; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13897 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13897
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCarg_Chr08:4619048..4619893
RNA-Seq ExpressionCarg13897
SyntenyCarg13897
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593587.1 RING-H2 finger protein ATL60, partial [Cucurbita argyrosperma subsp. sororia]9.4e-147100Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
        MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQG
        SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQG
Subjt:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQG

XP_022964315.1 RING-H2 finger protein ATL60-like isoform X1 [Cucurbita moschata]2.6e-14498.93Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
        MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        LECAVCLSELAQGEK RLLPRC+HGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
        SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGT GRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
Subjt:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ

XP_022964316.1 RING-H2 finger protein ATL60-like isoform X2 [Cucurbita moschata]4.2e-12398.73Show/hide
Query:  LYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPL
        LYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEK RLLPRC+HGFHVDCIDMWFKSNSTCPL
Subjt:  LYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPL

Query:  CRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEM
        CRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGT GRSAGEEM
Subjt:  CRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEM

Query:  KSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
        KSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
Subjt:  KSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ

XP_023000132.1 RING-H2 finger protein ATL60-like [Cucurbita maxima]3.6e-13896.09Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
        MEEH SGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRI ESSSDSA+LRRSDQES VAT+TKGLDA VLRLIPVVVFSPEDFKEG
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPK SIPTE+NSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  -SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
         SSSSSSSSSSSNIRADGMVVIDIPNE SSSSSGT GRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
Subjt:  -SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ

XP_023513774.1 RING-H2 finger protein ATL60-like [Cucurbita pepo subsp. pepo]2.2e-14097.86Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
        MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRI ESSSDSAVLRRSDQES VATLTKGLDAAVLRLIPVVVFSPEDFKEG
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPK SIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  -SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
         SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSS T GRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
Subjt:  -SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ

TrEMBL top hitse value%identityAlignment
A0A0A0K6T2 RING-type E3 ubiquitin transferase7.6e-9472.24Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVA-TLTKGLDAAVLRLIPVVVFSPEDFKE
        MEE AS IS  F  S+ MEL GKIM AAI IL LVI FVL+LQLYSRW LSR+H+SSSDSA    ++QES V+ TL KGLD+AVL  IPVVVFSP DFKE
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVA-TLTKGLDAAVLRLIPVVVFSPEDFKE

Query:  GLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQ
        GLECAVCLSEL++GEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCR+PVA      TE NS ++ E+GSSMESPIFPTN+LFWGNQMQ+SSRGVCLEE Q
Subjt:  GLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQ

Query:  TSSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
         SSSSSS+SSS N     MVVIDIPNEPS+S +GT    A EEM SVVT+RL+TLKRLLSRERRIG N    ++EQ G  Q
Subjt:  TSSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ

A0A6J1D188 RING-type E3 ubiquitin transferase6.7e-9871.38Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
        MEEH S I++ F GS  MEL GKIM AAI ILFLVI+FVL+LQLYSRW LSRI ES+ DSA    S Q+S    L KGLDAAVLR +PV+VF   DF+EG
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        LECAVCLSELAQGE+ARLLPRCNHGFHVDCIDMWFKSNSTCPLCR+PVA +   P++ NSAEDLESGSS+ESPIFPTN+LFWGNQMQ+SSRGVCLEEA T
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSS--GTGGRSAGEEMKSVVTSRLKTLKRLLSRERRI-GNNLTSLNLEQAGRAQ
              SSSS+N R DG+V IDIPNEPS+SSS  G GG +  EEMKS +T+RL+TLKRLLS ERR  GN+LT  +LEQ GR Q
Subjt:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSS--GTGGRSAGEEMKSVVTSRLKTLKRLLSRERRI-GNNLTSLNLEQAGRAQ

A0A6J1HIK6 RING-type E3 ubiquitin transferase2.1e-12398.73Show/hide
Query:  LYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPL
        LYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEK RLLPRC+HGFHVDCIDMWFKSNSTCPL
Subjt:  LYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPL

Query:  CRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEM
        CRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGT GRSAGEEM
Subjt:  CRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEM

Query:  KSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
        KSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
Subjt:  KSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ

A0A6J1HKG4 RING-type E3 ubiquitin transferase1.2e-14498.93Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
        MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        LECAVCLSELAQGEK RLLPRC+HGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
        SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGT GRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
Subjt:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ

A0A6J1KCR2 RING-type E3 ubiquitin transferase1.7e-13896.09Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG
        MEEH SGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRI ESSSDSA+LRRSDQES VAT+TKGLDA VLRLIPVVVFSPEDFKEG
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPK SIPTE+NSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  -SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
         SSSSSSSSSSSNIRADGMVVIDIPNE SSSSSGT GRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ
Subjt:  -SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQ

SwissProt top hitse value%identityAlignment
O22255 RING-H2 finger protein ATL642.7e-2441.67Show/hide
Query:  LMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLT-----KGLDAAVLRLIPVVVFS---PEDFKEGLECAVCLSELA
        L GKIM +++ +LF+ ++ +L    Y+RWL  R      +  + RR    S + TL+     + LD AVL  IP+ V+S   P   +E  EC+VCLSE  
Subjt:  LMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLT-----KGLDAAVLRLIPVVVFS---PEDFKEGLECAVCLSELA

Query:  QGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESP--IFPT
        + ++ RLLP+C H FHVDCID WF+S STCPLCR PV P   +         +E+GSS  S    FPT
Subjt:  QGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESP--IFPT

P0C035 RING-H2 finger protein ATL604.7e-4039.14Show/hide
Query:  FEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSR---------WLLSRIHESSSDSAVLRRSD--------QESDVATLTKGLDAAVLRLIPVVVFSP
        FEG    E MGK++  +I  +F  I+F+L+L LY+R         + L+ I      S V+ R+         Q  +      GLD+ +L+ I VVVF  
Subjt:  FEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSR---------WLLSRIHESSSDSAVLRRSD--------QESDVATLTKGLDAAVLRLIPVVVFSP

Query:  EDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMES----------------------
         DFK+GLECAVCLS+L  G+KAR+LPRCNHGFHVDCIDMWF+S+STCPLCR+ V       T    +E L    + ES                      
Subjt:  EDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMES----------------------

Query:  PI-FPTNILFWGNQMQISSRGVCLEEAQTSSSSSSS-------SSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRI
        P+ FPTN+L WG+Q Q+ S G+ + E   S + ++S       SSS+  +    VV+DIP+   +SS     R   EE KS + +RL+ LK +LSRE+  
Subjt:  PI-FPTNILFWGNQMQISSRGVCLEEAQTSSSSSSS-------SSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRI

Query:  GNNL
         NN+
Subjt:  GNNL

Q8L9T5 RING-H2 finger protein ATL26.5e-2634.59Show/hide
Query:  SFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIH--------ESSSDSAVLRRSDQESDVATL--TKGLDAAVLRLIPVVVFSPEDFKEG
        +F GS T  + GKIM +AI ILF V++ ++ L LY+RW L R           +   + V   +D  +   ++  ++GLD  V++ +PV  FS E  K+ 
Subjt:  SFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIH--------ESSSDSAVLRRSDQESDVATL--TKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        +ECAVCLSE  + E  R+LP C H FHVDCIDMWF S+STCPLCR  V     I +   +A + E   +++S   P  ++      + SS     +E   
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGR---SAGEEMKSVVTSRLKTLKRLLSRERR
        S SS      S  +      I++P    S       R    A +  +S + SR+ +  R+LSR+RR
Subjt:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGR---SAGEEMKSVVTSRLKTLKRLLSRERR

Q9LZJ6 RING-H2 finger protein ATL53.0e-2332.1Show/hide
Query:  GSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHES-----SSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGL-ECAVCL
        GS    L GKIM A++ ILF+ ++ +L    Y+RWL  R +       S+    L  +   +  ++    LD  VL  IP+ V+S +  +  L EC+VCL
Subjt:  GSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHES-----SSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGL-ECAVCL

Query:  SELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIP---------TEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEA
        SE  + ++ R+LP+C H FHVDCID WF+S S+CPLCR PV P   +            +   ED E+GSS  S                       +E+
Subjt:  SELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIP---------TEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEA

Query:  QTSSSSSSSSSSSNIRADGM---------VVIDIPNEPSSSSS
        ++S+ SSSS S      +           ++++IP E   S+S
Subjt:  QTSSSSSSSSSSSNIRADGM---------VVIDIPNEPSSSSS

Q9XF63 RING-H2 finger protein ATL32.0e-3834.15Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSR---WLLSRIHESSSDSAVLRRSDQESDVATL----------------------
        M+++ S  S  F    T E+  KI+  AI +LF+ ++FVLIL LY++   W + ++ +        +  +QE D +++                      
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSR---WLLSRIHESSSDSAVLRRSDQESDVATL----------------------

Query:  -TKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPV-APKPS-------IPTE------MNS
           GL +  L  +P+V F  +  K+GLEC++CLSEL +G+KARLLP+CNH FHV+CIDMWF+S+STCP+CR+ V  P+ +       +P         N+
Subjt:  -TKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPV-APKPS-------IPTE------MNS

Query:  AEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEP------SSSSSGTGGRSAGEEMKSVVTSRLKTL
          D  S  S  SP FPTN+L WG Q Q+S+    +   +  ++ + +S S        VV+DI +        SSSSS        EE KS +T+RL++L
Subjt:  AEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEP------SSSSSGTGGRSAGEEMKSVVTSRLKTL

Query:  KRLLSRERRIGNNLTSLNLEQAGRA
        +R LSR++R+G + +S +   +  A
Subjt:  KRLLSRERRIGNNLTSLNLEQAGRA

Arabidopsis top hitse value%identityAlignment
AT1G53820.1 RING/U-box superfamily protein3.3e-4139.14Show/hide
Query:  FEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSR---------WLLSRIHESSSDSAVLRRSD--------QESDVATLTKGLDAAVLRLIPVVVFSP
        FEG    E MGK++  +I  +F  I+F+L+L LY+R         + L+ I      S V+ R+         Q  +      GLD+ +L+ I VVVF  
Subjt:  FEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSR---------WLLSRIHESSSDSAVLRRSD--------QESDVATLTKGLDAAVLRLIPVVVFSP

Query:  EDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMES----------------------
         DFK+GLECAVCLS+L  G+KAR+LPRCNHGFHVDCIDMWF+S+STCPLCR+ V       T    +E L    + ES                      
Subjt:  EDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMES----------------------

Query:  PI-FPTNILFWGNQMQISSRGVCLEEAQTSSSSSSS-------SSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRI
        P+ FPTN+L WG+Q Q+ S G+ + E   S + ++S       SSS+  +    VV+DIP+   +SS     R   EE KS + +RL+ LK +LSRE+  
Subjt:  PI-FPTNILFWGNQMQISSRGVCLEEAQTSSSSSSS-------SSSSNIRADGMVVIDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRI

Query:  GNNL
         NN+
Subjt:  GNNL

AT1G72310.1 RING/U-box superfamily protein1.4e-3934.15Show/hide
Query:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSR---WLLSRIHESSSDSAVLRRSDQESDVATL----------------------
        M+++ S  S  F    T E+  KI+  AI +LF+ ++FVLIL LY++   W + ++ +        +  +QE D +++                      
Subjt:  MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSR---WLLSRIHESSSDSAVLRRSDQESDVATL----------------------

Query:  -TKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPV-APKPS-------IPTE------MNS
           GL +  L  +P+V F  +  K+GLEC++CLSEL +G+KARLLP+CNH FHV+CIDMWF+S+STCP+CR+ V  P+ +       +P         N+
Subjt:  -TKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPV-APKPS-------IPTE------MNS

Query:  AEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEP------SSSSSGTGGRSAGEEMKSVVTSRLKTL
          D  S  S  SP FPTN+L WG Q Q+S+    +   +  ++ + +S S        VV+DI +        SSSSS        EE KS +T+RL++L
Subjt:  AEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVVIDIPNEP------SSSSSGTGGRSAGEEMKSVVTSRLKTL

Query:  KRLLSRERRIGNNLTSLNLEQAGRA
        +R LSR++R+G + +S +   +  A
Subjt:  KRLLSRERRIGNNLTSLNLEQAGRA

AT2G47560.1 RING/U-box superfamily protein2.0e-2541.67Show/hide
Query:  LMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLT-----KGLDAAVLRLIPVVVFS---PEDFKEGLECAVCLSELA
        L GKIM +++ +LF+ ++ +L    Y+RWL  R      +  + RR    S + TL+     + LD AVL  IP+ V+S   P   +E  EC+VCLSE  
Subjt:  LMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLT-----KGLDAAVLRLIPVVVFS---PEDFKEGLECAVCLSELA

Query:  QGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESP--IFPT
        + ++ RLLP+C H FHVDCID WF+S STCPLCR PV P   +         +E+GSS  S    FPT
Subjt:  QGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESP--IFPT

AT3G16720.1 TOXICOS EN LEVADURA 24.6e-2734.59Show/hide
Query:  SFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIH--------ESSSDSAVLRRSDQESDVATL--TKGLDAAVLRLIPVVVFSPEDFKEG
        +F GS T  + GKIM +AI ILF V++ ++ L LY+RW L R           +   + V   +D  +   ++  ++GLD  V++ +PV  FS E  K+ 
Subjt:  SFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIH--------ESSSDSAVLRRSDQESDVATL--TKGLDAAVLRLIPVVVFSPEDFKEG

Query:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT
        +ECAVCLSE  + E  R+LP C H FHVDCIDMWF S+STCPLCR  V     I +   +A + E   +++S   P  ++      + SS     +E   
Subjt:  LECAVCLSELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQT

Query:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGR---SAGEEMKSVVTSRLKTLKRLLSRERR
        S SS      S  +      I++P    S       R    A +  +S + SR+ +  R+LSR+RR
Subjt:  SSSSSSSSSSSNIRADGMVVIDIPNEPSSSSSGTGGR---SAGEEMKSVVTSRLKTLKRLLSRERR

AT3G62690.1 AtL52.2e-2432.1Show/hide
Query:  GSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHES-----SSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGL-ECAVCL
        GS    L GKIM A++ ILF+ ++ +L    Y+RWL  R +       S+    L  +   +  ++    LD  VL  IP+ V+S +  +  L EC+VCL
Subjt:  GSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHES-----SSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGL-ECAVCL

Query:  SELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIP---------TEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEA
        SE  + ++ R+LP+C H FHVDCID WF+S S+CPLCR PV P   +            +   ED E+GSS  S                       +E+
Subjt:  SELAQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIP---------TEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEA

Query:  QTSSSSSSSSSSSNIRADGM---------VVIDIPNEPSSSSS
        ++S+ SSSS S      +           ++++IP E   S+S
Subjt:  QTSSSSSSSSSSSNIRADGM---------VVIDIPNEPSSSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACATGCATCGGGGATCAGTAAGTCATTCGAGGGCTCTCTTACCATGGAGCTAATGGGGAAGATCATGGCGGCGGCCATTTTCATCCTCTTTTTGGTGATTGT
GTTTGTTTTGATTTTACAGCTTTACTCCAGATGGTTATTGTCCCGCATTCATGAATCGTCGTCGGATTCTGCCGTTCTGCGTCGGTCTGATCAGGAGTCTGATGTAGCTA
CATTAACGAAAGGGCTGGATGCCGCTGTGCTCCGGTTGATTCCGGTAGTGGTGTTCTCGCCGGAGGATTTCAAAGAAGGGTTGGAATGTGCTGTGTGTTTGTCGGAGTTG
GCTCAGGGTGAGAAAGCTCGGTTGCTTCCAAGGTGCAACCATGGCTTCCATGTTGATTGTATTGACATGTGGTTCAAATCCAATTCCACTTGCCCTCTCTGCAGAGATCC
AGTGGCTCCCAAACCCTCAATCCCCACGGAGATGAACTCTGCAGAGGATTTGGAATCTGGGTCTTCAATGGAGTCTCCTATTTTTCCAACGAACATTCTGTTTTGGGGGA
ATCAAATGCAGATAAGTTCAAGAGGGGTTTGTTTGGAAGAAGCTCAAACTTCTTCTTCCTCTTCCTCTTCTTCTTCATCATCTAACATAAGGGCAGATGGAATGGTGGTT
ATAGACATTCCAAACGAGCCCTCTTCATCGTCCTCCGGCACCGGCGGCCGTTCCGCCGGTGAAGAGATGAAATCAGTGGTGACATCCAGATTGAAAACGTTGAAAAGGCT
TCTGAGCAGAGAGAGAAGAATCGGCAACAATCTCACTTCCCTGAATCTTGAACAAGCAGGGAGAGCGCAGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACATGCATCGGGGATCAGTAAGTCATTCGAGGGCTCTCTTACCATGGAGCTAATGGGGAAGATCATGGCGGCGGCCATTTTCATCCTCTTTTTGGTGATTGT
GTTTGTTTTGATTTTACAGCTTTACTCCAGATGGTTATTGTCCCGCATTCATGAATCGTCGTCGGATTCTGCCGTTCTGCGTCGGTCTGATCAGGAGTCTGATGTAGCTA
CATTAACGAAAGGGCTGGATGCCGCTGTGCTCCGGTTGATTCCGGTAGTGGTGTTCTCGCCGGAGGATTTCAAAGAAGGGTTGGAATGTGCTGTGTGTTTGTCGGAGTTG
GCTCAGGGTGAGAAAGCTCGGTTGCTTCCAAGGTGCAACCATGGCTTCCATGTTGATTGTATTGACATGTGGTTCAAATCCAATTCCACTTGCCCTCTCTGCAGAGATCC
AGTGGCTCCCAAACCCTCAATCCCCACGGAGATGAACTCTGCAGAGGATTTGGAATCTGGGTCTTCAATGGAGTCTCCTATTTTTCCAACGAACATTCTGTTTTGGGGGA
ATCAAATGCAGATAAGTTCAAGAGGGGTTTGTTTGGAAGAAGCTCAAACTTCTTCTTCCTCTTCCTCTTCTTCTTCATCATCTAACATAAGGGCAGATGGAATGGTGGTT
ATAGACATTCCAAACGAGCCCTCTTCATCGTCCTCCGGCACCGGCGGCCGTTCCGCCGGTGAAGAGATGAAATCAGTGGTGACATCCAGATTGAAAACGTTGAAAAGGCT
TCTGAGCAGAGAGAGAAGAATCGGCAACAATCTCACTTCCCTGAATCTTGAACAAGCAGGGAGAGCGCAGGGTTAA
Protein sequenceShow/hide protein sequence
MEEHASGISKSFEGSLTMELMGKIMAAAIFILFLVIVFVLILQLYSRWLLSRIHESSSDSAVLRRSDQESDVATLTKGLDAAVLRLIPVVVFSPEDFKEGLECAVCLSEL
AQGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRDPVAPKPSIPTEMNSAEDLESGSSMESPIFPTNILFWGNQMQISSRGVCLEEAQTSSSSSSSSSSSNIRADGMVV
IDIPNEPSSSSSGTGGRSAGEEMKSVVTSRLKTLKRLLSRERRIGNNLTSLNLEQAGRAQG