; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13892 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13892
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein with multiple splicing 2-like
Genome locationCarg_Chr08:4648220..4650376
RNA-Seq ExpressionCarg13892
SyntenyCarg13892
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059349.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]4.7e-16092.56Show/hide
Query:  MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF+TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA AYDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYG YP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYP

Query:  VHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG
        V PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVN A+NVHH LQGAVIPSSGSVG
Subjt:  VHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG

Query:  MRIQYPFLY
        MRIQYPFLY
Subjt:  MRIQYPFLY

KAG7025936.1 RNA-binding protein with multiple splicing 2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-175100Show/hide
Query:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
        MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
Subjt:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS

Query:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
        NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
Subjt:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH

Query:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
        PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Subjt:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR

Query:  IQYPFLY
        IQYPFLY
Subjt:  IQYPFLY

XP_022964124.1 RNA-binding protein with multiple splicing 2-like [Cucurbita moschata]4.1e-17299.67Show/hide
Query:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
        MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
Subjt:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS

Query:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
        NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
Subjt:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH

Query:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
        PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Subjt:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR

Query:  IQY
        IQ+
Subjt:  IQY

XP_022999922.1 RNA-binding protein with multiple splicing 2-like [Cucurbita maxima]3.9e-17099.01Show/hide
Query:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
        MAGTGIHPYHHQWS AAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
Subjt:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS

Query:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
        NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPP PIWGPHGYMAPPPPPYDPYGSYPVH
Subjt:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH

Query:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
        PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Subjt:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR

Query:  IQY
        IQ+
Subjt:  IQY

XP_023515333.1 RNA-binding protein with multiple splicing 2-like [Cucurbita pepo subsp. pepo]5.4e-17299.34Show/hide
Query:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
        MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRT+FLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
Subjt:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS

Query:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
        NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
Subjt:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH

Query:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
        PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Subjt:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR

Query:  IQY
        IQ+
Subjt:  IQY

TrEMBL top hitse value%identityAlignment
A0A1S3CH02 RNA-binding protein with multiple splicing3.1e-15792.13Show/hide
Query:  MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF+TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA AYDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYG YP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYP

Query:  VHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG
        V PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVN A+NVHH LQGAVIPSSGSVG
Subjt:  VHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG

Query:  MRIQY
        MRIQ+
Subjt:  MRIQY

A0A5A7V0M8 RNA-binding protein with multiple splicing2.3e-16092.56Show/hide
Query:  MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF+TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA AYDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYG YP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYP

Query:  VHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG
        V PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVN A+NVHH LQGAVIPSSGSVG
Subjt:  VHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG

Query:  MRIQYPFLY
        MRIQYPFLY
Subjt:  MRIQYPFLY

A0A5D3BWV1 RNA-binding protein with multiple splicing2.3e-16092.56Show/hide
Query:  MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF+TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYP
        FSNAQ AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA AYDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYG YP
Subjt:  FSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYP

Query:  VHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG
        V PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVN A+NVHH LQGAVIPSSGSVG
Subjt:  VHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG

Query:  MRIQYPFLY
        MRIQYPFLY
Subjt:  MRIQYPFLY

A0A6J1HM77 RNA-binding protein with multiple splicing 2-like2.0e-17299.67Show/hide
Query:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
        MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
Subjt:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS

Query:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
        NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
Subjt:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH

Query:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
        PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Subjt:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR

Query:  IQY
        IQ+
Subjt:  IQY

A0A6J1KC37 RNA-binding protein with multiple splicing 2-like1.9e-17099.01Show/hide
Query:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
        MAGTGIHPYHHQWS AAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS
Subjt:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFS

Query:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH
        NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPP PIWGPHGYMAPPPPPYDPYGSYPVH
Subjt:  NAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH

Query:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
        PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Subjt:  PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR

Query:  IQY
        IQ+
Subjt:  IQY

SwissProt top hitse value%identityAlignment
O74452 Cell wall integrity protein scw11.5e-0730.05Show/hide
Query:  LHTEMAKKNLFVKRGIVADA-DAYDQSKRLRTGGEYAHTGYSSPSPFHAPP--PPIWGPHGYMAPPPPPYDPYGSY-PVHPVPMPAPAPVPAPCSYVPVQ
        ++T +A+  L  ++G  A   ++  QS   R     A++ +S+ SP   PP  P     + + A    P  P+ +Y   H +    PA  P         
Subjt:  LHTEMAKKNLFVKRGIVADA-DAYDQSKRLRTGGEYAHTGYSSPSPFHAPP--PPIWGPHGYMAPPPPPYDPYGSY-PVHPVPMPAPAPVPAPCSYVPVQ

Query:  NTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMRIQY
            NPPCNT+++GNL  + +EEEL+ LFS Q G+K++    +    +CF+EFE++  A      LQG  + SS   G+R+ +
Subjt:  NTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMRIQY

Q6DH13 RNA-binding protein, mRNA-processing factor 2a6.7e-0830.81Show/hide
Query:  NPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD
        N +    +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD ES   L  E AK N    K  ++A 
Subjt:  NPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD

Query:  ADAYDQSKRLRTGGEY-AHTGYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNP
         +  +    L  G  + A   Y        P  P  W P+        P  P+ ++  +P    A A + A   + P  +    P
Subjt:  ADAYDQSKRLRTGGEY-AHTGYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNP

Q8VC52 RNA-binding protein with multiple splicing 27.7e-1245.12Show/hide
Query:  DEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKN
        +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  DEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q93062 RNA-binding protein with multiple splicing1.5e-0732.32Show/hide
Query:  DEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVADADAYDQS
        +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD E    L  E AK N    K  +V   +     
Subjt:  DEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVADADAYDQS

Query:  KRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDP--YGSYPVHPVPMPAPAPVPA
                      S+P P   P      P+    P   P  P  +  YP++P  +    P PA
Subjt:  KRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDP--YGSYPVHPVPMPAPAPVPA

Q9WVB0 RNA-binding protein with multiple splicing6.7e-0832.14Show/hide
Query:  DEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVADADAYDQS
        +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD E    L  E AK N    K  +V   +     
Subjt:  DEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVADADAYDQS

Query:  KRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDP--YGSYPVHPVPMPAPAPVPAPCSY
                      S+P P   P      P+    P   P  P  +  YP++P  +    P PA  +Y
Subjt:  KRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDP--YGSYPVHPVPMPAPAPVPAPCSY

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-3238.08Show/hide
Query:  YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQ
        Y H   PA  PPPPP    ++P PI   H    P+H+ +      A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q
Subjt:  YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQ

Query:  LAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVP
         A+A   AL  MVFD E  S LH ++AK N   KR      D ++  K+L++      +G+ S   F  P                 Y+  G  P     
Subjt:  LAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVP

Query:  MPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS--GSVGMRI
        + A     AP S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++K        V F++F+DV+ +S   H LQG V+ SS  G V +R+
Subjt:  MPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS--GSVGMRI

Query:  QY
        QY
Subjt:  QY

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-3438.36Show/hide
Query:  YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQ
        Y H   PA  PPPPP    ++P PI   H    P+H+ +      A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q
Subjt:  YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQ

Query:  LAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVP
         A+A   AL  MVFD E  S LH ++AK N   KR      D ++  K+L++      +G+ S   F  P                 Y+  G  P     
Subjt:  LAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVP

Query:  MPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS--GSVGMRI
        + A     AP S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++K        V F++F+DV+ +S   H LQG V+ SS  G V +R+
Subjt:  MPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS--GSVGMRI

Query:  QYPFL
        QYP L
Subjt:  QYPFL

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.2e-3237.8Show/hide
Query:  YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQ
        Y H   PA  PPPPP    ++P PI   H    P+H+ +      A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q
Subjt:  YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQ

Query:  LAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVP
         A+A   AL  MVFD E  S LH ++AK N   KR      D ++  K+L++      +G+ S   F  P                 Y+  G  P     
Subjt:  LAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVP

Query:  MPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS
        + A     AP S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++K        V F++F+DV+ +S   H LQG V+ SS
Subjt:  MPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-1829.68Show/hide
Query:  YPHPSH------ILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLH
        + HP H      +L D P       + T+F++GLP DVK RE+ NL R   G+E+ Q+ +  +G++ + FA F++ + A+AA + L  + FD ++ S LH
Subjt:  YPHPSH------ILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLH

Query:  TEMAKKNLFVKRG------IVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQ
         E+A+ N   K        +V D    + SK   +  + +  G S P     P        G    P             P    + AP          +
Subjt:  TEMAKKNLFVKRG------IVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQ

Query:  NTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMRIQY
               C+TLFI NLG N  E+EL+ L S  PGF  +K   +    V F +FE++  A++  + LQG ++ SS   GM I+Y
Subjt:  NTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMRIQY

AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-13176.95Show/hide
Query:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIP----YPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGF
        MAG GIHPYH QW PA APPPP   ++ APP  P    +P P  +LVDN  R   DE+RTIF+ GLP+DVKEREL NLLRWLPGYEASQVNFKGEKPMGF
Subjt:  MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIP----YPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGF

Query:  ALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYDPYG
        ALFS AQ A+AAKD LQ MVFDAESKSV+HTEMAKKNLFVKRGIV D++AYDQSKRLRTGG+  H+ Y SPSPFH PPPP+WG PHGYMAP PPPYDPY 
Subjt:  ALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYDPYG

Query:  SYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSG
         Y   PVPMP P P+ AP SYVPVQN KDNPPCNTLFIGNLGEN+NEEELR L S QPGFKQMK LRQERH VCFIEFEDVN+A+NVHH LQGAVIPSSG
Subjt:  SYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSG

Query:  SVGMRIQY
        S+GMRIQY
Subjt:  SVGMRIQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTACTGGAATCCACCCGTACCACCACCAATGGTCTCCGGCGGCTGCCCCTCCTCCTCCGCCACAAGCCACTGCCATCGCTCCTCCTCCTATTCCCTATCCCCA
TCCTTCTCACATCCTCGTCGACAACCCCGCCCGTCATGCCTCCGATGAGGTTCGGACTATATTTCTAACAGGTCTTCCGGAAGATGTGAAAGAGAGAGAGCTACAGAATC
TTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGTGAAAAGCCTATGGGCTTTGCTCTCTTTTCCAACGCTCAGCTTGCTATTGCTGCGAAAGAC
GCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGCATTGTTGCTGATGCAGATGCTTA
TGACCAAAGTAAACGTTTGAGAACTGGTGGTGAATATGCCCACACCGGGTATTCGAGCCCATCACCATTTCATGCACCTCCACCCCCTATTTGGGGACCTCACGGGTATA
TGGCTCCACCTCCTCCTCCATATGATCCGTATGGAAGTTACCCTGTTCATCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTTGCAGCTATGTGCCTGTTCAG
AACACAAAAGATAATCCTCCTTGCAATACACTGTTCATTGGCAATCTGGGGGAAAATGTAAATGAAGAGGAGCTCAGAGGTCTTTTTAGCGTACAACCGGGATTTAAGCA
AATGAAGACTCTGAGGCAGGAAAGGCATAAAGTCTGTTTCATTGAATTTGAAGATGTGAACACTGCCTCCAATGTGCATCATCTTTTGCAGGGTGCTGTTATTCCTAGTT
CTGGCTCTGTGGGCATGAGAATACAATATCCTTTTCTTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTACTGGAATCCACCCGTACCACCACCAATGGTCTCCGGCGGCTGCCCCTCCTCCTCCGCCACAAGCCACTGCCATCGCTCCTCCTCCTATTCCCTATCCCCA
TCCTTCTCACATCCTCGTCGACAACCCCGCCCGTCATGCCTCCGATGAGGTTCGGACTATATTTCTAACAGGTCTTCCGGAAGATGTGAAAGAGAGAGAGCTACAGAATC
TTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGTGAAAAGCCTATGGGCTTTGCTCTCTTTTCCAACGCTCAGCTTGCTATTGCTGCGAAAGAC
GCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGCATTGTTGCTGATGCAGATGCTTA
TGACCAAAGTAAACGTTTGAGAACTGGTGGTGAATATGCCCACACCGGGTATTCGAGCCCATCACCATTTCATGCACCTCCACCCCCTATTTGGGGACCTCACGGGTATA
TGGCTCCACCTCCTCCTCCATATGATCCGTATGGAAGTTACCCTGTTCATCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTTGCAGCTATGTGCCTGTTCAG
AACACAAAAGATAATCCTCCTTGCAATACACTGTTCATTGGCAATCTGGGGGAAAATGTAAATGAAGAGGAGCTCAGAGGTCTTTTTAGCGTACAACCGGGATTTAAGCA
AATGAAGACTCTGAGGCAGGAAAGGCATAAAGTCTGTTTCATTGAATTTGAAGATGTGAACACTGCCTCCAATGTGCATCATCTTTTGCAGGGTGCTGTTATTCCTAGTT
CTGGCTCTGTGGGCATGAGAATACAATATCCTTTTCTTTACTAA
Protein sequenceShow/hide protein sequence
MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKD
ALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQ
NTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMRIQYPFLY