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Carg13890 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13890
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP synthase subunit epsilon, mitochondrial-like
Genome locationCarg_Chr08:4658116..4660924
RNA-Seq ExpressionCarg13890
SyntenyCarg13890
Gene Ontology termsGO:0042776 - mitochondrial ATP synthesis coupled proton transport (biological process)
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR006721 - ATP synthase, F1 complex, epsilon subunit, mitochondrial
IPR036742 - ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025938.1 ATP synthase subunit epsilon, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-33100Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

XP_012078426.1 ATP synthase subunit epsilon, mitochondrial [Jatropha curcas]2.3e-3092.86Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYK+EVL+REKVHFSISKWTDGKPQKP IRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

XP_022954407.1 ATP synthase subunit epsilon, mitochondrial [Cucurbita moschata]3.1e-3094.29Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKW DGKPQKPIIRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

XP_022964126.1 ATP synthase subunit epsilon, mitochondrial-like [Cucurbita moschata]2.5e-3298.57Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKW DGKPQKPIIRSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

XP_023000286.1 ATP synthase subunit epsilon, mitochondrial-like [Cucurbita maxima]3.3e-3297.14Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKW DGKPQKPI+RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

TrEMBL top hitse value%identityAlignment
A0A5D2IKB8 Uncharacterized protein2.5e-3092.75Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYKTE LSREKVHFSISKWTDGKP+KP IRSD+PE
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE

A0A6J1GQX0 ATP synthase subunit epsilon, mitochondrial1.5e-3094.29Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKW DGKPQKPIIRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

A0A6J1HI26 ATP synthase subunit epsilon, mitochondrial-like1.2e-3298.57Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKW DGKPQKPIIRSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

A0A6J1JZ99 ATP synthase subunit epsilon, mitochondrial1.5e-3094.29Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKW DGKPQKPIIRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

A0A6J1KFG7 ATP synthase subunit epsilon, mitochondrial-like1.6e-3297.14Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKW DGKPQKPI+RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA

SwissProt top hitse value%identityAlignment
Q06450 ATP synthase subunit epsilon, mitochondrial1.2e-2984.06Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE
        MASNAAVPFWRAAGMTYITYSN+CAN+VRNCLK+PY+ E LSREKVHFS SKW DGKPQKP IRSD  E
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE

Q41898 ATP synthase subunit epsilon, mitochondrial6.8e-2573.53Show/hide
Query:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE
        A+ AAVPFWRAAGMTYI YSNICA LVRNCLK+P+K+E  SREKVHFSISKWTDGK +KP +R+++ +
Subjt:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE

Q75JK6 ATP synthase subunit epsilon, mitochondrial7.6e-0843.64Show/hide
Query:  FWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPII
        +WRAAG+TY+ Y+NIC   VRNCLK+P++    +RE    +   + +GK    II
Subjt:  FWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPII

Q96253 ATP synthase subunit epsilon, mitochondrial2.4e-3082.61Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLK+P+K E L+REKVHFS+SKW DGKPQKP++RSD PE
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE

Q9VXN2 Protein stunted2.9e-0739.66Show/hide
Query:  WRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDN
        WRAAG+TYI YSNI A ++R  LK   + +   R+  H   + W +GKP +   +S++
Subjt:  WRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDN

Arabidopsis top hitse value%identityAlignment
AT1G51650.1 ATP synthase epsilon chain, mitochondrial1.7e-3182.61Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLK+P+K E L+REKVHFS+SKW DGKPQKP++RSD PE
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGAATGCAGCAGTGCCCTTTTGGAGAGCGGCGGGGATGACATACATCACCTACTCTAACATTTGCGCCAATCTGGTCAGGAACTGTCTCAAGGATCCTTACAA
AACGGAGGTTCTCAGCCGCGAGAAGGTTCATTTTTCCATTTCCAAGTGGACGGACGGCAAGCCCCAAAAGCCAATTATTCGGTCGGATAATCCTGAAGCGTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAGAGAGGAAGAAAGTTGCAGAGAAATGGCTTCGAATGCAGCAGTGCCCTTTTGGAGAGCGGCGGGGATGACATACATCACCTACTCTAACATTTGCGCCAATCT
GGTCAGGAACTGTCTCAAGGATCCTTACAAAACGGAGGTTCTCAGCCGCGAGAAGGTTCATTTTTCCATTTCCAAGTGGACGGACGGCAAGCCCCAAAAGCCAATTATTC
GGTCGGATAATCCTGAAGCGTGAAGGTCGGGAGTGGATCTCTTGAAGGTGCTTCTTTTTTTCACTTTTTCTTTTTGTTGGAAATATTATGAACATTGGTGGTAGGGTTGT
TGAATCAGTTTGTTGGAATGAAACCTTAAATGGAGATGGATTTAGATGAATCTCTGGAATTTCCAAAGGGTTTTTGCAAAATGTAATAAATAAATGAGATGAACTATGAA
GTAAAAGGTTCTTTGTTAATCTT
Protein sequenceShow/hide protein sequence
MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWTDGKPQKPIIRSDNPEA