; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13920 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13920
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description25.3 kDa vesicle transport protein
Genome locationCarg_Chr08:4468358..4471671
RNA-Seq ExpressionCarg13920
SyntenyCarg13920
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0048280 - vesicle fusion with Golgi apparatus (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005793 - endoplasmic reticulum-Golgi intermediate compartment (cellular component)
GO:0012507 - ER to Golgi transport vesicle membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsIPR001388 - Synaptobrevin
IPR042855 - v-SNARE, coiled-coil homology domain
IPR044565 - Vesicle-trafficking protein Sec22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025908.1 25.3 kDa vesicle transport protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-48100Show/hide
Query:  MDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKS
        MDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKS
Subjt:  MDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKS

Query:  KIW
        KIW
Subjt:  KIW

XP_008462269.1 PREDICTED: 25.3 kDa vesicle transport protein [Cucumis melo]3.1e-4799.02Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        IW
Subjt:  IW

XP_022964571.1 25.3 kDa vesicle transport protein-like [Cucurbita moschata]1.4e-47100Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        IW
Subjt:  IW

XP_022999889.1 25.3 kDa vesicle transport protein [Cucurbita maxima]1.4e-47100Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        IW
Subjt:  IW

XP_038898947.1 25.3 kDa vesicle transport protein [Benincasa hispida]3.1e-4799.02Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        IW
Subjt:  IW

TrEMBL top hitse value%identityAlignment
A0A0A0K6X0 Uncharacterized protein1.5e-4799.02Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        IW
Subjt:  IW

A0A1S3CGL3 25.3 kDa vesicle transport protein1.5e-4799.02Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        IW
Subjt:  IW

A0A6J1HJB8 25.3 kDa vesicle transport protein-like6.7e-48100Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        IW
Subjt:  IW

A0A6J1JTF4 25.3 kDa vesicle transport protein-like2.6e-4798.04Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        +W
Subjt:  IW

A0A6J1KID7 25.3 kDa vesicle transport protein6.7e-48100Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        IW
Subjt:  IW

SwissProt top hitse value%identityAlignment
P22214 Protein transport protein SEC223.6e-1444.33Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIV-FGVVFLLFW
        D F+Q TKK Y D + Q N+ +LN EL  V QIM++N++++L  G+ LD++S MSS L   S+ Y   A+ +N   LI ++AP+ IV F  VFL +W
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIV-FGVVFLLFW

Q6C880 Protein transport protein SEC221.1e-1543.3Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAP-VAIVFGVVFLLFW
        DTF+QKTK++YQDTR   N+ KLN EL +V ++MT+N++++L  G  LD +S +SS L +ES+ Y   A+ +N +A+IR++ P + +    +F+L+W
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAP-VAIVFGVVFLLFW

Q6CJA0 Protein transport protein SEC228.5e-1645.36Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIV-FGVVFLLFW
        D F+QKTKK+Y D R Q N+ +LN +L  V QIMT+N++++L  G+ LD++S MS+ L  +++ Y   A+ +N   LI ++AP+AI+ F  VFLL+W
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIV-FGVVFLLFW

Q74ZD2 Protein transport protein SEC222.1e-1441.24Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIV-FGVVFLLFW
        D F+QKTKK+Y D R Q N+ +LN +L  V QIMT+N++++L  G+ LD++S +S+ L  +S+ Y   A+ +N   L+ ++APVA++    +FL++W
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIV-FGVVFLLFW

Q94AU2 25.3 kDa vesicle transport protein2.2e-4895.1Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVS+MSSRLTSESRIYADKA+DLNRQALIRKWAPVAIVFGVVFLLFW K+K
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        +W
Subjt:  IW

Arabidopsis top hitse value%identityAlignment
AT1G11890.1 Synaptobrevin family protein1.6e-4995.1Show/hide
Query:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK
        DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVS+MSSRLTSESRIYADKA+DLNRQALIRKWAPVAIVFGVVFLLFW K+K
Subjt:  DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSK

Query:  IW
        +W
Subjt:  IW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACATTCATACAGAAGACCAAGAAATTGTACCAGGATACACGTACTCAGCGTAATATTGCAAAGTTGAACGATGAACTTTATGAAGTCCACCAAATAATG
ACTCGCAATGTTCAGGAAGTTCTTGGTGTTGGTGAAAAATTAGACCAGGTCAGTCAAATGTCAAGTAGGTTGACATCAGAATCCCGCATATATGCTGATAAGGCT
AGAGATTTAAACCGGCAGGCATTAATCCGAAAGTGGGCACCTGTTGCTATTGTGTTTGGAGTTGTATTCCTGCTATTCTGGTTCAAATCAAAGATCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATACATTCATACAGAAGACCAAGAAATTGTACCAGGATACACGTACTCAGCGTAATATTGCAAAGTTGAACGATGAACTTTATGAAGTCCACCAAATAATG
ACTCGCAATGTTCAGGAAGTTCTTGGTGTTGGTGAAAAATTAGACCAGGTCAGTCAAATGTCAAGTAGGTTGACATCAGAATCCCGCATATATGCTGATAAGGCT
AGAGATTTAAACCGGCAGGCATTAATCCGAAAGTGGGCACCTGTTGCTATTGTGTTTGGAGTTGTATTCCTGCTATTCTGGTTCAAATCAAAGATCTGGTGA
Protein sequenceShow/hide protein sequence
MDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSKIW