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Carg13928 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13928
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNucleoside-diphosphate kinase
Genome locationCarg_Chr08:4418573..4424153
RNA-Seq ExpressionCarg13928
SyntenyCarg13928
Gene Ontology termsGO:0006165 - nucleoside diphosphate phosphorylation (biological process)
GO:0006183 - GTP biosynthetic process (biological process)
GO:0006228 - UTP biosynthetic process (biological process)
GO:0006241 - CTP biosynthetic process (biological process)
GO:0004550 - nucleoside diphosphate kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR034907 - Nucleoside diphosphate kinase-like domain
IPR036850 - Nucleoside diphosphate kinase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575435.1 putative nucleoside diphosphate kinase 5, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2070.27Show/hide
Query:  FASNGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        FASNG METEKTLAM+KPDGL GNYTD I+ AI++SGFRILKER++EL EDRASRF AEH S+SF  +L+  ++
Subjt:  FASNGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
KAG7025901.1 putative nucleoside diphosphate kinase 5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-88100Show/hide
Query:  MKRKFSLTNRLILRLPVISKLPPSSSSQSLSPLILYCFQLSRHYIILQLLQFLALSTRLYESQTLTFLLVVTCFSFFDLLLIHIINNSYNIEWREFRFAS
        MKRKFSLTNRLILRLPVISKLPPSSSSQSLSPLILYCFQLSRHYIILQLLQFLALSTRLYESQTLTFLLVVTCFSFFDLLLIHIINNSYNIEWREFRFAS
Subjt:  MKRKFSLTNRLILRLPVISKLPPSSSSQSLSPLILYCFQLSRHYIILQLLQFLALSTRLYESQTLTFLLVVTCFSFFDLLLIHIINNSYNIEWREFRFAS

Query:  NGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLSYRGLKLK
        NGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLSYRGLKLK
Subjt:  NGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLSYRGLKLK
XP_022964150.1 probable nucleoside diphosphate kinase 5 [Cucurbita moschata]7.5e-2589.71Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        METEKTL MVKPDGLHGN+TDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSL+  ++
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
XP_022999980.1 probable nucleoside diphosphate kinase 5 isoform X1 [Cucurbita maxima]4.6e-2286.76Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        ME EKTLAMVKPDGL GNYTD IKLAILKSGFRILKERIMELHEDRASRF AEHLSRSFLSSL+  ++
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
XP_022999981.1 probable nucleoside diphosphate kinase 5 isoform X2 [Cucurbita maxima]4.6e-2286.76Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        ME EKTLAMVKPDGL GNYTD IKLAILKSGFRILKERIMELHEDRASRF AEHLSRSFLSSL+  ++
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
TrEMBL top hitse value%identityAlignment
A0A6J1GQ66 Nucleoside diphosphate kinase4.6e-2070.27Show/hide
Query:  FASNGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        FASNG METEKTLAM+KPDGL GNYTD I+ AI++SGFRILKER++EL EDRASRF AEH S+SF  +L+  ++
Subjt:  FASNGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
A0A6J1GQ67 Nucleoside diphosphate kinase4.6e-2070.27Show/hide
Query:  FASNGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        FASNG METEKTLAM+KPDGL GNYTD I+ AI++SGFRILKER++EL EDRASRF AEH S+SF  +L+  ++
Subjt:  FASNGSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
A0A6J1HK07 Nucleoside-diphosphate kinase3.6e-2589.71Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        METEKTL MVKPDGLHGN+TDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSL+  ++
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
A0A6J1KEM0 Nucleoside-diphosphate kinase2.2e-2286.76Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        ME EKTLAMVKPDGL GNYTD IKLAILKSGFRILKERIMELHEDRASRF AEHLSRSFLSSL+  ++
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
A0A6J1KH33 Nucleoside-diphosphate kinase2.2e-2286.76Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        ME EKTLAMVKPDGL GNYTD IKLAILKSGFRILKERIMELHEDRASRF AEHLSRSFLSSL+  ++
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
SwissProt top hitse value%identityAlignment
A5WGQ5 Nucleoside diphosphate kinase5.3e-0533.85Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLIS
        M  E+TL+++KPD + GN+   I     ++G +I+  +++ L +++A  F AEH  R F + L+S
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLIS
B3PDL7 Nucleoside diphosphate kinase1.2e-0432.31Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLIS
        M  E+T +++KPD +  N+   I     K+G +++ +R+++L   +A  F AEH  RSF   L++
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLIS
Q1QD23 Nucleoside diphosphate kinase1.1e-0538.46Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLIS
        M  E+TL+++KPD + GN    I     KSG +I+  ++M+L + +A  F AEH  R F + L+S
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLIS
Q4FTX1 Nucleoside diphosphate kinase2.4e-0538.46Show/hide
Query:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLIS
        M  E+TL+++KPD + GN    I     KSG +I+  ++M+L +++A  F AEH  R F + L S
Subjt:  METEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLIS
Q6NLG3 Probable nucleoside diphosphate kinase 51.3e-0845Show/hide
Query:  MVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        M+KPDG+ GNYT+ IK  ++++GF I+KE + +L ++ AS F  EH SRSF   L++ ++
Subjt:  MVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
Arabidopsis top hitse value%identityAlignment
AT1G17410.1 Nucleoside diphosphate kinase family protein9.2e-1345.71Show/hide
Query:  GSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        G+   E+TLAM+KPDG+ GNYT+ IK  ++++GF I+KE + +L ++ AS F  EH SRSF   L++ ++
Subjt:  GSMETEKTLAMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
AT1G17410.2 Nucleoside diphosphate kinase family protein9.5e-1045Show/hide
Query:  MVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS
        M+KPDG+ GNYT+ IK  ++++GF I+KE + +L ++ AS F  EH SRSF   L++ ++
Subjt:  MVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGAAAATTTTCTTTAACAAATCGTCTAATCCTACGGCTTCCCGTGATTTCCAAGTTACCGCCATCTTCTTCCTCGCAATCTCTCTCTCCCCTCATTCTGTACTG
CTTTCAACTTTCCCGCCATTACATTATTCTGCAACTGCTTCAGTTTCTGGCTCTTTCAACTCGGCTCTACGAATCGCAGACTCTGACATTTTTACTCGTTGTAACTTGTT
TTTCTTTTTTTGACCTTCTTCTTATTCACATAATAAATAATTCGTACAATATTGAATGGCGTGAATTTAGGTTCGCAAGTAATGGAAGTATGGAAACGGAGAAAACTTTG
GCTATGGTAAAACCAGATGGGTTGCATGGTAACTACACTGATATAATTAAACTGGCCATTTTGAAGTCAGGCTTCAGAATTTTGAAGGAAAGAATAATGGAATTGCATGA
AGATAGAGCAAGTCGCTTTTGTGCTGAACATTTGTCAAGAAGCTTCCTTTCTAGTCTGATTAGCCGTCTTAGTTATAGAGGACTGAAGTTAAAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGAAAATTTTCTTTAACAAATCGTCTAATCCTACGGCTTCCCGTGATTTCCAAGTTACCGCCATCTTCTTCCTCGCAATCTCTCTCTCCCCTCATTCTGTACTG
CTTTCAACTTTCCCGCCATTACATTATTCTGCAACTGCTTCAGTTTCTGGCTCTTTCAACTCGGCTCTACGAATCGCAGACTCTGACATTTTTACTCGTTGTAACTTGTT
TTTCTTTTTTTGACCTTCTTCTTATTCACATAATAAATAATTCGTACAATATTGAATGGCGTGAATTTAGGTTCGCAAGTAATGGAAGTATGGAAACGGAGAAAACTTTG
GCTATGGTAAAACCAGATGGGTTGCATGGTAACTACACTGATATAATTAAACTGGCCATTTTGAAGTCAGGCTTCAGAATTTTGAAGGAAAGAATAATGGAATTGCATGA
AGATAGAGCAAGTCGCTTTTGTGCTGAACATTTGTCAAGAAGCTTCCTTTCTAGTCTGATTAGCCGTCTTAGTTATAGAGGACTGAAGTTAAAG
Protein sequenceShow/hide protein sequence
MKRKFSLTNRLILRLPVISKLPPSSSSQSLSPLILYCFQLSRHYIILQLLQFLALSTRLYESQTLTFLLVVTCFSFFDLLLIHIINNSYNIEWREFRFASNGSMETEKTL
AMVKPDGLHGNYTDIIKLAILKSGFRILKERIMELHEDRASRFCAEHLSRSFLSSLISRLSYRGLKLK