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Carg13878 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13878
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncytochrome b5-like
Genome locationCarg_Chr08:4756415..4757408
RNA-Seq ExpressionCarg13878
SyntenyCarg13878
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593603.1 Cycloartenol synthase, partial [Cucurbita argyrosperma subsp. sororia]3.4e-6498.41Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSKLFTFDEVAKHNHEKDCWLIISG+VYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPH+PT
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
        PSLLSFSPLHVLIPLLLLVLAFAFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

KAG7025950.1 Cytochrome b5 isoform E [Cucurbita argyrosperma subsp. argyrosperma]3.1e-65100Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
        PSLLSFSPLHVLIPLLLLVLAFAFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

XP_022964486.1 cytochrome b5-like [Cucurbita moschata]5.4e-6294.44Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSK++TFDEVAKHNHEKDCWLIISG+VYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSE+A+E MKKYQIGKIDPLTLPTEQKHVETTPH+PT
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
        PSLLSFSPLHVLIPLLLLVLAFAFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

XP_023000205.1 cytochrome b5-like [Cucurbita maxima]1.3e-6092.86Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSK++TF+EVAKHNHEKDCWLIISGYVYDVTSYLPDHPGG ELLVL VEKDATFDFKSVGHSETA+EMMKKYQIGKIDPLTLPTEQK+VETTP++PT
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
        PSLLSFSPLHVLIPLLLLVLAFAFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

XP_023515254.1 cytochrome b5-like [Cucurbita pepo subsp. pepo]2.7e-6194.44Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSK++TFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQE MKKYQIGKIDPLTLPTEQKHVETTPH+PT
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
         SLLSFSPLHVLIPLLL VLA AFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

TrEMBL top hitse value%identityAlignment
A0A0A0KA20 Cytochrome b5 heme-binding domain-containing protein4.0e-5077.78Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSK+++FDEVAKHN +KDCWLIISGYVYDVTS+LPDHPGG ELL+LAVEKDATFDFKSVGHSE A E MK YQIGKID  TLP +QK+VE+ P++ T
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
        PSL SFSP+H+L+P+LLL LAFAFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

A0A1S3CAE5 cytochrome b51.5e-5280.16Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSK+++FDEVAKHNH+KDCWLIISGYVYDVTS+LPDHPGG ELL+LAVEKDATFDFKSVGHSE AQE MK Y+IGKID  TLP +Q +VE+TP++PT
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
        PSL SFSP+HVL+P+LLL LAFAFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

A0A6J1HJ10 cytochrome b5-like2.6e-6294.44Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSK++TFDEVAKHNHEKDCWLIISG+VYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSE+A+E MKKYQIGKIDPLTLPTEQKHVETTPH+PT
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
        PSLLSFSPLHVLIPLLLLVLAFAFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

A0A6J1KHQ2 cytochrome b5-like6.5e-6192.86Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        MDSNSK++TF+EVAKHNHEKDCWLIISGYVYDVTSYLPDHPGG ELLVL VEKDATFDFKSVGHSETA+EMMKKYQIGKIDPLTLPTEQK+VETTP++PT
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSPLHVLIPLLLLVLAFAFPY
        PSLLSFSPLHVLIPLLLLVLAFAFPY
Subjt:  PSLLSFSPLHVLIPLLLLVLAFAFPY

W9RDL9 Cytochrome b5, seed isoform5.9e-3055.38Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        M  +SK+F FDEVAKHNH+KDCW+IISG VY+VT +L +HPGG E+L+LA EKDAT DF+ VGHS+TA+EMM+KY +GK+D  TLP E+   +  P  P+
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLL----SFSPLHVLIPLLLLVLAFAFPY
         S      S   L  L+PLL+L +AFA  +
Subjt:  PSLL----SFSPLHVLIPLLLLVLAFAFPY

SwissProt top hitse value%identityAlignment
O48845 Cytochrome b5 isoform B2.5e-2546.03Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-
        M   +K+FT  EV++HN   DCW++I+G VY+VT +L DHPGG ++L+ +  KDAT DF+ VGHSE+A+EMM++Y +G+IDP T+P + K+  T P +P 
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-

Query:  ----TPSLLSFSPLHVLIPLLLLVLA
              S      L  L+PL +L LA
Subjt:  ----TPSLLSFSPLHVLIPLLLLVLA

P40934 Cytochrome b56.5e-2648.8Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTP----
        M S  K+  F+EV++HN  KDCWLIISG VYDVT ++ DHPGG E+L+ +  KDAT DF+ VGHS+TA++MM+KY IG+ID  T+P  + +V        
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTP----

Query:  HEPTPSLLSFSPLHVLIPLLLLVLA
         + TP  +    L  L+P+L+L LA
Subjt:  HEPTPSLLSFSPLHVLIPLLLLVLA

P49098 Cytochrome b55.0e-2646.56Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-
        M   +K+FT  EV++HN+ KDCWL+ISG VYDVT +L DHPGG E+L+ A  KDAT DF+ VGHS +A+ M+ +Y +G ID  T+PT+ K+  T P++P 
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-

Query:  ----TPSLLSFSPLHVLIPLLLLVLAFAFPY
              S      L  L+PL++L +AF   +
Subjt:  ----TPSLLSFSPLHVLIPLLLLVLAFAFPY

P49099 Cytochrome b5, seed isoform6.5e-2648.8Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHV-ETTPHEP
        M   SK+FT  EV+ HN+ KDCWLIISG VY+VT +L DHPGGGE+L+ A  KDAT DF+ +GHS +A+ M+ +Y +G ID  T+PT+ K+     PH  
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHV-ETTPHEP

Query:  TPSLLSF--SPLHVLIPLLLLVLAF
              F    L  L+PL++L +AF
Subjt:  TPSLLSF--SPLHVLIPLLLLVLAF

Q42342 Cytochrome b5 isoform E2.2e-2649.61Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-
        M S+ K+ +F+EV+KHN  KDCWLIISG VYDVT ++ DHPGG E+L+ +  KDAT DF+ VGHS+TA++MM KY IG+ID  ++P  + +V   P +P 
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-

Query:  -----TPSLLSFSPLHVLIPLLLLVLA
             TP  +    L  L+P+L+L LA
Subjt:  -----TPSLLSFSPLHVLIPLLLLVLA

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A7.7e-2238.1Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLP--TEQK-HVETTPH
        M + +KL++ +E A HN + DCW++I G VYDV+SY+ +HPGG ++L+    KDAT DF+  GHS+ A+E+M+KY IG++D  +LP   E K + +  P 
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLP--TEQK-HVETTPH

Query:  EPTPSLLSFSPLHVLIPLLLLVLAFA
        +    L   +  + ++P+ ++ ++ A
Subjt:  EPTPSLLSFSPLHVLIPLLLLVLAFA

AT2G32720.1 cytochrome B5 isoform B1.8e-2646.03Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-
        M   +K+FT  EV++HN   DCW++I+G VY+VT +L DHPGG ++L+ +  KDAT DF+ VGHSE+A+EMM++Y +G+IDP T+P + K+  T P +P 
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-

Query:  ----TPSLLSFSPLHVLIPLLLLVLA
              S      L  L+PL +L LA
Subjt:  ----TPSLLSFSPLHVLIPLLLLVLA

AT2G46650.1 cytochrome B5 isoform C2.4e-2341.73Show/hide
Query:  SKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHV-----ETTPHEP
        + L +F +VAKH  + DCW++I G VYD+++++ +HPGG  +L+    KDA+ DF+ V HS+ A+E+MKKY IG +D  T+P  Q+++     E+T  E 
Subjt:  SKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHV-----ETTPHEP

Query:  TPSLLSFSPLHVLIPLLLLVLAFAFPY
        T        L  LIPLL+L +AFA  +
Subjt:  TPSLLSFSPLHVLIPLLLLVLAFAFPY

AT5G48810.1 cytochrome B5 isoform D1.1e-2544.27Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT
        M  + K+FT  EV++H+  KDCW++I G VYDVT +L DHPGG E+++ +  KDAT DF+ VGHS TA+ M+ +Y +G ID  T+P + K V  T  +  
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPT

Query:  PSLLSFSP-----LHVLIPLLLLVLAFAFPY
         +    S      L  L+PLL+L LAF   Y
Subjt:  PSLLSFSP-----LHVLIPLLLLVLAFAFPY

AT5G53560.1 cytochrome B5 isoform E1.6e-2749.61Show/hide
Query:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-
        M S+ K+ +F+EV+KHN  KDCWLIISG VYDVT ++ DHPGG E+L+ +  KDAT DF+ VGHS+TA++MM KY IG+ID  ++P  + +V   P +P 
Subjt:  MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEP-

Query:  -----TPSLLSFSPLHVLIPLLLLVLA
             TP  +    L  L+P+L+L LA
Subjt:  -----TPSLLSFSPLHVLIPLLLLVLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAAATTCTAAACTCTTTACTTTCGATGAAGTTGCAAAGCACAACCACGAGAAAGATTGTTGGCTTATCATCTCTGGTTATGTGTATGATGTAACTTCTTATTT
ACCGGACCACCCAGGTGGCGGTGAGCTTTTGGTATTGGCTGTGGAAAAAGACGCGACATTTGATTTTAAGAGTGTTGGACATAGTGAAACAGCTCAAGAGATGATGAAAA
AGTATCAGATAGGTAAAATCGACCCGTTGACTCTCCCGACAGAACAAAAACATGTGGAAACTACTCCACACGAACCAACTCCGAGCCTACTTTCCTTTTCGCCTTTACAT
GTTCTAATTCCTCTATTGCTCTTGGTCTTGGCTTTTGCTTTTCCCTATTGA
mRNA sequenceShow/hide mRNA sequence
TTTTCTCTTCTTCTTCTTCCTCTTCGTATATTTATCGTCCCAAATTTGGTTAGGTACGGTTCCCACAAATGGATTCAAATTCTAAACTCTTTACTTTCGATGAAGTTGCA
AAGCACAACCACGAGAAAGATTGTTGGCTTATCATCTCTGGTTATGTGTATGATGTAACTTCTTATTTACCGGACCACCCAGGTGGCGGTGAGCTTTTGGTATTGGCTGT
GGAAAAAGACGCGACATTTGATTTTAAGAGTGTTGGACATAGTGAAACAGCTCAAGAGATGATGAAAAAGTATCAGATAGGTAAAATCGACCCGTTGACTCTCCCGACAG
AACAAAAACATGTGGAAACTACTCCACACGAACCAACTCCGAGCCTACTTTCCTTTTCGCCTTTACATGTTCTAATTCCTCTATTGCTCTTGGTCTTGGCTTTTGCTTTT
CCCTATTGAAAAATTAAGGCCTACAAATAAAACTCTATTGGGGTGGATTAAGAATTTGAAGCTTCAATTCAATATCGATGATCATCGAGTTTGTACCATCTTTTTATTCG
CCATTATTAGTATCGTTTAAGGTTGGATTCATACTTTTTTCATATGAATTTGTAATATATGGATAAGAT
Protein sequenceShow/hide protein sequence
MDSNSKLFTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQEMMKKYQIGKIDPLTLPTEQKHVETTPHEPTPSLLSFSPLH
VLIPLLLLVLAFAFPY