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Carg13957 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13957
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMyb-like protein
Genome locationCarg_Chr08:4242636..4243854
RNA-Seq ExpressionCarg13957
SyntenyCarg13957
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593528.1 hypothetical protein SDJN03_13004, partial [Cucurbita argyrosperma subsp. sororia]2.9e-41100Show/hide
Query:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH
        MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH
Subjt:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH

XP_023000451.1 uncharacterized protein LOC111494718 isoform X1 [Cucurbita maxima]1.4e-3592.31Show/hide
Query:  MEDPKTQMKDSSS-EEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSN
        MEDPKT MKDSSS EEDA+SINIFERLKEE+EAVIHSHESP HHKETHGTS+DIDETTPADEVKAPG+FERVKEEIEALVETIHPKKDSSN
Subjt:  MEDPKTQMKDSSS-EEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSN

XP_023000452.1 uncharacterized protein LOC111494718 isoform X2 [Cucurbita maxima]5.7e-3793.33Show/hide
Query:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSN
        MEDPKT MKDSSSEEDA+SINIFERLKEE+EAVIHSHESP HHKETHGTS+DIDETTPADEVKAPG+FERVKEEIEALVETIHPKKDSSN
Subjt:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSN

XP_023515025.1 uncharacterized protein LOC111779175 isoform X1 [Cucurbita pepo subsp. pepo]8.8e-3894.57Show/hide
Query:  MEDPKTQMKDSSS-EEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH
        MEDPKT MKDSSS EEDARSINIFERLKEE+EAVIHSHESPRHHKETHGT DDIDETTPADEVKAPG+FERVKEEIEALVETIHPKKDSSNH
Subjt:  MEDPKTQMKDSSS-EEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH

XP_023515027.1 uncharacterized protein LOC111779175 isoform X2 [Cucurbita pepo subsp. pepo]3.6e-3995.6Show/hide
Query:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH
        MEDPKT MKDSSSEEDARSINIFERLKEE+EAVIHSHESPRHHKETHGT DDIDETTPADEVKAPG+FERVKEEIEALVETIHPKKDSSNH
Subjt:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH

TrEMBL top hitse value%identityAlignment
A0A0A0KAY9 Uncharacterized protein1.1e-2874.73Show/hide
Query:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH
        ME+ KT++K SSSE + +S NIFER KEE+EAVIH ++SPRHHKETHG SDDIDETTPADEVKAPG+F RVKEE+EALV  IHPKKDS +H
Subjt:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH

A0A6J1CRC8 uncharacterized protein LOC111014044 isoform X11.9e-3077.17Show/hide
Query:  MEDPKTQMKDSSSE-EDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH
        ME+PKT +KDSSSE +DA++ N+FER KEE+EA++HS++SPRHHKETHG SDDIDETTP+DEVKAPG+F RVKEEIEALV TIHPKKDS NH
Subjt:  MEDPKTQMKDSSSE-EDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH

A0A6J1CT17 uncharacterized protein LOC111014044 isoform X25.1e-3176.92Show/hide
Query:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH
        ME+PKT +KDSSS +DA++ N+FER KEE+EA++HS++SPRHHKETHG SDDIDETTP+DEVKAPG+F RVKEEIEALV TIHPKKDS NH
Subjt:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH

A0A6J1KDN6 uncharacterized protein LOC111494718 isoform X22.8e-3793.33Show/hide
Query:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSN
        MEDPKT MKDSSSEEDA+SINIFERLKEE+EAVIHSHESP HHKETHGTS+DIDETTPADEVKAPG+FERVKEEIEALVETIHPKKDSSN
Subjt:  MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSN

A0A6J1KFX0 uncharacterized protein LOC111494718 isoform X16.8e-3692.31Show/hide
Query:  MEDPKTQMKDSSS-EEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSN
        MEDPKT MKDSSS EEDA+SINIFERLKEE+EAVIHSHESP HHKETHGTS+DIDETTPADEVKAPG+FERVKEEIEALVETIHPKKDSSN
Subjt:  MEDPKTQMKDSSS-EEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17490.1 unknown protein4.1e-0945.59Show/hide
Query:  NIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDS
        N+    KEE E++ H        KETHG S+DIDE T  D+VK PG+  R+ EE+EA+V+ + P K S
Subjt:  NIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDS

AT1G72690.1 unknown protein4.9e-1857.32Show/hide
Query:  KDSSSEEDARSINIFERLKEEVEAVIHSHES-PRHH-KETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDS
        ++ S E+  +S N+FER+KEE+EA+ H  +S  RHH KETHGTSDDIDE+TP D VK PG F+R+KEEIEA+   + PK+ S
Subjt:  KDSSSEEDARSINIFERLKEEVEAVIHSHES-PRHH-KETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDS

AT5G57000.1 unknown protein2.3e-1546.51Show/hide
Query:  KTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPR----HHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKK
        K + K    E+  +  N+ ++ +E+++++    + PR    HHKETHG SDDI E TP DEVKAP + ER KEEIEA+++TIH KK
Subjt:  KTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPR----HHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKK

AT5G57000.2 unknown protein2.5e-1447.13Show/hide
Query:  KTQMKDSSSEEDA-RSINIFERLKEEVEAVIHSHESPR----HHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKK
        K +M+  S + D  +  N+ ++ +E+++++    + PR    HHKETHG SDDI E TP DEVKAP + ER KEEIEA+++TIH KK
Subjt:  KTQMKDSSSEEDA-RSINIFERLKEEVEAVIHSHESPR----HHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCCAAAGACTCAGATGAAAGATTCTTCTTCAGAAGAAGATGCAAGATCGATCAATATTTTTGAGAGACTTAAAGAAGAGGTGGAGGCTGTGATTCACTCTCA
TGAATCACCACGCCATCACAAAGAAACACATGGAACAAGCGATGATATTGACGAGACTACACCAGCCGATGAAGTAAAGGCCCCCGGCATGTTTGAAAGAGTCAAGGAAG
AGATTGAGGCCCTCGTGGAAACGATTCATCCCAAGAAGGATTCGAGCAATCATTAG
mRNA sequenceShow/hide mRNA sequence
AGCGAGCAGACACAAGAGTGAGACGGGGTTAATCGATTCCACGGGAAAGCTCGAATGGAGGATCCAAAGACTCAGATGAAAGATTCTTCTTCAGAAGAAGATGCAAGATC
GATCAATATTTTTGAGAGACTTAAAGAAGAGGTGGAGGCTGTGATTCACTCTCATGAATCACCACGCCATCACAAAGAAACACATGGAACAAGCGATGATATTGACGAGA
CTACACCAGCCGATGAAGTAAAGGCCCCCGGCATGTTTGAAAGAGTCAAGGAAGAGATTGAGGCCCTCGTGGAAACGATTCATCCCAAGAAGGATTCGAGCAATCATTAG
CTTTCTTTAAAGCAAGGAAGAGGGTTGATTGACACCATGCTGTTACAAGGTTTGCTTTCTTTAACAATGCTTAATTTCTTTTATGATGCAACTCCATGCTATCTAGGTCG
CTATTTGAAAATATTGGTCGGAAAATATCATGTTTGAAGACAAATTGACATGAACTTAGACTATTTCCACTGTTTCTGGTATTTGTTTTGAAGTATGTAATGTACATCTT
GTCAAATTATCCCCAATATTAGGCCACACATTCTAGCCTTAATTTGAAAG
Protein sequenceShow/hide protein sequence
MEDPKTQMKDSSSEEDARSINIFERLKEEVEAVIHSHESPRHHKETHGTSDDIDETTPADEVKAPGMFERVKEEIEALVETIHPKKDSSNH