCarg_Chr03:4511331..4511555
RNA-Seq ExpressionCarg13815
SyntenyCarg13815
Gene Ontology termsGO:0006620 - posttranslational protein targeting to endoplasmic reticulum membrane (biological process)
GO:0030433 - ubiquitin-dependent ERAD pathway (biological process)
GO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0072380 - TRC complex (cellular component)
GO:0060090 - molecular adaptor activity (molecular function)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032664.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]3.8e-2378.08Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        MEKTD     NG+ECLTP++ A RIP  SKCPPPPKKKAVTGRK  PPTSGYF PPDLDALFS+PPSSRWEAC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
KAF4373031.1 hypothetical protein F8388_011058 [Cannabis sativa]8.8e-1250.68Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        ME+ +      G +C TP+    RIP    CPPPPKKK+++G K+ PP +GYFHPPDLD+LF +P  SR +AC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
KAG6603646.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]5.1e-36100Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
        MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
KAG7012399.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-1983.33Show/hide
Query:  NECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEA
        NEC+TPRN AFRIPAASKCPP  ++KAV   KQP PTSGYFHPPDLDALFSMPPSSRWEA
Subjt:  NECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEA
KGN54563.2 hypothetical protein Csa_017876 [Cucumis sativus]2.7e-2173.61Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEA
        MEKTD     NG+ECLTP++CA RIP   KCPPPPKKK+ TGRK  PPT GYF PPDLD LFSMPPSSRWEA
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEA
TrEMBL top hitse value%identityAlignment
A0A0A0KXI9 Uncharacterized protein1.2e-2273.97Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        MEKTD     NG+ECLTP++CA RIP   KCPPPPKKK+ TGRK  PPT GYF PPDLD LFSMPPSSRWEAC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
A0A5A7SNA9 Cyclin-dependent protein kinase inhibitor SMR21.9e-2378.08Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        MEKTD     NG+ECLTP++ A RIP  SKCPPPPKKKAVTGRK  PPTSGYF PPDLDALFS+PPSSRWEAC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
A0A7J6H051 Uncharacterized protein4.3e-1250.68Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        ME+ +      G +C TP+    RIP    CPPPPKKK+++G K+ PP +GYFHPPDLD+LF +P  SR +AC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
A0A803QBN7 Uncharacterized protein1.6e-1155.71Show/hide
Query:  RSATN---GNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        RS TN   G +C TP+    RIP    CPPPPKKK+++G K+ PP +GYFHPPDLD+LF +P  SR +AC
Subjt:  RSATN---GNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
B9SZZ7 Uncharacterized protein2.8e-1157.63Show/hide
Query:  GNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRW
        G EC TPR+   RIP    CPPPP+KK+ TG K+ PP +GYF PPDLD L S+PP   W
Subjt:  GNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRW
SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR41.8e-1249.32Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        ME  + ++      C TPR+  +RIP AS CPPPP+KK +  RK+ PP +GYF PPDL+ LF   P  R EAC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR52.6e-0646.55Show/hide
Query:  CLTPRNCAFRIPAASKCPPPPKKKAVT---GRKQPPPTSGYFHPPDLDALFSMPPSSR
        C TP     RIPA   CPPP ++K      G+K+ PP  GYF PPDLD  FS+  +S+
Subjt:  CLTPRNCAFRIPAASKCPPPPKKKAVT---GRKQPPPTSGYFHPPDLDALFSMPPSSR
Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein1.3e-1349.32Show/hide
Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        ME  + ++      C TPR+  +RIP AS CPPPP+KK +  RK+ PP +GYF PPDL+ LF   P  R EAC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACCGATGCGAGATCGGCTACGAACGGCAACGAATGTTTAACGCCGAGGAACTGCGCTTTTAGAATTCCGGCGGCATCCAAATGCCCGCCACCGCCGAAGAA
GAAAGCGGTCACTGGCCGGAAGCAGCCTCCACCGACGAGTGGTTATTTCCACCCTCCCGATCTCGATGCTTTGTTTTCCATGCCGCCTTCATCACGATGGGAAGCTTGTG
TTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGACCGATGCGAGATCGGCTACGAACGGCAACGAATGTTTAACGCCGAGGAACTGCGCTTTTAGAATTCCGGCGGCATCCAAATGCCCGCCACCGCCGAAGAA
GAAAGCGGTCACTGGCCGGAAGCAGCCTCCACCGACGAGTGGTTATTTCCACCCTCCCGATCTCGATGCTTTGTTTTCCATGCCGCCTTCATCACGATGGGAAGCTTGTG
TTTAG
Protein sequenceShow/hide protein sequence
MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV