; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13958 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13958
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationCarg_Chr08:4235115..4237387
RNA-Seq ExpressionCarg13958
SyntenyCarg13958
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005516 - calmodulin binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593527.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]2.4e-18995.91Show/hide
Query:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSG            KLFVGGVSWETTEETFSDYFSKYGEIA
Subjt:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
        DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK

Query:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
        RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFG YGGNYANFYGAY
Subjt:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY

Query:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY
        NYGFGYGGPMYINGI RYGMTGYGVPNCYGCTMAERYHPYWY
Subjt:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY

KAG7025871.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-200100Show/hide
Query:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
Subjt:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
        DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK

Query:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
        RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
Subjt:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY

Query:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY
        NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY
Subjt:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY

XP_022964368.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]1.1e-18995.91Show/hide
Query:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSG            KLFVGGVSWETTEETFSDYFSKYGEIA
Subjt:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
        DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTN+KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK

Query:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
        RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
Subjt:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY

Query:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY
        NYGFGYGGPMYINGI RYGMTGYGVPNCYGCTMAERYHPYWY
Subjt:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY

XP_023000106.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima]1.1e-17690.35Show/hide
Query:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        MAEEKN NAD+NAYH GDGA+QMYDQQD+FELGSELEGGNADSTGGEVKHST HYDSSSSG            KLFVGGVSWETTEETF+ YFSKYGEIA
Subjt:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
        DSVIMMDKHTGRPRGFGFVTFCDPSVADMVL KDHVIDGRTVEVKRTVPRAD N+KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDY+TK
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK

Query:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
        RSRGFGFITFENED+VESIFAGNEKHELGGKQVEIKKAIPRRVSYDS+SNNTAAPPSSGYG+YKC GLYDDKMGRPF  YDVYAPFGGYGGNYANFYGAY
Subjt:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY

Query:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY
        +YGFGYGGPMY+NGI RYGMTGYGVPNCYGCTMAERYHPYWY
Subjt:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY

XP_023514818.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita pepo subsp. pepo]5.4e-18995.61Show/hide
Query:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSG            KLFVGGVSWETTEETFSDYFSKYGEIA
Subjt:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
        DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTN+KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK

Query:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
        RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
Subjt:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY

Query:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY
        NYGFGYGGPMYINGI RYGMTGYGVP CYGCTMAERYHPYWY
Subjt:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY

TrEMBL top hitse value%identityAlignment
A0A0A0K9M1 Uncharacterized protein5.2e-12967.61Show/hide
Query:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        MA E+++N D NA + G+   QMYDQQ +F++G+ELE  N DST  E+K+ST+ YDSSSSG            KLFVGGV+WETTE+TF DYFSKYGEIA
Subjt:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
        DSVIM+DKHTGRPRGFGFVTFCDP++ADMVL  DH+IDGR VEVKRTVPRAD N+K+VSRTKKIFVGGIPP LTE+ FK YFSSFG I EHQIMIDY+TK
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK

Query:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
        RSRGFGFITFENED+VE+IF+G+  HELGGKQVEIKKA+P+RV+YD +SN   +  +SGY MY+C GLYDD +G  FG YD+YAP+GG+G NYA+FYGAY
Subjt:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY

Query:  NYGFGYGGPMYINGISRYGMTGYGVP------NCY-------GCTMAERYHPYWY
        NYGFGYG  MY+NG  RYGM GYG P      N Y       G +M ER+HPYWY
Subjt:  NYGFGYGGPMYINGISRYGMTGYGVP------NCY-------GCTMAERYHPYWY

A0A5A7UU27 Heterogeneous nuclear ribonucleoprotein a12.6e-12866.95Show/hide
Query:  MAEEKNFNADHNAYHG--GDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGE
        MAEE+++N D N  HG  G   +Q  +QQ++F++ +ELE  N DST  E+K+ST+ YDSSSSG            KLFVGGV+WETTE+TFSDYFSKYGE
Subjt:  MAEEKNFNADHNAYHG--GDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGE

Query:  IADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYR
        IADSVIM+DKHTGRPRGFGFVTFCDP++ADMVL  DH+IDGR VEVKRTVPRAD N+K+VSRTKKIFVGGIPP LTE  FK YFSSFG I EHQIMIDY+
Subjt:  IADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYR

Query:  TKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYG
        TKRSRGFGFITFENED+V++IF+G+  HELGGKQVEIKKA+P++V+YD +SN  +   SSGY MY+C GLYDD +G  FG YD+YAP+GG+GGNYA+FYG
Subjt:  TKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYG

Query:  AYNYGFGYGGPMYINGISRYGMTGYGVP------NCY-------GCTMAERYHPYWY
        AYNYGFGYG  MY+NG  RYGM GYG P      N Y       G +M ER+HPYWY
Subjt:  AYNYGFGYGGPMYINGISRYGMTGYGVP------NCY-------GCTMAERYHPYWY

A0A5D3BYF2 Heterogeneous nuclear ribonucleoprotein a12.6e-12866.95Show/hide
Query:  MAEEKNFNADHNAYHG--GDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGE
        MAEE+++N D N  HG  G   +Q  +QQ++F++ +ELE  N DST  E+K+ST+ YDSSSSG            KLFVGGV+WETTE+TFSDYFSKYGE
Subjt:  MAEEKNFNADHNAYHG--GDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGE

Query:  IADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYR
        IADSVIM+DKHTGRPRGFGFVTFCDP++ADMVL  DH+IDGR VEVKRTVPRAD N+K+VSRTKKIFVGGIPP LTE  FK YFSSFG I EHQIMIDY+
Subjt:  IADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYR

Query:  TKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYG
        TKRSRGFGFITFENED+V++IF+G+  HELGGKQVEIKKA+P++V+YD +SN  +   SSGY MY+C GLYDD +G  FG YD+YAP+GG+GGNYA+FYG
Subjt:  TKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYG

Query:  AYNYGFGYGGPMYINGISRYGMTGYGVP------NCY-------GCTMAERYHPYWY
        AYNYGFGYG  MY+NG  RYGM GYG P      N Y       G +M ER+HPYWY
Subjt:  AYNYGFGYGGPMYINGISRYGMTGYGVP------NCY-------GCTMAERYHPYWY

A0A6J1HKL5 heterogeneous nuclear ribonucleoprotein 15.3e-19095.91Show/hide
Query:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSG            KLFVGGVSWETTEETFSDYFSKYGEIA
Subjt:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
        DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTN+KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK

Query:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
        RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
Subjt:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY

Query:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY
        NYGFGYGGPMYINGI RYGMTGYGVPNCYGCTMAERYHPYWY
Subjt:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY

A0A6J1KEY7 heterogeneous nuclear ribonucleoprotein 1-like5.1e-17790.35Show/hide
Query:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        MAEEKN NAD+NAYH GDGA+QMYDQQD+FELGSELEGGNADSTGGEVKHST HYDSSSSG            KLFVGGVSWETTEETF+ YFSKYGEIA
Subjt:  MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK
        DSVIMMDKHTGRPRGFGFVTFCDPSVADMVL KDHVIDGRTVEVKRTVPRAD N+KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDY+TK
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTK

Query:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY
        RSRGFGFITFENED+VESIFAGNEKHELGGKQVEIKKAIPRRVSYDS+SNNTAAPPSSGYG+YKC GLYDDKMGRPF  YDVYAPFGGYGGNYANFYGAY
Subjt:  RSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAY

Query:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY
        +YGFGYGGPMY+NGI RYGMTGYGVPNCYGCTMAERYHPYWY
Subjt:  NYGFGYGGPMYINGISRYGMTGYGVPNCYGCTMAERYHPYWY

SwissProt top hitse value%identityAlignment
O94432 Uncharacterized RNA-binding protein C660.153.3e-4042.13Show/hide
Query:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPAL
        K+F+GG++WETT+++  DYF ++GE+ D  +M D  TGR RGFGF+TF +P   + V++K+H +DG+ ++ KR +PR +       +T K+FVGG+P   
Subjt:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPAL

Query:  TEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNN
        TE+ F+ +F+ FG + +  +M+D  T R RGFGF+T+ENE AVE+  +      + GK VE+K+A P+    DSH  +
Subjt:  TEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNN

Q8W034 Heterogeneous nuclear ribonucleoprotein 12.5e-4842.11Show/hide
Query:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRAD------TNNKLVSR-------
        KLFVGG+SWET E+   ++F+ YGE++ +++M DK TGRPRGFGFV F DPSV D VL + H ID R V+VKR + R +      T N   SR       
Subjt:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRAD------TNNKLVSR-------

Query:  --TKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSS
          TKKIFVGG+PP LT++ F+ YF  +G +T+  IM D  T R RGFGF++F++EDAV+S+      H+L GKQVE+K+A+P+  +      +     S 
Subjt:  --TKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSS

Query:  GY-GMYKCEGLYDDKMGRPFGRYDVYAPFG---------GYGGNYANFYGAYNYGFGYGGPMYINGISRYG---MTGYGVPNCYG
        GY G    E  YD +M     R+  +   G         GYG  Y N      YG  YGG  Y      YG     GYG  N  G
Subjt:  GY-GMYKCEGLYDDKMGRPFGRYDVYAPFG---------GYGGNYANFYGAYNYGFGYGGPMYINGISRYG---MTGYGVPNCYG

Q920Q6 RNA-binding protein Musashi homolog 22.2e-3946.82Show/hide
Query:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNK-DHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPA
        K+F+GG+SW+T+ ++  DYFSK+GEI + ++M D  T R RGFGFVTF DP+  D VL +  H +D +T++ K   PR     K+V+RTKKIFVGG+   
Subjt:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNK-DHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPA

Query:  LTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSY
           +  K YF  FG + +  +M D  T R RGFGF+TFENED VE +      HE+  K VE KKA P+ V +
Subjt:  LTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSY

Q96DH6 RNA-binding protein Musashi homolog 22.2e-3946.82Show/hide
Query:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNK-DHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPA
        K+F+GG+SW+T+ ++  DYFSK+GEI + ++M D  T R RGFGFVTF DP+  D VL +  H +D +T++ K   PR     K+V+RTKKIFVGG+   
Subjt:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNK-DHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPA

Query:  LTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSY
           +  K YF  FG + +  +M D  T R RGFGF+TFENED VE +      HE+  K VE KKA P+ V +
Subjt:  LTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSY

Q9VVE5 RNA-binding protein Musashi homolog Rbp66.7e-4142.86Show/hide
Query:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNK-DHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPA
        K+F+GG+SW+T+ E+  DYF +YG+I+++++M D  T R RGFGFVTF DP+  D VL +  H +DG+ V+ K   PR   + K+V+RTKKIFVGG+   
Subjt:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNK-DHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPA

Query:  LTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDK
         T +  K YF  FG I +  +M D +T R RGFGF+TF++ED V+ +      HE+  K VE KKA P+ V   ++   T A   S Y      GL    
Subjt:  LTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDK

Query:  MGRPFGRYDVYAPFGGYGGNYANF
         G P   Y  YA   GY G Y +F
Subjt:  MGRPFGRYDVYAPFGGYGGNYANF

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.9e-7347.71Show/hide
Query:  DHNAYHGGDGAV--QMYDQ---QDRFEL---GSELEGGNADSTGG-EVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA
        D+N+  G D +    ++D+   Q  FE+        GG A  TGG ++KHS  H  SSSS  S          KLFVGGVSWETT ETF++YF K+GE+ 
Subjt:  DHNAYHGGDGAV--QMYDQ---QDRFEL---GSELEGGNADSTGG-EVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIA

Query:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRA--DTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYR
        DSVIM D+ TG PRGFGFVTF D +VA+ VL +DHVID R V++KRT+PR   DT+ K VS+T+KIFVGG+PP L ED  K YF  +G I EHQIM D+ 
Subjt:  DSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRA--DTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYR

Query:  TKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGG-------
        T RSRGFGF+TF+ ED+V+ +F+  + HELG KQVEIK+A P+R   D+   +  A      G Y  E  Y  K    +  Y  Y  +GGYG        
Subjt:  TKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGG-------

Query:  NYANFY---GAYNYGFGYGGPMYINGISRYGMTGYG-VPNCYGCTMAERY
        N A FY   G Y YG+GYGG M+  G   YG  GY  + + YG   A  Y
Subjt:  NYANFY---GAYNYGFGYGGPMYINGISRYGMTGYG-VPNCYGCTMAERY

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.3e-5444.09Show/hide
Query:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPR-ADTNNKLVSRTKKIFVGGIPPA
        K+F+GG+  +TT   F+ +F KYGEI DSVIM D+HTG+PRGFGF+TF DPSV D V+   HVI+G+ VE+KRT+P+ A  N     +TKKIFVGGIP  
Subjt:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPR-ADTNNKLVSRTKKIFVGGIPPA

Query:  LTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRR------VSYDSHSNNTAAPPS-SGYGMYKC
        +TED  K +F+ +G + EHQ++ D+ T RSRGFGF+ F++E+ V+ + +     ++   QVEIKKA P++       SY SH    ++  S + YG    
Subjt:  LTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRR------VSYDSHSNNTAAPPS-SGYGMYKC

Query:  EGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAYNYGFGYGGPMYINGISRYG
         G +D   G P G      P   +GG  + + G Y YG G  GP +  G + YG
Subjt:  EGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAYNYGFGYGGPMYINGISRYG

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.2e-5047.57Show/hide
Query:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADT------------------NN
        KLF+GG+SW+T EE   +YF KYG++ ++VIM D+ TGR RGFGF+ F DPSVA+ V+   H+IDGRTVE K+ VPR D                    N
Subjt:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADT------------------NN

Query:  KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAP
           +RTKKIFVGG+P ++TE  FK YF  FGTI +  +M D+ T+R RGFGFITF++E++V+ +      HEL GK VE+K+A+P+ +S    S      
Subjt:  KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAP

Query:  PSSGYG
        P  GYG
Subjt:  PSSGYG

AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.2e-5047.57Show/hide
Query:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADT------------------NN
        KLF+GG+SW+T EE   +YF KYG++ ++VIM D+ TGR RGFGF+ F DPSVA+ V+   H+IDGRTVE K+ VPR D                    N
Subjt:  KLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADT------------------NN

Query:  KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAP
           +RTKKIFVGG+P ++TE  FK YF  FGTI +  +M D+ T+R RGFGFITF++E++V+ +      HEL GK VE+K+A+P+ +S    S      
Subjt:  KLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAP

Query:  PSSGYG
        P  GYG
Subjt:  PSSGYG

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-5445.98Show/hide
Query:  ASKLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPP
        A K+FVGG++ ETT   F  +F KYGEI DSVIM D+ TG+PRGFGFVT+ D SV D V+  +H+I G+ VE+KRT+PR   ++    +TKKIFVGGIP 
Subjt:  ASKLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPP

Query:  ALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDD
        ++ +D FK +F  FG + EHQIM D+ T RSRGFGF+T+E+ED V+ + A   + EL G QVEIKKA P++ +  +  +       S +G    +G    
Subjt:  ALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIFAGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDD

Query:  KMGRPFGRYDVYAPFGGYGGNYANFYGAYNYGF-GYGGPMYINGISRY-GMTGYGVPNCYG
          G   G    Y   GGYGG  +  YG Y   F GYGG  Y  G+  Y G    G    YG
Subjt:  KMGRPFGRYDVYAPFGGYGGNYANFYGAYNYGF-GYGGPMYINGISRY-GMTGYGVPNCYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAAAAGAATTTCAATGCCGACCATAACGCTTACCATGGCGGCGACGGTGCCGTCCAAATGTACGATCAGCAGGATCGGTTTGAATTGGGGAGTGAATTGGA
AGGAGGCAATGCAGATAGTACAGGAGGTGAAGTAAAGCATTCGACGAGCCATTATGATTCTTCCTCCAGTGGTTGGAGCATAACGTTTGACCTTTTCTTATTTGCTAGCA
AGCTTTTCGTTGGAGGCGTTTCTTGGGAGACCACTGAAGAGACCTTTAGTGATTACTTTAGCAAGTATGGAGAAATAGCTGATTCAGTTATAATGATGGACAAACACACT
GGAAGGCCACGCGGGTTTGGTTTTGTAACGTTTTGTGATCCTTCAGTTGCTGACATGGTTCTGAATAAAGACCATGTTATAGATGGCAGAACGGTGGAAGTGAAGAGAAC
AGTTCCGAGGGCTGATACGAACAATAAATTGGTATCAAGAACAAAGAAAATTTTTGTTGGTGGAATTCCACCTGCTTTGACTGAAGATGCGTTTAAGGTCTACTTCTCTT
CGTTTGGTACTATTACCGAACACCAAATCATGATAGACTATAGAACGAAGCGGTCTAGAGGATTTGGGTTTATAACTTTTGAGAACGAAGATGCAGTTGAAAGTATATTC
GCTGGAAACGAAAAACATGAGCTTGGAGGCAAGCAGGTGGAAATCAAGAAGGCTATACCAAGAAGAGTTTCTTATGATTCACATAGTAACAATACTGCAGCACCACCTTC
TTCAGGATATGGCATGTATAAATGTGAAGGCTTATATGATGATAAAATGGGCAGACCTTTTGGACGGTATGATGTATATGCACCCTTTGGCGGGTACGGTGGAAACTATG
CCAATTTCTATGGTGCATACAATTACGGTTTTGGTTATGGTGGCCCGATGTATATAAACGGTATCAGTAGATATGGGATGACTGGTTACGGTGTCCCCAATTGCTATGGT
TGTACAATGGCTGAAAGATACCATCCATATTGGTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAGAAAAGAATTTCAATGCCGACCATAACGCTTACCATGGCGGCGACGGTGCCGTCCAAATGTACGATCAGCAGGATCGGTTTGAATTGGGGAGTGAATTGGA
AGGAGGCAATGCAGATAGTACAGGAGGTGAAGTAAAGCATTCGACGAGCCATTATGATTCTTCCTCCAGTGGTTGGAGCATAACGTTTGACCTTTTCTTATTTGCTAGCA
AGCTTTTCGTTGGAGGCGTTTCTTGGGAGACCACTGAAGAGACCTTTAGTGATTACTTTAGCAAGTATGGAGAAATAGCTGATTCAGTTATAATGATGGACAAACACACT
GGAAGGCCACGCGGGTTTGGTTTTGTAACGTTTTGTGATCCTTCAGTTGCTGACATGGTTCTGAATAAAGACCATGTTATAGATGGCAGAACGGTGGAAGTGAAGAGAAC
AGTTCCGAGGGCTGATACGAACAATAAATTGGTATCAAGAACAAAGAAAATTTTTGTTGGTGGAATTCCACCTGCTTTGACTGAAGATGCGTTTAAGGTCTACTTCTCTT
CGTTTGGTACTATTACCGAACACCAAATCATGATAGACTATAGAACGAAGCGGTCTAGAGGATTTGGGTTTATAACTTTTGAGAACGAAGATGCAGTTGAAAGTATATTC
GCTGGAAACGAAAAACATGAGCTTGGAGGCAAGCAGGTGGAAATCAAGAAGGCTATACCAAGAAGAGTTTCTTATGATTCACATAGTAACAATACTGCAGCACCACCTTC
TTCAGGATATGGCATGTATAAATGTGAAGGCTTATATGATGATAAAATGGGCAGACCTTTTGGACGGTATGATGTATATGCACCCTTTGGCGGGTACGGTGGAAACTATG
CCAATTTCTATGGTGCATACAATTACGGTTTTGGTTATGGTGGCCCGATGTATATAAACGGTATCAGTAGATATGGGATGACTGGTTACGGTGTCCCCAATTGCTATGGT
TGTACAATGGCTGAAAGATACCATCCATATTGGTATTGAGCAATCTTTACCTAGATGGTTTCTACTATGAAGAAAGTGATGATTGATTTTGACCAGGAGCACAAATATCC
ATCCATCTTAGTAGCTGTGCAGTTCGAGATTTTTTCGGTGTAATATAATCGATGACGATCTTCTCTTTATTATTATTGTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MAEEKNFNADHNAYHGGDGAVQMYDQQDRFELGSELEGGNADSTGGEVKHSTSHYDSSSSGWSITFDLFLFASKLFVGGVSWETTEETFSDYFSKYGEIADSVIMMDKHT
GRPRGFGFVTFCDPSVADMVLNKDHVIDGRTVEVKRTVPRADTNNKLVSRTKKIFVGGIPPALTEDAFKVYFSSFGTITEHQIMIDYRTKRSRGFGFITFENEDAVESIF
AGNEKHELGGKQVEIKKAIPRRVSYDSHSNNTAAPPSSGYGMYKCEGLYDDKMGRPFGRYDVYAPFGGYGGNYANFYGAYNYGFGYGGPMYINGISRYGMTGYGVPNCYG
CTMAERYHPYWY