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Carg13962 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13962
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein, putative
Genome locationCarg_Chr08:4222075..4222281
RNA-Seq ExpressionCarg13962
SyntenyCarg13962
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059427.1 hypothetical protein E6C27_scaffold242G001540 [Cucumis melo var. makuwa]4.2e-1691.18Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA G+KQ+QKDDSK HSP+
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
KAE8646513.1 hypothetical protein Csa_016818 [Cucumis sativus]4.2e-1691.18Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA G+KQ+QKDDSK HSP+
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
KAG6593524.1 hypothetical protein SDJN03_13000, partial [Cucurbita argyrosperma subsp. sororia]2.5e-21100Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
KAG7025867.1 hypothetical protein SDJN02_12365, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-21100Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
XP_038900241.1 uncharacterized protein LOC120087330 [Benincasa hispida]8.4e-1789.71Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA GSKQ+QK+DS +HSP+
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
TrEMBL top hitse value%identityAlignment
A0A5A7UXR8 Uncharacterized protein2.0e-1691.18Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA G+KQ+QKDDSK HSP+
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
A0A6J1CPT9 uncharacterized protein LOC1110136201.3e-1589.71Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        M VKPTVALRAVLVGGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA GSKQ+QKDDSK H P+
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
A0A6J1GSG6 uncharacterized protein LOC1114565691.3e-1588.24Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MA+KPTVALRAVLVGGIAAFAKIAGAMKAAGG K+GAATAAMTAAATAALA GSKQ+QKDDSK H P+
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
A0A6J1JXL7 uncharacterized protein LOC1114887601.0e-1589.71Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGG K+GAATAAMTAAATAALA GSKQ+QKDDSK H P+
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
E5GCB3 Uncharacterized protein3.4e-1689.71Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVLVGGIAAFAK+AGAMKAAGGAK+GAATAAMTAAATAALA G+KQ+QKDDSK HSP+
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13845.1 unknown protein2.2e-1568.66Show/hide
Query:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSP
        M+VKPTVALR +LVGG+A FAK+A AMKAAGG K+GAA  AMT AATAA++GGSKQ+QK D+ +  P
Subjt:  MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAAAACCAACTGTTGCGTTGCGAGCTGTACTTGTTGGAGGAATTGCAGCGTTTGCTAAAATTGCTGGTGCGATGAAAGCTGCAGGTGGTGCAAAGATAGGTGC
AGCCACAGCTGCCATGACAGCAGCAGCAACTGCAGCTTTGGCAGGAGGATCAAAACAGGAGCAGAAGGATGATTCTAAACAACACTCTCCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAAAACCAACTGTTGCGTTGCGAGCTGTACTTGTTGGAGGAATTGCAGCGTTTGCTAAAATTGCTGGTGCGATGAAAGCTGCAGGTGGTGCAAAGATAGGTGC
AGCCACAGCTGCCATGACAGCAGCAGCAACTGCAGCTTTGGCAGGAGGATCAAAACAGGAGCAGAAGGATGATTCTAAACAACACTCTCCACAATGA
Protein sequenceShow/hide protein sequence
MAVKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ