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Carg13830 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13830
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF3245)
Genome locationCarg_Chr08:5165156..5166605
RNA-Seq ExpressionCarg13830
SyntenyCarg13830
Gene Ontology termsNA
InterPro domainsIPR021641 - Protein of unknown function DUF3245


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593666.1 Rop guanine nucleotide exchange factor 3, partial [Cucurbita argyrosperma subsp. sororia]3.9e-7299.31Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMP LWTKKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

KAG7025998.1 hypothetical protein SDJN02_12496 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-73100Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

XP_022964046.1 uncharacterized protein LOC111464189 [Cucurbita moschata]1.9e-7197.92Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        TPV+NNEDDDDNDDE ES+TAMFDKKRAPTRVTMPPLWTKKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

XP_023000602.1 uncharacterized protein LOC111494843 [Cucurbita maxima]2.1e-7097.22Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKS+PPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        T VLNNEDDDDNDDE ESKTAMFDKKRAPTRVTMPP WTKKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

XP_023514247.1 uncharacterized protein LOC111778569 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-7197.92Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEI+KLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        TPVLNNEDDDDNDDE ESKTAMFDKKRAPTRVTMPP WTKKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

TrEMBL top hitse value%identityAlignment
A0A5D3BV19 Putative RNA binding protein3.0e-5479.58Show/hide
Query:  SNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTP
        SNMERPQKSRPPEIIKLNDAAKLAA+LMSKMTN EWKET  DN+ST +EPE RPPRLGLGAK++  FRNGPSNDPLDRKLYAKLDAGKKQAARKM E+TP
Subjt:  SNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTP

Query:  VLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        VL+N+DDD +D+E ES+TA+F+KKRA   VTMPP   KKKRR
Subjt:  VLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

A0A6J1H4P0 uncharacterized protein LOC1114603616.7e-5480.56Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSN+ERPQKSRPPEIIKLNDAAKLAA+LMSKMT  EWKE ANDN+ST+ EP NRPPRLGLGAKI+   RNGPSNDP+DRKLYAKLDA KKQAARK+ ED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        TPVLNNEDDDD++D+ ES+TA+FDKKRA TRV M PL  KKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

A0A6J1HHS0 uncharacterized protein LOC1114641899.3e-7297.92Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        TPV+NNEDDDDNDDE ES+TAMFDKKRAPTRVTMPPLWTKKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

A0A6J1KE33 uncharacterized protein LOC1114948431.0e-7097.22Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKS+PPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        T VLNNEDDDDNDDE ESKTAMFDKKRAPTRVTMPP WTKKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

A0A6J1KYE5 uncharacterized protein LOC1114993312.7e-5580.56Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSN+ERPQKSRPPEIIKLNDAAKLAA+LMSKMT  EWKETANDN+ST+ EP  RPPRLGLGAKI+   RNGPSNDPLDRKLYAKLDA KKQAARK+ ED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR
        TPVL+NE+DDD+DD+ ES+TA+FDKKRA TRV+M PL  KKKRR
Subjt:  TPVLNNEDDDDNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G61370.1 Protein of unknown function (DUF3245)3.9e-1442.06Show/hide
Query:  ERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVLN
        E  +K   P+I K + A KLA + ++ MT    + T +D   T    E RP RLGLGA++S Q +  PS+DPLD+KL AK  A K++ AR + E      
Subjt:  ERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVLN

Query:  NE-DDDDNDDEGESKTAMFDKKRAPT
        N  DD ++DDE ESK+  F KK+  T
Subjt:  NE-DDDDNDDEGESKTAMFDKKRAPT

AT4G07940.1 Protein of unknown function (DUF3245)2.2e-0947.3Show/hide
Query:  RLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVLNNEDDDDND-DEGESKTAMFDKKRAPT
        +LGLGA++S Q +  PS+DPLD+KL AK  AGK++ AR + E      N  DD+ D DE ESK+  F  K+  T
Subjt:  RLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVLNNEDDDDND-DEGESKTAMFDKKRAPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGCAACATGGAAAGGCCGCAGAAATCTAGACCTCCCGAAATTATTAAGTTGAATGACGCAGCGAAATTGGCAGCGGAGTTGATGAGTAAGATGACAAATTGCGA
ATGGAAAGAAACTGCAAATGATAATAAATCAACCGTGGTAGAACCCGAAAATCGACCTCCTAGACTTGGACTTGGAGCCAAAATAAGTAGCCAGTTCAGAAATGGACCTT
CTAATGACCCACTTGATAGAAAATTATATGCCAAGTTGGACGCTGGGAAAAAGCAAGCTGCTAGAAAGATGTTGGAGGATACTCCTGTACTTAACAATGAAGATGACGAC
GACAACGATGATGAGGGAGAGAGTAAAACTGCCATGTTCGATAAGAAGCGAGCACCAACTCGAGTAACTATGCCTCCTTTGTGGACCAAGAAAAAACGAAGGTAG
mRNA sequenceShow/hide mRNA sequence
TTCAGTTTAGAATTCTGCTCAATTAGTTCTGAAAACCCTTATTTCGGATCGTTTGGATTTTTAGCGCCCCGAAAATTCGTTACTGGCCTCTTACTCGGGTACTCGTGCGC
TGTATTGTTTGATTATTGTACGATTTTTTTGCTAAATAAATGTGGAGTTGATTAAGTAGCCCACTGAAAATTCTAGTGAGATTATTTAGGGTTGCAGTGTGTATTTTGGA
TTCTTGATATGATATTAGAAAACGTAGGGGCGTTTCATTCCGTGACGGTTGTTAAGTTCAAAATTCCTGCAGAAATCCTTACAATTTCATCGTAGATTGCCTGATTATTT
GCAGTATAGCGGTCTTGAAGTTGCAGCAGCAAGGTCAATGAGTAGCAACATGGAAAGGCCGCAGAAATCTAGACCTCCCGAAATTATTAAGTTGAATGACGCAGCGAAAT
TGGCAGCGGAGTTGATGAGTAAGATGACAAATTGCGAATGGAAAGAAACTGCAAATGATAATAAATCAACCGTGGTAGAACCCGAAAATCGACCTCCTAGACTTGGACTT
GGAGCCAAAATAAGTAGCCAGTTCAGAAATGGACCTTCTAATGACCCACTTGATAGAAAATTATATGCCAAGTTGGACGCTGGGAAAAAGCAAGCTGCTAGAAAGATGTT
GGAGGATACTCCTGTACTTAACAATGAAGATGACGACGACAACGATGATGAGGGAGAGAGTAAAACTGCCATGTTCGATAAGAAGCGAGCACCAACTCGAGTAACTATGC
CTCCTTTGTGGACCAAGAAAAAACGAAGGTAGTTTATTTTTGTAGGTAGGGAATGTTCTTGATTATCAAACCAGTTGTCTGATAGTTAAAAATGATAGAACATAACATCT
TATTTGGTCTTAGACAAGAGGGTATTTGATTTAGAAGGTAGTTTGTTCATTTATTGTGAGATCCTACGTCGGTTATAGAGAAGAACGAAGAAGTTCGAAAGAGAAAGTCC
AAAGAGAACAATATCTGCTAGTGGTGGGCTTGGGTCGTTACATTTATGTTGGTATGATTGAACTTGTTAGGGCATCTTTTG
Protein sequenceShow/hide protein sequence
MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVLNNEDDD
DNDDEGESKTAMFDKKRAPTRVTMPPLWTKKKRR