; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13823 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13823
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionC2H2-type zinc finger family protein
Genome locationCarg_Chr03:4489658..4490119
RNA-Seq ExpressionCarg13823
SyntenyCarg13823
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603640.1 putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma subsp. sororia]4.0e-8399.35Show/hide
Query:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
        MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQID QQHPKTS
Subjt:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS

Query:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
        HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
Subjt:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

KAG7033822.1 putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-84100Show/hide
Query:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
        MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
Subjt:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS

Query:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
        HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
Subjt:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

XP_004142197.1 probable transcriptional regulator RABBIT EARS [Cucumis sativus]4.8e-4451.26Show/hide
Query:  MDSKLCWKIWENKNKKKKNL------------TTTINEA-----SWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK
        M+ K CW +WE K KKKKNL            TTTI  +     SWEEQAFA+D AAG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK
Subjt:  MDSKLCWKIWENKNKKKKNL------------TTTINEA-----SWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK

Query:  HQSFKPQID------PQQH-------------PKTS---------------------------------------------HDFLKDQ--AAVCTKRKR-
        H+SFKPQI+      P  H             PK+S                                             +D L+D+  A  C KRKR 
Subjt:  HQSFKPQID------PQQH-------------PKTS---------------------------------------------HDFLKDQ--AAVCTKRKR-

Query:  PDHVP-STVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
         DH P STVAF+FRSEVIGL+H+SVEDLDLELRLGG R
Subjt:  PDHVP-STVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

XP_022950470.1 transcriptional regulator TAC1-like [Cucurbita moschata]2.8e-84100Show/hide
Query:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
        MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
Subjt:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS

Query:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
        HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
Subjt:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

XP_023544692.1 transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo]4.6e-7993.46Show/hide
Query:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
        MDSK CW +WENKNKKK+NLTT+IN+ASWEE+AFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQID QQHPKTS
Subjt:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS

Query:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
        HDFLKDQAAVCTKRKRPDHVP+T+AFLFRSEVIGLTHTSVEDLDLELRLGGAR
Subjt:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

TrEMBL top hitse value%identityAlignment
A0A0A0KZM8 C2H2-type domain-containing protein2.3e-4451.26Show/hide
Query:  MDSKLCWKIWENKNKKKKNL------------TTTINEA-----SWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK
        M+ K CW +WE K KKKKNL            TTTI  +     SWEEQAFA+D AAG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK
Subjt:  MDSKLCWKIWENKNKKKKNL------------TTTINEA-----SWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK

Query:  HQSFKPQID------PQQH-------------PKTS---------------------------------------------HDFLKDQ--AAVCTKRKR-
        H+SFKPQI+      P  H             PK+S                                             +D L+D+  A  C KRKR 
Subjt:  HQSFKPQID------PQQH-------------PKTS---------------------------------------------HDFLKDQ--AAVCTKRKR-

Query:  PDHVP-STVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
         DH P STVAF+FRSEVIGL+H+SVEDLDLELRLGG R
Subjt:  PDHVP-STVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

A0A1S3BJY1 probable transcriptional regulator RABBIT EARS3.9e-4450.63Show/hide
Query:  MDSKLCWKIWENKNKKKKNL-------------TTTINEA------SWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR
        M+ K CW +WE K KKKKNL             TTTI  +      SWEEQAFA+D AAG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR
Subjt:  MDSKLCWKIWENKNKKKKNL-------------TTTINEA------SWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR

Query:  LKHQSFKPQIDP-------------------QQHPKTS--------------------------------------------HDFLKDQ--AAVCTKRKR
        LKH+SFKPQI+                      +PK+S                                            +D LKD+  A  C KRKR
Subjt:  LKHQSFKPQIDP-------------------QQHPKTS--------------------------------------------HDFLKDQ--AAVCTKRKR

Query:  -PDHVP-STVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
          DH P STVAF FRSEVIGL+H+SVEDLDLELRLGG R
Subjt:  -PDHVP-STVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

A0A5A7STW0 Putative transcriptional regulator RABBIT EARS3.9e-4450.63Show/hide
Query:  MDSKLCWKIWENKNKKKKNL-------------TTTINEA------SWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR
        M+ K CW +WE K KKKKNL             TTTI  +      SWEEQAFA+D AAG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR
Subjt:  MDSKLCWKIWENKNKKKKNL-------------TTTINEA------SWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR

Query:  LKHQSFKPQIDP-------------------QQHPKTS--------------------------------------------HDFLKDQ--AAVCTKRKR
        LKH+SFKPQI+                      +PK+S                                            +D LKD+  A  C KRKR
Subjt:  LKHQSFKPQIDP-------------------QQHPKTS--------------------------------------------HDFLKDQ--AAVCTKRKR

Query:  -PDHVP-STVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
          DH P STVAF FRSEVIGL+H+SVEDLDLELRLGG R
Subjt:  -PDHVP-STVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

A0A6J1EUY7 transcriptional regulator SUPERMAN-like3.7e-4250.92Show/hide
Query:  MDSKLCWKIWENKNK---KKKNLTTTIN----------EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSF
        M+ K CW +WENKN+   K +N  TT +          + SWEEQAFA+D AAG LGGCVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKH+SF
Subjt:  MDSKLCWKIWENKNK---KKKNLTTTIN----------EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSF

Query:  KPQ-----------------IDPQQHPKT-------------------------------------SHDFLKDQAAVCTKRKRPD-HVPSTVAFLFRSEV
        KPQ                 ID  QHP +                                     + D  KD  AVC KRKR D H  STVAF+ RSEV
Subjt:  KPQ-----------------IDPQQHPKT-------------------------------------SHDFLKDQAAVCTKRKRPD-HVPSTVAFLFRSEV

Query:  IGLTHTSVEDLDLELRLG
        IGL+H S+EDLDLELRLG
Subjt:  IGLTHTSVEDLDLELRLG

A0A6J1GFU1 transcriptional regulator TAC1-like1.3e-84100Show/hide
Query:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
        MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
Subjt:  MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS

Query:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
        HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
Subjt:  HDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.1e-1968Show/hide
Query:  EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
        E+SWEE AFAED AAG L    WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRARLK        D    PK+S
Subjt:  EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS

Q38895 Transcriptional regulator SUPERMAN8.2e-1551.72Show/hide
Query:  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQ----SFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHVPSTV
        +L G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+ Q    S      P  +P  S+  + +          P H P T+
Subjt:  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQ----SFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHVPSTV

Q9LHS9 Probable transcriptional regulator RABBIT EARS1.7e-2070.59Show/hide
Query:  EEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHP
        EE+AFA     G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK QS  P    Q  P
Subjt:  EEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHP

Q9SLB8 Zinc finger protein 117.7e-1383.33Show/hide
Query:  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK
        WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+
Subjt:  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK

Q9SR34 Transcriptional regulator TAC15.7e-0832.85Show/hide
Query:  RSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQ-------------------------------------IDPQQHPKTSHDFLKDQAAVCTK
        RSY CSFC R F +AQALGGHMN+HRRDRA+L+ +  +                                       +D    PK   +F   ++ + T 
Subjt:  RSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQ-------------------------------------IDPQQHPKTSHDFLKDQAAVCTK

Query:  RKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLG
            DH   T A +  S      H  +E LDLELRLG
Subjt:  RKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLG

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 107.9e-2168Show/hide
Query:  EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS
        E+SWEE AFAED AAG L    WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRARLK        D    PK+S
Subjt:  EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTS

AT2G42410.1 zinc finger protein 115.5e-1483.33Show/hide
Query:  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK
        WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+
Subjt:  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein5.8e-1651.72Show/hide
Query:  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQ----SFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHVPSTV
        +L G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+ Q    S      P  +P  S+  + +          P H P T+
Subjt:  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQ----SFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHVPSTV

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein6.2e-1867.86Show/hide
Query:  NEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRA
        ++ SWE +AF +D   G++ G  WPPRSY+C+FC+REFRSAQALGGHMNVHRRDRA
Subjt:  NEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRA

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-2170.59Show/hide
Query:  EEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHP
        EE+AFA     G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK QS  P    Q  P
Subjt:  EEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCCAAACTATGCTGGAAGATATGGGAAAACAAGAACAAAAAGAAGAAGAATTTAACCACTACAATCAACGAAGCTTCATGGGAAGAACAAGCCTTTGCTGAGGA
TGCTGCTGCGGGTCATCTCGGCGGCTGCGTTTGGCCCCCCAGATCCTACTCTTGTAGCTTCTGCAAAAGGGAATTCCGGTCGGCTCAAGCTCTGGGTGGTCACATGAATG
TCCACCGCCGTGATCGGGCTAGATTAAAGCACCAATCTTTCAAACCCCAAATCGATCCTCAACAACACCCTAAAACAAGCCATGATTTCCTCAAGGATCAGGCTGCTGTT
TGTACCAAGAGAAAGAGACCCGATCATGTGCCGTCCACGGTGGCTTTCCTTTTCCGATCAGAGGTAATTGGACTTACTCATACCTCCGTTGAGGATTTGGATCTTGAGCT
CCGCCTTGGCGGCGCTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCCAAACTATGCTGGAAGATATGGGAAAACAAGAACAAAAAGAAGAAGAATTTAACCACTACAATCAACGAAGCTTCATGGGAAGAACAAGCCTTTGCTGAGGA
TGCTGCTGCGGGTCATCTCGGCGGCTGCGTTTGGCCCCCCAGATCCTACTCTTGTAGCTTCTGCAAAAGGGAATTCCGGTCGGCTCAAGCTCTGGGTGGTCACATGAATG
TCCACCGCCGTGATCGGGCTAGATTAAAGCACCAATCTTTCAAACCCCAAATCGATCCTCAACAACACCCTAAAACAAGCCATGATTTCCTCAAGGATCAGGCTGCTGTT
TGTACCAAGAGAAAGAGACCCGATCATGTGCCGTCCACGGTGGCTTTCCTTTTCCGATCAGAGGTAATTGGACTTACTCATACCTCCGTTGAGGATTTGGATCTTGAGCT
CCGCCTTGGCGGCGCTAGATAA
Protein sequenceShow/hide protein sequence
MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAV
CTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR