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Carg13871 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13871
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionZinc finger, FYVE/PHD-type
Genome locationCarg_Chr08:4824389..4825002
RNA-Seq ExpressionCarg13871
SyntenyCarg13871
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022964360.1 uncharacterized protein LOC111464393 [Cucurbita moschata]1.4e-67100Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGT
        MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGT
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGT

Query:  AGGVPSPKPTTRRYKLLKDVMC
        AGGVPSPKPTTRRYKLLKDVMC
Subjt:  AGGVPSPKPTTRRYKLLKDVMC

XP_023000074.1 uncharacterized protein LOC111494376 [Cucurbita maxima]1.8e-6597.56Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTS-SSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHG
        MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTS SSSRSHGTSSK+PPPTGERIKQHHEDASSSVGEKGKHG
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTS-SSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHG

Query:  TAGGVPSPKPTTRRYKLLKDVMC
        TAGGVPSP+PTTRRYKLLKDVMC
Subjt:  TAGGVPSPKPTTRRYKLLKDVMC

XP_023514313.1 uncharacterized protein LOC111778615 [Cucurbita pepo subsp. pepo]7.1e-6799.18Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGT
        MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT ERIKQHHEDASSSVGEKGKHGT
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGT

Query:  AGGVPSPKPTTRRYKLLKDVMC
        AGGVPSPKPTTRRYKLLKDVMC
Subjt:  AGGVPSPKPTTRRYKLLKDVMC

XP_023548605.1 uncharacterized protein LOC111807219 [Cucurbita pepo subsp. pepo]9.0e-4667.65Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT--------------GERIKQHHE
        MVD+QIVCC+CGD+GFPDKLFRC  C  RFQHSYCSNYY+E   A+PI+VCDWC+CEGR  SSSRSHGTSS+RPPPT              G++IK HHE
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT--------------GERIKQHHE

Query:  DASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC
        DA+++  +KGK G AG VPSP+PTTRRYKLLKDVMC
Subjt:  DASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC

XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]9.0e-4668.38Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT--------------GERIKQHHE
        MVD+QIVCCMCGDIGFPDKLFRCN C  RFQHSYCSNYY+E   A+PI+VCDWC+CEGRT  SSRSHG+SS+RPP T              GE+IK HH+
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT--------------GERIKQHHE

Query:  DASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC
        D+++++ EKGKHG AG  PSP+PTTRRYKLLKDVMC
Subjt:  DASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A1S3CSH8 uncharacterized protein LOC1035044131.0e-4266.67Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHG-TSSKRPPPTG---------------ERIKQH
        MVD+QIVCCMCGDIGFPDKLF CN CR RFQHSYCSNYY+E   A+PI+VCDWC+CEGR S+SSRSHG +SS+RPP TG               + IK H
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHG-TSSKRPPPTG---------------ERIKQH

Query:  HEDASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC
        H+D+ +   EKGKHG AG  PSP+PTTRRYKLLKDVMC
Subjt:  HEDASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC

A0A6J1H4E1 uncharacterized protein LOC1114603014.1e-4466.91Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT--------------GERIKQHHE
        MVD+QIVCC+CGD+GFPDKLFRC  C  RFQHSYCSNYY+E   A+PI+VCDWC+CEGR  SSSRSHGTSS+RPPPT              G++IK HHE
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT--------------GERIKQHHE

Query:  DASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC
        D++++V +KGK G AG V SP+PTTRRYKLLKDVMC
Subjt:  DASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC

A0A6J1HKK7 uncharacterized protein LOC1114643936.9e-68100Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGT
        MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGT
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGT

Query:  AGGVPSPKPTTRRYKLLKDVMC
        AGGVPSPKPTTRRYKLLKDVMC
Subjt:  AGGVPSPKPTTRRYKLLKDVMC

A0A6J1KIW2 uncharacterized protein LOC1114943768.5e-6697.56Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTS-SSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHG
        MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTS SSSRSHGTSSK+PPPTGERIKQHHEDASSSVGEKGKHG
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTS-SSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHG

Query:  TAGGVPSPKPTTRRYKLLKDVMC
        TAGGVPSP+PTTRRYKLLKDVMC
Subjt:  TAGGVPSPKPTTRRYKLLKDVMC

A0A6J1L0S8 uncharacterized protein LOC1114993266.3e-4567.65Show/hide
Query:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT--------------GERIKQHHE
        MVD+QIVCC+CGD+GFPDKLFRC  C  RFQHSYCSNYY+E   A+PI+VCDWC+CEGR  SSSRSHGTSS+RPPPT              G++IK HHE
Subjt:  MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT--------------GERIKQHHE

Query:  DASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC
        DA+++V +KGK G AG  PSP+PTTRRYKLLKDVMC
Subjt:  DASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein3.0e-3152.27Show/hide
Query:  VCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT----------------GERIKQHHEDASS
        VCCMCGD+GF DKLF C HCR RFQHSYCSNYY +   A+P ++CDWCR + R  S+   HG SS + P +                G RIK H+ +   
Subjt:  VCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPT----------------GERIKQHHEDASS

Query:  SVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC
         V  KG  G  GGV SPK  TRRYKLLKDVMC
Subjt:  SVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC

AT3G60520.1 unknown protein7.4e-3054.07Show/hide
Query:  MVDVQ-IVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCE--GRTSSSSRSHGTSSKRP-----PPTGERIKQH--HEDASS
        MVD++  VCCMCGD+GF DKLF C+ C  RFQHSYCS+YY E  +ADPI++CDWC+CE   RT +    +G SSKR           +IKQ   ++  SS
Subjt:  MVDVQ-IVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCE--GRTSSSSRSHGTSSKRP-----PPTGERIKQH--HEDASS

Query:  SV---GEKGKHGTAGGVPSPKPTTRRYKLLKDVMC
        S+    +KGK     GVPSP+P TRRYKLLKDVMC
Subjt:  SV---GEKGKHGTAGGVPSPKPTTRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATGTTCAAATTGTTTGCTGCATGTGCGGCGACATCGGCTTCCCTGACAAGCTCTTCCGCTGCAACCACTGCCGCACCCGATTTCAACATTCCTATTGCAGTAA
TTACTACACTGAATTGGGTCGCGCCGACCCAATTCAGGTCTGTGATTGGTGCCGGTGTGAAGGTCGTACTTCCTCCTCCTCCAGATCACATGGAACCTCCTCCAAGAGAC
CGCCGCCCACCGGTGAGAGAATCAAGCAACACCATGAAGATGCCTCCTCCTCCGTTGGTGAGAAGGGGAAACACGGCACCGCGGGTGGCGTTCCGTCGCCCAAGCCCACC
ACACGCAGGTACAAGCTTCTGAAGGACGTAATGTGCTGA
mRNA sequenceShow/hide mRNA sequence
TTGCTGGGTCGCATCTTGATTTCATTTTAGAAGCATGGTGGATGTTCAAATTGTTTGCTGCATGTGCGGCGACATCGGCTTCCCTGACAAGCTCTTCCGCTGCAACCACT
GCCGCACCCGATTTCAACATTCCTATTGCAGTAATTACTACACTGAATTGGGTCGCGCCGACCCAATTCAGGTCTGTGATTGGTGCCGGTGTGAAGGTCGTACTTCCTCC
TCCTCCAGATCACATGGAACCTCCTCCAAGAGACCGCCGCCCACCGGTGAGAGAATCAAGCAACACCATGAAGATGCCTCCTCCTCCGTTGGTGAGAAGGGGAAACACGG
CACCGCGGGTGGCGTTCCGTCGCCCAAGCCCACCACACGCAGGTACAAGCTTCTGAAGGACGTAATGTGCTGAAAAAGAGGGCGGTGAATGGGGTTCCTTTAATTTTCTC
AAATCTTAAATATTATTATATAGACATCGTATATATAATATTATAGTTTATAATATAGGTTGCTTTTGAGTGTGCGTGGGTTTATATTGTCTTATT
Protein sequenceShow/hide protein sequence
MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTGERIKQHHEDASSSVGEKGKHGTAGGVPSPKPT
TRRYKLLKDVMC