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Carg13860 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13860
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAMP-binding domain-containing protein
Genome locationCarg_Chr08:4949328..4950310
RNA-Seq ExpressionCarg13860
SyntenyCarg13860
Gene Ontology termsNA
InterPro domainsIPR000873 - AMP-dependent synthetase/ligase
IPR042099 - ANL, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593626.1 Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.2e-5596.4Show/hide
Query:  WRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQALVVDNPELFNRIIETFRSKASMRCIILLWGEN
        W + AERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQALVVDNPELFNRIIETFRSKASMRCIILLWGEN
Subjt:  WRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQALVVDNPELFNRIIETFRSKASMRCIILLWGEN

Query:  SSLAAEGLDGI
        SSLAAEGLD I
Subjt:  SSLAAEGLDGI

KAG7025968.1 Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-91100Show/hide
Query:  MGVAVPFTHGFLPFLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIAL
        MGVAVPFTHGFLPFLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIAL
Subjt:  MGVAVPFTHGFLPFLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIAL

Query:  FSDNSCRWLVADQALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGYGMRES
        FSDNSCRWLVADQALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGYGMRES
Subjt:  FSDNSCRWLVADQALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGYGMRES

XP_022958899.1 probable acyl-activating enzyme 16, chloroplastic isoform X2 [Cucurbita moschata]4.1e-4959.04Show/hide
Query:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS
        H  LP    L +R    L+  S        V    + VPDIWR SAERYGDRVAL+DPYHNPASK+TYK+LEQSILNF EGLRAIGIKPDEKIALF+DNS
Subjt:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS

Query:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY
        CRWLVADQ                               ALVVDNPELFNRI+ETF  KASMRC+ILLWGE SSLA EG+DGI    Y
Subjt:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY

XP_023006518.1 probable acyl-activating enzyme 16, chloroplastic isoform X2 [Cucurbita maxima]4.1e-4959.04Show/hide
Query:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS
        H  LP    L +R    L+  S        V    + VPDIWR SAERYGDRVAL+DPYHNPASK+TYK+LEQSILNF EGLRAIGIKPDEKIALF+DNS
Subjt:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS

Query:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY
        CRWLVADQ                               ALVVDNPELFNRI+ETF  KASMRC+ILLWGE SSLA EG+DGI    Y
Subjt:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY

XP_023548746.1 probable acyl-activating enzyme 16, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]5.4e-4959.04Show/hide
Query:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS
        H  LP    L +R    L+  S        V    + VPDIWR SAERYGDRVAL+DPYHNPASK+TYK+LEQSILNF EGLRAIGIKPDEKIALF+DNS
Subjt:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS

Query:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY
        CRWLVADQ                               ALVVDNPELFNRI+ETF  KASMRC+ILLWGE SSLA EG+DGI    Y
Subjt:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY

TrEMBL top hitse value%identityAlignment
A0A5D3CUE6 Putative acyl-activating enzyme 166.4e-4860.34Show/hide
Query:  LVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-
        L +R    L+  S        V    + VPDIWR SAERYGDR+AL+DPYHNPASK+TYK+LEQSILNF EGLRAIGIKPDEKIALF+DNSCRWLVADQ 
Subjt:  LVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-

Query:  ------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGI
                                      ALVVDNPELFNRI+ETF  KASMRC+ILLWGE SSLA EG+D I
Subjt:  ------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGI

A0A6J1H4D5 probable acyl-activating enzyme 16, chloroplastic isoform X13.4e-4960.34Show/hide
Query:  LVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-
        L +R    L+  S        V    + VPDIWR SAERYGDRVAL+DPYHNPASK+TYK+LEQSILNF EGLRAIGIKPDEKIALF+DNSCRWLVADQ 
Subjt:  LVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-

Query:  ------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY
                                      ALVVDNPELFNRI+ETF  KASMRC+ILLWGE SSLA EG+DGI    Y
Subjt:  ------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY

A0A6J1H6F8 probable acyl-activating enzyme 16, chloroplastic isoform X22.0e-4959.04Show/hide
Query:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS
        H  LP    L +R    L+  S        V    + VPDIWR SAERYGDRVAL+DPYHNPASK+TYK+LEQSILNF EGLRAIGIKPDEKIALF+DNS
Subjt:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS

Query:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY
        CRWLVADQ                               ALVVDNPELFNRI+ETF  KASMRC+ILLWGE SSLA EG+DGI    Y
Subjt:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY

A0A6J1KW26 probable acyl-activating enzyme 16, chloroplastic isoform X13.4e-4960.34Show/hide
Query:  LVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-
        L +R    L+  S        V    + VPDIWR SAERYGDRVAL+DPYHNPASK+TYK+LEQSILNF EGLRAIGIKPDEKIALF+DNSCRWLVADQ 
Subjt:  LVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-

Query:  ------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY
                                      ALVVDNPELFNRI+ETF  KASMRC+ILLWGE SSLA EG+DGI    Y
Subjt:  ------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY

A0A6J1L552 probable acyl-activating enzyme 16, chloroplastic isoform X22.0e-4959.04Show/hide
Query:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS
        H  LP    L +R    L+  S        V    + VPDIWR SAERYGDRVAL+DPYHNPASK+TYK+LEQSILNF EGLRAIGIKPDEKIALF+DNS
Subjt:  HGFLP---FLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNS

Query:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY
        CRWLVADQ                               ALVVDNPELFNRI+ETF  KASMRC+ILLWGE SSLA EG+DGI    Y
Subjt:  CRWLVADQ-------------------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGY

SwissProt top hitse value%identityAlignment
Q70LM7 Linear gramicidin synthase subunit A5.5e-0426.8Show/hide
Query:  KEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQALV
        +E L L+ L    +R    +++    ++    E   D VA++D        +TYKQL +        LR  G+KPD+++A+  D S   +V+  A++
Subjt:  KEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQALV

Q8W471 Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic1.9e-4158.04Show/hide
Query:  VPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-----------------------------
        VPDIWR SAE+YGDRVAL+DPYH+P  K+TYKQLEQ IL+F EGLR +G+K DEKIALF+DNSCRWLV+DQ                             
Subjt:  VPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-----------------------------

Query:  --ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGL
          A+VVDNPE FNRI E+F SKAS+R +ILLWGE SSL  +G+
Subjt:  --ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGL

Q9LK39 Probable acyl-activating enzyme 16, chloroplastic6.8e-3952.8Show/hide
Query:  LESLANRREREVGVME-ELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ----------
        LE L+  RE  +   E + VPDIWR S E+YGDRVA++DPYH+P S  TY+QLEQ IL+F EGLR +G+K DEKIALF+DNSCRWLVADQ          
Subjt:  LESLANRREREVGVME-ELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ----------

Query:  ---------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEG
                             ALVVDNPE FNRI E+F  KA+ + +ILLWGE SSL   G
Subjt:  ---------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEG

Arabidopsis top hitse value%identityAlignment
AT3G23790.1 AMP-dependent synthetase and ligase family protein4.9e-4052.8Show/hide
Query:  LESLANRREREVGVME-ELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ----------
        LE L+  RE  +   E + VPDIWR S E+YGDRVA++DPYH+P S  TY+QLEQ IL+F EGLR +G+K DEKIALF+DNSCRWLVADQ          
Subjt:  LESLANRREREVGVME-ELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ----------

Query:  ---------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEG
                             ALVVDNPE FNRI E+F  KA+ + +ILLWGE SSL   G
Subjt:  ---------------------ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEG

AT4G11030.1 AMP-dependent synthetase and ligase family protein2.5e-0429.33Show/hide
Query:  DIWRFSAERYGDRVAL--LDPYHNPASKI---TYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQA
        DI+R + E+Y +   L   +  +  A K    TYK++   ++     LR+ GIK  EK  ++  N C W+++ +A
Subjt:  DIWRFSAERYGDRVAL--LDPYHNPASKI---TYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQA

AT4G14070.1 acyl-activating enzyme 151.4e-4258.04Show/hide
Query:  VPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-----------------------------
        VPDIWR SAE+YGDRVAL+DPYH+P  K+TYKQLEQ IL+F EGLR +G+K DEKIALF+DNSCRWLV+DQ                             
Subjt:  VPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLVADQ-----------------------------

Query:  --ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGL
          A+VVDNPE FNRI E+F SKAS+R +ILLWGE SSL  +G+
Subjt:  --ALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGTGGCGGTTCCTTTTACTCATGGATTTCTACCATTTCTGGTCATTCGCTCCAAAGAAGCCCTGATTTTGGAATCTCTTGCCAATCGAAGAGAGAGAGAGGTTGG
AGTTATGGAGGAATTAGTTCCTGATATTTGGAGGTTTTCAGCGGAGAGGTATGGCGATCGGGTAGCGTTGCTGGATCCATACCATAATCCTGCTTCCAAGATTACTTATA
AACAGCTAGAACAAAGTATCTTGAATTTCTGTGAAGGTCTTAGGGCCATTGGAATAAAGCCAGATGAAAAGATTGCACTCTTTTCTGATAATTCATGCCGATGGCTTGTT
GCCGATCAAGCATTAGTTGTAGACAACCCTGAATTGTTCAATCGAATCATTGAAACATTCCGTTCGAAGGCATCCATGAGATGTATCATTCTTCTATGGGGCGAAAACTC
AAGCCTGGCAGCTGAGGGACTGGACGGTATTGGACATCATGGATATGGGATGAGAGAGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGTGGCGGTTCCTTTTACTCATGGATTTCTACCATTTCTGGTCATTCGCTCCAAAGAAGCCCTGATTTTGGAATCTCTTGCCAATCGAAGAGAGAGAGAGGTTGG
AGTTATGGAGGAATTAGTTCCTGATATTTGGAGGTTTTCAGCGGAGAGGTATGGCGATCGGGTAGCGTTGCTGGATCCATACCATAATCCTGCTTCCAAGATTACTTATA
AACAGCTAGAACAAAGTATCTTGAATTTCTGTGAAGGTCTTAGGGCCATTGGAATAAAGCCAGATGAAAAGATTGCACTCTTTTCTGATAATTCATGCCGATGGCTTGTT
GCCGATCAAGCATTAGTTGTAGACAACCCTGAATTGTTCAATCGAATCATTGAAACATTCCGTTCGAAGGCATCCATGAGATGTATCATTCTTCTATGGGGCGAAAACTC
AAGCCTGGCAGCTGAGGGACTGGACGGTATTGGACATCATGGATATGGGATGAGAGAGTCGTAA
Protein sequenceShow/hide protein sequence
MGVAVPFTHGFLPFLVIRSKEALILESLANRREREVGVMEELVPDIWRFSAERYGDRVALLDPYHNPASKITYKQLEQSILNFCEGLRAIGIKPDEKIALFSDNSCRWLV
ADQALVVDNPELFNRIIETFRSKASMRCIILLWGENSSLAAEGLDGIGHHGYGMRES